Labshake search
Citations for Illumina :
401 - 450 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cell Biology 2024Quote: ... The library pool was denatured with NaOH and was finally diluted to 1.8 pM according to the Denature and Dilute Libraries Guide (Document #15048776 v02, Illumina, US). 1.3 ml of the denatured pool was loaded on an Illumina NextSeq 550 sequencer using a High Output Flowcell (400M cluster ...
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bioRxiv - Cell Biology 2024Quote: ... 1.3 ml of the denatured pool was loaded on an Illumina NextSeq 550 sequencer using a High Output Flowcell (400M cluster) for single reads (#20024906, Illumina, US). Sequencing was performed with the following settings-Sequence reads 1 and 2 with 38 bases each ...
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bioRxiv - Cell Biology 2024Quote: BCL files were converted to FASTQ files using bcl2fastq Conversion Software version v2.20.0.422 (Illumina, US).
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bioRxiv - Microbiology 2024Quote: ... The libraries were sequenced using the HiSeq 2000 system (Illumina). Two biological replications have been performed for all ChIP-seq experiments ...
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bioRxiv - Cell Biology 2024Quote: ... from islets was added to 50 μM first-strand RT primer (the sequence at the 5’ portion corresponds to primer P7 on the Illumina flowcell), 10 mM dNTP mix ...
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bioRxiv - Cell Biology 2024Quote: ... and then sequenced on HiSeq3000 (Illumina). Reads were then aligned to the Ensemble top-level assembly with STAR version 2.0.4b ...
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bioRxiv - Cell Biology 2024Quote: ... Preparation of libraries was done with Ribo-Zero rRNA depletion kit (Illumina) and then sequenced on HiSeq3000 (Illumina) ...
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bioRxiv - Microbiology 2024Quote: ... The 16S rRNA amplicons and ITS amplicons were pooled separately and sequenced using the Illumina MiSeq instrument (Illumina, San Diego, CA, USA). The raw sequences were quality filtered using the Quantitative Insights into Microbial Ecology pipeline (QIIME v1.9) ...
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bioRxiv - Microbiology 2024Quote: Genomic DNA libraries were prepared using the Nextera XT Library Prep Kit (Illumina, San Diego, USA) following the manufacturer’s protocol with the following modifications ...
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bioRxiv - Microbiology 2024Quote: ... Libraries were sequenced on an lllumina NovaSeq 2500 (Illumina, San Diego, USA) using a 250 bp paired end protocol.
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Tryptophan Metabolites And Their Predicted Microbial Sources In Fecal Samples Of Healthy IndividualsbioRxiv - Microbiology 2024Quote: ... A set of 96 Unique dual index barcodes (Illumina TruSeq UD Indexes, # 20022370) were utilized to barcode samples ...
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bioRxiv - Microbiology 2024Quote: ... The raw sequencing reads were demultiplexed based on sample indexes using basespace (Illumina) and the fastQ files were used for further processing ...
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bioRxiv - Microbiology 2024Quote: ... Deep sequencing was subsequently performed using an S4 flow cell in a NovaSeq sequencing system (Illumina; average read depth ∼30 million pairs of 2×100bp reads ...
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bioRxiv - Microbiology 2024Quote: ... samples were pooled and preliminary sequencing of cDNA libraries (average read depth of 90,000 reads) was performed using a MiSeq system (Illumina), to confirm library quality and concentration ...
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bioRxiv - Microbiology 2024Quote: ... The libraries were then subjected to paired end sequencing on Illumina Nextseq using Nextseq Mid Output kit (Illumina) with a read length of 150 bp ...
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bioRxiv - Molecular Biology 2024Quote: ... Libraries were sequenced 2x36 with an NextSeq 500/550 High Output v2.5 75 cycles kit (Illumina, 20024906) on a NextSeq 550 ...
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bioRxiv - Molecular Biology 2024Quote: DNA methylation was analyzed using Infinium Mouse Methylation BeadChip (MMBC) Array from Illumina. DNA for MMBC (500 ng in 40 μL nuclease-free water ...
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bioRxiv - Cell Biology 2024Quote: ... 3 μg of total RNA samples underwent treatment with the epicenter Ribo-ZeroTM Kit (Illumina, San Diego, USA) to remove rRNA ...
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bioRxiv - Molecular Biology 2024Quote: ... and sequenced on a NextSeq500 instrument (Illumina) at the Core Facilities of the Medical University of Vienna ...
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bioRxiv - Molecular Biology 2024Quote: ... which was further sequenced with a Novaseq 6000 platform (Illumina) by following the manufacturer’s instructions.
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bioRxiv - Molecular Biology 2024Quote: ... Pair-end sequencing (2x300) was done with MiSeq Reagent Kit v3 in a MiSeq platform (Illumina) by following the manufacturer’s instructions.
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bioRxiv - Molecular Biology 2024Quote: ... Pooled libraries were sequenced on a NextSeq500 instrument (Illumina) in 1×75bp single-end sequencing mode ...
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bioRxiv - Molecular Biology 2024Quote: ... and sequenced as 125- or 250-base-pair paired end reads using Illumina Hiseq 2500 (Illumina). WGBS data were deposited under the GEO accession number GSE252760.
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bioRxiv - Molecular Biology 2024Quote: ... RNA-sequencing libraries were prepared using Truseq stranded mRNA kit (Illumina) according to the manufacture’s protocol ...
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bioRxiv - Developmental Biology 2024Quote: ... prior to deep sequencing on a NovaSeq S4 (Illumina). For control IVS+AVC ...
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bioRxiv - Molecular Biology 2024Quote: ... Libraries were pooled with 15% PhiX Sequencing Control v3 (Illumina, FC-110-3001) and 15% genomic EM-seq libraries for complexity and sequenced with 374 cycles on R1 ...
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bioRxiv - Microbiology 2024Quote: ... DNA libraries were created using the Nextera XT DNA preparation kit (Illumina) and whole genome sequencing was performed on the NextSeq platform (Illumina ...
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bioRxiv - Microbiology 2024Quote: ... Micro-RNAs were detected using Illumina Hiseq x Ten (Illumina, Inc, San Diego, CA) with data processing by ribodepletion (Genewiz-Azenta ...
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bioRxiv - Microbiology 2024Quote: ... Libraries were sequenced by Illumina NextSeq 550 platform with single-end reads of 75 cycles according to the manufacturer’s instructions.
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bioRxiv - Microbiology 2024Quote: The library of the extracted genomic DNA was prepared by Illumina Nextera XT DNA Library Prep Kit protocol (# FC-131-1096 ...
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bioRxiv - Molecular Biology 2024Quote: ... The final library was sequenced on the NextSeq 500 instrument (Illumina). Multiplexed reads were demultiplexed with bcl2fastq (Illumina) ...
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bioRxiv - Molecular Biology 2024Quote: ... coli (Illumina) was added (10U/sample ...
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bioRxiv - Molecular Biology 2024Quote: ... Multiplexed reads were demultiplexed with bcl2fastq (Illumina). The quality of RNA-Seq reads was validated using FastQC v0.11.3 51).
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bioRxiv - Neuroscience 2024Quote: ... 10x libraries were sequenced twice: shallow on NextSeq500 (Illumina) to determine library quality and more in depth using NovaSeq6000 (Illumina) ...
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bioRxiv - Neuroscience 2024Quote: ... 70M 150bp paired-end reads were sequenced per sample on an Illumina NovaSeq 6000 using the S4 Reagent Kit v1.5 (Illumina, Cat#20028313) by the Genome Technologies Core at the Jackson Laboratory.
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bioRxiv - Neuroscience 2024Quote: ... Sequencing was performed by NovaSeq (Illumina) at 2x150 reads base pairs (bps ...
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bioRxiv - Molecular Biology 2024Quote: ... and 0.08 μl (0.12 μl for single cell) Tn5 (Nextera Amplicon Tagment Mix, Illumina) and 100pg of cDNA in 2μl total ...
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bioRxiv - Neuroscience 2024Quote: ... Illumina sequencing libraries were generated from the amplified cDNA samples using the Illumina Tagment DNA Enzyme and Buffer kit (Illumina, CA). These libraries were examined by Qubit and Bioanalyzer ...
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bioRxiv - Neuroscience 2024Quote: ... Purified total RNA was used to generate mRNA libraries using NEBNext Poly(A) mRNA Magnetic Isolation Module and NEBNext Ultra RNA Library Prep kit for Illumina (Illumina Inc., San Diego, CA, USA). Quality and quantity were assessed using an Agilent DNA1000 series chip assay and Invitrogen Qubit HS Kit (Invitrogen) ...
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bioRxiv - Developmental Biology 2024Quote: ... All cDNA libraries were generated from 1 µg total RNA using the TrueSeq Stranded Total RNA Library Preparation Kit with the Ribo-Zero Gold Kit according to the manufacturer’ ss instructions (Illumina Inc., San Diego, CA, USA). Quality and quantity of the cDNA libraries were assessed using a TapeStation 4200 (D1000 screen tape assay ...
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bioRxiv - Genetics 2024Quote: ... HuRef (Illumina HiSeq X Five) and of Korean ancestry ...
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bioRxiv - Genetics 2024Quote: ... we aligned the corresponding short reads to the human reference GRCh38 using bwa mem23 (v 0.7.17-r1188; -t 48 -R “@RG\tID:1\tLB:lib1\tPL:ILLUMINA\tSM:
\tPU:unit1”). Next ... -
bioRxiv - Genomics 2024Quote: ... we used primers flanking both sgRNA scaffolds and sequenced on a 300-cycle sequencing kit (e.g. Illumina MS-102-2002). For subsequent library sequencing without quantification of deletion events ...
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bioRxiv - Molecular Biology 2024Quote: ... the libraries were sequenced on the Illumina Hiseq 4000 platform (Illumina, Inc., San Diego, CA) using 150 bp paired-end reads ...
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bioRxiv - Molecular Biology 2024Quote: ... and imputation was performed using the GSE40279 dataset (Illumina 450k) used in his original manuscript ...
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bioRxiv - Genomics 2024Quote: ... samples were incubated in cleavage mix (MiSeq Nano kit v2 reagent 4) (Illumina MS-103-1003) for 6 min at 60 °C ...
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bioRxiv - Genomics 2024Quote: ... samples were incubated in incorporation mix (MiSeq Nano kit v2 reagent 1) (Illumina MS-103-1003) for 5 minutes at 60 °C on a flat-top thermal cycler ...
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bioRxiv - Genomics 2024Quote: ... then washed six times with PR2 buffer (Illumina MS-103-1003), followed by 5 heated washes in PR2 ...
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bioRxiv - Genomics 2024Quote: ... Sequencing was performed on an Illumina NovaSeq 6000 PE150 platform (Illumina Inc. San Diego, CA, USA), and 150 bp paired-end raw files were obtained ...
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bioRxiv - Genomics 2024Quote: ... using a MiSeq Reagent kit v2 (Illumina, San Diego, CA).