Labshake search
Citations for Illumina :
151 - 200 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2024Quote: Illumina NovaSeq 6000 system (Illumina)
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bioRxiv - Genomics 2024Quote: RNA sequencing libraries were prepared using the TruSeq RNA Library Preparation Kit v2 (Illumina), according to manufacturer’s instructions ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Individual whole-genome libraries were prepared using the TruSeq DNA PCR-Free kit (Illumina). Libraries were quantified by qPCR using the KAPA Library Quantification Kit ...
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bioRxiv - Evolutionary Biology 2024Quote: The extracted DNA was fragmented by sonication with a Q800R2 Sonicator (Illumina TruSeq), using 50 uL of the DNA extractions in 0.2 mL strip tubes ...
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bioRxiv - Evolutionary Biology 2024Quote: ... the libraries were prepared using a DNA Prep Tagmentation kit and IDT (UD) indexes (Illumina, Hayward, CA, USA). The libraries were sequenced at the NGI on an Illumina MiniSeq platform with a 2x150 bp paired-end setup using a MiniSeq Mid Output kit ...
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bioRxiv - Evolutionary Biology 2024Quote: ... We followed the TruSeq Nano DNA library prep standard protocol to generate libraries with a 350 base pair insert size for whole-genome paired-end sequencing (Illumina, San Diego, California, USA). We validated the fragment length distribution of the libraries with a fragment analyser (Agilent Technologies ...
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bioRxiv - Evolutionary Biology 2024Quote: ... All other samples were prepared using an DNA Flex library kit (Illumina, Hayward,CA, USA) and sequenced on an Illumina NovaSeq6000 ...
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bioRxiv - Evolutionary Biology 2024Quote: ... DNA extracts were sent to Novogene UK for library preparation and whole genome sequencing at 5X on the Illumina Novaseq 6000 platform (Illumina, San Diego) using paired-end 150bp sequencing reads.
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bioRxiv - Evolutionary Biology 2024Quote: ... and sequenced by Illumina NovaSeq technology (paired-end) ...
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bioRxiv - Evolutionary Biology 2024Quote: ... and high-throughput sequencing libraries were synthesized utilizing the Nextera DNA Flex Library Prep Kit (Illumina, San Diego, CA, USA). Subsequently ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Prepared DNA has then been sequenced in paired-ends on our in-lab sequencer (iSeq100; Illumina).
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bioRxiv - Evolutionary Biology 2024Quote: ... Libraries were prepared using TruSeq stranded mRNA kit (Illumina, San Diego CA, USA), and sequencing was performed on an Illumina Novaseq6000 machine producing 40 million reads 2*100PE ...
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bioRxiv - Evolutionary Biology 2024Quote: ... We also re-sequenced male and female gDNA using Illumina (Illumina, San Diego, CA, USA) to correct long reads and perform coverage analyses.
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bioRxiv - Evolutionary Biology 2024Quote: ... The surviving SH3 mutants in each experiment were detected by Illumina sequencing ...
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bioRxiv - Evolutionary Biology 2024Quote: ... We sequenced the final pool in one lane at Novogene (Sacramento, CA, U.S.A.) on Illumina HiSeq 150 cycle Paired-End Sequencing v4 runs (Illumina, San Diego, CA, U.S.A.), along with other enriched libraries for unrelated projects ...
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bioRxiv - Evolutionary Biology 2024Quote: ... libraries were built using the TruSeq DNA Nano200 preparation kit (Illumina).
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bioRxiv - Evolutionary Biology 2024Quote: ... a 350-bp insert size library was constructed and sequenced on the NovaSeq 6000 platform (Illumina, San Diego, CA) in 150 paired-end (PE ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Paired-end sequencing with a 2×250 bp read length was performed at the Bio-Environment platform (University of Perpignan Via Domitia Perpignan, France) on a MiSeq system (Illumina) using v2 chemistry according to the manufacturer’s protocol ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Equal amounts of each library were combined and sent to the Genomic Analysis Platform (CHUL, Quebec, Canada) for paired-end 250 bp sequencing on a NovaSeq (Illumina).
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bioRxiv - Evolutionary Biology 2024Quote: ... on the NovaSeq platform (Illumina). All PCR reactions were done using KAPA HiFi HotStart ReadyMix (Roch ...
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bioRxiv - Evolutionary Biology 2024Quote: ... The surviving SH3 mutants in each experiment were detected by Illumina sequencing ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Equal amounts of each library were combined and sent to the Genomic Analysis Platform (CHUL, Quebec, Canada) for pair-end 250 bp sequencing on a NovaSeq (Illumina).
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bioRxiv - Evolutionary Biology 2024Quote: ... Genotypes were called using Illumina’s Genome Studio Genotyping Module v 2.0.5 (Illumina, 2016). Filtering criteria included a SNP call frequency > 0.85 ...
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bioRxiv - Evolutionary Biology 2024Quote: ... we merged the paired-end reads that resulted from Illumina sequencing ...
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bioRxiv - Evolutionary Biology 2024Quote: ... The RNA-seq protocols of fat and diencephalon tissues were based on the methods of rRNA-depletion and strand-specific RNA-seq provided by Illumina (Illumina, San Diego, CA). The sequencing for CUT&Tag and RNA-seq was performed with the Illumina NovaSeq6000 (PE150 ...
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bioRxiv - Genomics 2024Quote: ... 2.20.0 (Illumina). The obtained paired-end sequencing data were imported into CLC Genomics Workbench (Qiagen ...
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bioRxiv - Genomics 2024Quote: NovaSeq S4 35 cycle reagent kit (Illumina, San Diego, CA, USA)
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bioRxiv - Evolutionary Biology 2024Quote: ... Construction of DNA libraries was performed by the Michigan Department of Health and Human Services using the Nextera XT library prep kit (Illumina, San Diego, CA, USA) followed by sequencing on the MiSeq (Illumina ...
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bioRxiv - Evolutionary Biology 2024Quote: ... RNA-Seq evidence was provided by Illumina paired-end and single-end RNA-seq ...
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bioRxiv - Evolutionary Biology 2024Quote: ... The RNA-seq protocols of fat and diencephalon tissues were based on the methods of rRNA-depletion and strand-specific RNA-seq provided by Illumina (Illumina, San Diego, CA). The sequencing for CUT&Tag and RNA-seq was performed with the Illumina NovaSeq6000 (PE150 ...
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bioRxiv - Developmental Biology 2024Quote: ... pair-end sequencing was performed on the Illumina platform (Illumina, CA, USA).
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bioRxiv - Evolutionary Biology 2024Quote: ... on a 2x150 bp SP line on an Illumina NovaSeq sequencer (Illumina, San Diego, CA, USA) at the GenomiX platform in Montpellier ...
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bioRxiv - Developmental Biology 2024Quote: ... The DNA extracted from these samples was used for subsequent library construction using the TruSeq Nano DNA LT Library Preparation Kit (Illumina Inc., USA) whose purity and size were validated using an Agilent Bioanalyzer 2100 (Agilent Technologies ...
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bioRxiv - Developmental Biology 2024Quote: ... and sequenced using a Hiseq 1500 (Illumina) to obtain 2 × 127 base-pair (bp ...
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bioRxiv - Developmental Biology 2024Quote: ... cDNA library preparation and sequencing (Illumina Novaseq SP, 2 × 50 bp read length). Differential expression was filtered by selecting transcripts with fold change ≥ |1.5| and a significance level of P ≤ 0.05 using PartekFlow.
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bioRxiv - Genomics 2024Quote: ... Equimolar pooling of libraries was performed based on QC values and sequenced on an Illumina® NovaSeq S4 (Illumina, California, USA) with a read length configuration of 150 PE for 50 M PE reads per sample (25M in each direction).
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bioRxiv - Immunology 2024Quote: ... and a sequencing library was created with the Nextera XT method (FC-131-1096, Illumina). Libraries were sequenced on Illumina HiSeq4000 and resulting reads were aligned to ensembl build GRCm38.78 with STAR (v2.4.2a) ...
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bioRxiv - Genetics 2024Quote: ... Ribosomal RNA was depleted from samples using Ribo-Zero Plus rRNA Depletion Kit (Illumina) and purified using RNA Clean & Concentrator - 5 Kit ...
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bioRxiv - Genomics 2024Quote: ... it enables the observation of all variable sequence elements (spacers, iBARs, and the middle tRNA) with 150-cycle sequencing kits (e.g. Illumina MS-102-3001) and positions spacers and iBARs as early as possible within NGS reads ...
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bioRxiv - Genetics 2024Quote: ... Sequencing was conducted on a Nextseq instrument (Illumina Inc.) according to the manufacturer’s instructions ...
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bioRxiv - Genetics 2024Quote: ... RNA-Seq libraries were generated using the TruSeq RNA Sample Prep Kit (Illumina, San Diego, CA). Low-quality bases were trimmed using Trim-galore ...
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bioRxiv - Genomics 2024Quote: ... Sequencing was performed on an Illumina® NovaSeq (Illumina, California, USA) with a read length configuration of 150 PE for 40M PE reads 20M in each direction ...
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bioRxiv - Genomics 2024Quote: DRAGEN (Dynamic Read Analysis for GENomics) is a bioinformatics platform developed by Illumina that is designed to accelerate and improve the analysis of genomic sequencing data ...
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bioRxiv - Genomics 2024Quote: ... We evaluated all the SV call sets based on HG002 only using Witty.er (v0.3.5.1) with default config file provided in github repo (https://github.com/Illumina/witty.er) and -em SimpleCounting parameters ...
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bioRxiv - Genomics 2024Quote: The DRAGEN Structural Variant (SV) Caller is designed to detect structural variants (SV) and indel calls (50bp or larger by default) from Illumina data ...
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bioRxiv - Genomics 2024Quote: The chromatin conformation capture (Hi-C) fragment libraries were constructed from 300-700 bp insert size and were measured by Illumina platform for auxiliary assembly (Rao et al. ...
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bioRxiv - Genomics 2024Quote: ... R2:75 cycles” on a NextSeq 500 sequencer (Illumina, San Diego, CA).
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bioRxiv - Genomics 2024Quote: ... The samples had been sequenced using either the Illumina HiSeq 2500 platform using the HiSeq Rapid SBS Kit v2 500-cycles (Illumina) or the MiSeq platform (Illumina ...
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bioRxiv - Genomics 2024Quote: ... 4.5 µl of sample were used to generate single cell RNA-Seq libraries by following the Illumina Bio-Rad SureCell WTA 3’ Library Prep Guide (Illumina, San Diego CA and Bio-Rad ...
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bioRxiv - Genomics 2024Quote: ... or the MiSeq platform (Illumina) using the MiSeq Reagent Kit v2 500-cycles (Illumina) ...