Labshake search
Citations for Illumina :
1 - 50 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Developmental Biology 2024Quote: ... short-read (Illumina) and long-read (ONT ...
-
bioRxiv - Developmental Biology 2024Quote: ... and tagmentation reaction (Tn5 Illumina) was performed on 50,000 isolated nuclei ...
-
bioRxiv - Evolutionary Biology 2024Quote: ... The libraries were then shipped to Admera Health and were paired-end sequenced (2 × 150 bp) on a lane of the NovaSeq X instrument (Illumina, Inc., San Diego, CA).
-
bioRxiv - Evolutionary Biology 2024Quote: ... which were used to construct a genomic library using the TruSeq DNA PCR-free library kit (Illumina, San Diego, CA). Library quality was assessed with an Agilent 4200 Tapestation and Lightcycler quantitative PCR (Roche Life Science ...
-
bioRxiv - Evolutionary Biology 2024Quote: ... The Omni-C library was sequenced to approximately 30× coverage on an Illumina NovaSeq 6000 instrument (Illumina, Inc., San Diego, CA).
-
bioRxiv - Evolutionary Biology 2024Quote: ... Samples were 2 × 150 bp paired-end sequenced on one lane each of a HiSeq X Ten instrument (Illumina, Inc., San Diego, CA). Samples for Luke and Nababiep were prepared by HudsonAlpha Institute for Biotechnology (Huntsville ...
-
bioRxiv - Evolutionary Biology 2024Quote: ... MD] using a Qiagen BioSprint® 96 robot according to manufacturer’s instructions) were built into dual-indexed Illumina libraries using a modified Illumina Nextera (Illumina, Inc., San Diego, CA) DNA library preparation protocol as described in (Baym et al ...
-
bioRxiv - Evolutionary Biology 2024Quote: ... Their genomes were paired-end sequenced (2 × 150 bp) on an Illumina NovaSeq X platform (Illumina, Inc., San Diego, CA) as part of a project that developed a SNP panel for forensic and molecular ecology analyses of this species (Lazzari et al. ...
-
bioRxiv - Evolutionary Biology 2024Quote: ... and 2 × 150 base pair (bp) paired-end sequenced at Admera Health (South Plainfield, NJ) on a NovaSeq 6000 S4 lane (Illumina, Inc., San Diego, CA).
-
bioRxiv - Developmental Biology 2024Quote: ... 250,000 cells per sample were submitted to the VBC NGS facility for further processing and ATAC-seq library preparation (Bulk ATAC-seq Illumina). In brief ...
-
bioRxiv - Developmental Biology 2024Quote: ... Samples were sequenced with 36 bp pair-end reads on the NextSeq 550 (Illumina) using the Illumina NextSeq 500/550 High Output Kit v2.5 (75 cycles ...
-
bioRxiv - Developmental Biology 2024Quote: ... Prepared libraries were multiplexed in pools of equimolar concentrations and sequenced on the NextSeq 500 (Illumina) with 75-bp paired-end (for the wild-type ...
-
bioRxiv - Developmental Biology 2024Quote: ... The HiChIP libraries were sequenced on a NovaSeq 6000 Sequencing System (Illumina) aiming ∼400 million 150PE reads per library.
-
bioRxiv - Developmental Biology 2024Quote: ... Prepared libraries were multiplexed in pools of equimolar concentrations and sequenced on the NextSeq 500 (Illumina) platform with 75-bp paired-end readings ...
-
bioRxiv - Cell Biology 2024Quote: ... The paired-end WGS (2 x 150 bp) was performed on a NovaSeq 6000 system (Illumina). The bioinformatics analysis of the WGS-based mutation identification was performed according to the MiModD pipeline v0.1.965 by Center for Computational and Systems Biology and Technology Commons at College of Life Science ...
-
bioRxiv - Cell Biology 2024Quote: ... The paired-end RNA sequencing (2 x 150 bp) was performed on a HiSeq 4000 system (Illumina). The sequencing data were converted from base call files to FASTQ files using Illumina’s bcl2fastq v2.2.0 ...
-
bioRxiv - Cell Biology 2024Quote: ... DNA libraries for RRBS analysis were prepared using the Premium RRBS kit V2 and sequenced using HiSeq XTM Ten (Illumina) (150-bp paired-ends reads) ...
-
bioRxiv - Cell Biology 2024Quote: ... and sequenced using HiSeq XTM Ten (Illumina) (150-bp paired-ends reads).
-
bioRxiv - Cell Biology 2024Quote: ... and sequenced using HiSeq XTM Ten (Illumina). Reads were aligned by Hisat2 to the Mus musculus genome (mm10) ...
-
bioRxiv - Cell Biology 2024Quote: ... Paired-end sequencing of 100 bp was performed on a NovaSeq 6000 system (Illumina, Inc.). Quality control metrics of raw sequencing reads were performed with FastQC v0.11.7 ...
-
bioRxiv - Cell Biology 2024Quote: mRNA paired-end libraries were constructed using the TruSeq Stranded mRNA Sample Prep Kit (Illumina, Inc., San Diego, CA). Paired-end sequencing of 100 bp was performed on a NovaSeq 6000 system (Illumina ...
-
bioRxiv - Cell Biology 2024Quote: ... Sequencing was performed with Illumina NextSeq 2000 according to the manufacturer’s instructions (Illumina).
-
bioRxiv - Developmental Biology 2024Quote: ... TDE buffer 25 mL (Illumina)) ...
-
bioRxiv - Developmental Biology 2024Quote: ... These cells were processed through the Chromium Next GEM Single Cell 3’ Reagent Kits v3.1 (10X Genomics) according to manufacturer’s recommendations and sequenced on Novaseq6000 (Illumina). The data were processed through the CellBender software to decrease contamination by ambient RNA (Fleming et al. ...
-
bioRxiv - Developmental Biology 2024Quote: ... The lllumina NovaSeq 6000 sequencer (Cat #20068232, Illumina Inc., San Diego, CA) was used to sequence the libraries with the production of paired-end 150 base 20-25 million reads per sample on an S4 flow cell.
-
bioRxiv - Developmental Biology 2024Quote: ... and nuclei were resuspended in 50 mL of reaction buffer (TDE1 transposase 2.5 mL (Illumina), TDE buffer 25 mL (Illumina)) ...
-
bioRxiv - Developmental Biology 2024Quote: ... >7 passed quality control and were used for library preparation with the Illumina Stranded mRNA Library Prep Kit according to manufacturer’s instructions (Cat #20040532, Illumina Inc., San Diego, CA). This procedure includes mRNA purification and fragmentation ...
-
bioRxiv - Developmental Biology 2024Quote: ... The multiplexed libraries were loaded on a NovaSeq 6000 (Illumina) and sequences were produced using a 200 Cycles Kit ...
-
bioRxiv - Developmental Biology 2024Quote: ... The multiplexed libraries were loaded onto a NovaSeq 6000 (Illumina) using a S2 flow cell and paired-end sequences were generated using a 200 Cycle Kit ...
-
bioRxiv - Developmental Biology 2024Quote: ... Sequencing was performed with the NextSeq 500 (Illumina).
-
bioRxiv - Developmental Biology 2024Quote: ... Sequencing was performed with the NextSeq 500 (Illumina).
-
bioRxiv - Cell Biology 2024Quote: ... ChIP’d DNA and IgG controls for peak calling were prepared and sequenced using the NovaSeq 6000 platform (Illumina) as 150bp paired-end reads by Novogene Bioinformatics Technology Co. ...
-
bioRxiv - Cell Biology 2024Quote: ... The second-strand cDNA was synthesized by adding 100 μM primer (the specific sequence at the 5′ portion corresponds to the primer for sequencing on the Illumina flowcell), 10× Taq DNA Polymerase Buffer ...
-
bioRxiv - Cell Biology 2024Quote: ... Libraries were sequenced in a HiSeq2500 (Illumina Inc.) by at least 12 million 51-nucleotide reads ...
-
bioRxiv - Cell Biology 2024Quote: Paired end demultiplexed fastq files were generated using bcl2fastq2 (Illumina, v2.17), from NextSeq550 v2.5 reagent’s bcl files ...
-
bioRxiv - Immunology 2024Quote: ... Libraries were pooled and sequenced on the Illumina NovaSeq 6000 (Illumina, San Diego, CA) on an SP1 flow cell in the FHCC Genomics Core.
-
bioRxiv - Immunology 2024Quote: ... TRB sequencing was performed on pools of libraries from 11 - 15 tumor or skin samples on the Illumina MiSeq platform using a v3 150-cycle kit (Illumina, San Diego, CA) in the FHCC Genomics Core Facility (Seattle ...
-
bioRxiv - Immunology 2024Quote: ... were prepared in the Fred Hutchinson Cancer Center (FHCC) Genomics Core Facility (Seattle, WA) using the TruSeq RNA Sample Prep Kit v2 (Illumina, San Diego, CA, USA), as previously described (Rose et al. ...
-
bioRxiv - Immunology 2024Quote: ... Sequencing of the PCR amplicons spanning the MHC loci was performed on the Illumina MiSeq platform using a v2 500-cycle kit (Illumina, San Diego, CA) in the FHCC Genomics Core Facility or the UCI-Fred Hutch Cancer Centre Laboratory.
-
bioRxiv - Immunology 2024Quote: ... libraries were sequenced according to manufacturer’s instruction on Novaseq6000 platform (Illumina). Target coverage was 50,000 cluster/cell.
-
bioRxiv - Immunology 2024Quote: ... Sequencing libraries were prepared using the Rapid Directional RNA-Seq Kit (NEXTflex) and sequenced on a NextSeq500 (Illumina) generating 75 base long reads (Utrecht DNA Sequencing Facility) ...
-
bioRxiv - Genomics 2024Quote: ... Sequencing was performed on an Illumina® NovaSeq 6000 (Illumina, California, USA) with a read length configuration of 75 SE per sample.
-
bioRxiv - Genomics 2024Quote: ... A 2.5-kb ‘jumping’ library was prepared using the 2-to-5-kb insert Illumina Mate-pair library prep kit (V2; Illumina). These libraries were sequenced on an Illumina HiSeq 2000 ...
-
bioRxiv - Genomics 2024Quote: ... we first extracted the SVs at chromosome level merged and normalized multi-sample VCF files with MAF >= 0.05 using bcftools (v1.15.1) and then used principal component analysis module of AKT (v0.3.3) (https://github.com/Illumina/akt) on the extracted variants using the following command.
-
bioRxiv - Genomics 2024Quote: ... (with parameters -K 100000000 -Y -t 8 -R @RG\tID:0\tSM:HG002\tLB:HG002\tPU:HG002_38_nodecoy\tCN:BCM\tDT:2021-03-10T00:00:00-0600\tPL:Illumina) to both GRCh37 and GRCh38 reference genome ...
-
bioRxiv - Genomics 2024Quote: ... Libraries were then quantified and sequenced using NovaSeq platform (Illumina).
-
bioRxiv - Evolutionary Biology 2024Quote: Illumina sequencing libraries for three amplified DNA samples were prepared using Nextera TruSeq DNA PCR-Free Low Throughput Library Prep Kit (Illumina). Subsequently ...
-
bioRxiv - Evolutionary Biology 2024Quote: ... Enriched library pools were then multiplexed and sequenced on an Illumina MiSeq (Illumina, San Diego, California, USA) with v3 reagent chemistry (2 × 300 bp paired-end reads ...
-
bioRxiv - Evolutionary Biology 2024Quote: ... The library was sequenced together with 92 other libraries on the Illumina HiSeq2500 platform (Illumina, San Diego, USA) with 2 x 126 bp paired-end reads ...
-
bioRxiv - Evolutionary Biology 2024Quote: ... Illumina TruSeq Stranded mRNA library preparation Kit (Illumina) and NextSeq 500 Mid Output Kit PE75 (120 M reads ...