Labshake search
Citations for Illumina :
1 - 50 of 10000+ citations since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cancer Biology 2024Quote: ... 2.5 μL Tn5 transposase (Illumina), 16.5 μL 1X PBS ...
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bioRxiv - Neuroscience 2024Quote: ... ATACseq: The ATACseq library was prepared using the Nextera DNA Library Prep Kit (Illumina) with the Active Motif proprietary method and sequenced on Illumina NextSeq 500 as 42bp paired-end reads (PE42) ...
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bioRxiv - Neuroscience 2024Quote: ... RNA was analyzed using a BioAnalyzer and samples with 8.7-10.0 RNA integrity number values were used for library preparation using the Illumina TruSeq RNA Sample Preparation v2 Guide (Illumina). Libraries were sequenced on an Illumina NextSeq 500 as 42bp paired-end reads (PE42) ...
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bioRxiv - Neuroscience 2024Quote: Approximately 500 ng of total RNA was used for cDNA library preparation with oligo-dT primers following the Illumina TruSeq preparation guide (Illumina, San Diego, CA) (Mecklenburg et al. ...
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bioRxiv - Neuroscience 2024Quote: ... All the libraries were sequenced using a Novaseq 6000 (Illumina).
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bioRxiv - Neuroscience 2024Quote: ... and sequenced using a NovaSeq S4 Reagent Kit (catalog no. 20027466, Illumina) for 200 cycles at a depth of approximately 250-400 million read-pairs per sample ...
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bioRxiv - Neuroscience 2024Quote: ... Libraries were loaded at 300 pM into a NovaSeq 6000 System (Illumina) and sequenced using a NovaSeq S4 Reagent Kit (catalog no ...
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bioRxiv - Neuroscience 2024Quote: ... All libraries were sequenced by Novaseq6000 (Illumina, San Diego, CA, USA) on a 150 bp paired-end run.
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bioRxiv - Plant Biology 2024Quote: ... All genotypes were resequenced (Illumina HiSeq X10 and Illumina NovaSeq 6000 paired-end sequencing ...
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bioRxiv - Neuroscience 2024Quote: ... Single-cell RNA-sequencing libraries of the cDNA were prepared using the Nextera XT DNA library prep kit (Illumina). Libraries were multiplexed and sequenced in accordance with the manufacturer’s recommendations ...
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bioRxiv - Plant Biology 2024Quote: ... All library amplicons were constructed using a small RNA cloning strategy (Guo et al., 2010) and sequenced (single-end, 75 nt) using the NextSeq 500 platform (Illumina).
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bioRxiv - Plant Biology 2024Quote: ... The Ribo-Zero Gold rRNA removal kit (Illumina) was used for rRNA depletion ...
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bioRxiv - Plant Biology 2024Quote: ... Libraries were generated for three separate plants for each virus Libraries were sequenced (single-end, 75 nt) using an NextSeq 500 platform (Illumina).
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bioRxiv - Plant Biology 2024Quote: ... Base calling was done by Illumina Real Time Analysis (RTA ...
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bioRxiv - Neuroscience 2024Quote: ... Libraries were sequenced using the NextSeq500 and a NovaSeq6000 (Illumina) with these read lengths ...
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bioRxiv - Plant Biology 2024Quote: ... After three rounds of PCR with specific primers (1stPCR: CARMA_3RACE and RTPXT, 2ndPCR: mXTf and mXTr, 3rd PCR: Illumina indexing primers) and cleaning each PCR reaction on AMPure beads ...
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bioRxiv - Plant Biology 2024Quote: ... The libraries were prepared using poly-A enrichment by Novogene (UK) and the sequencing was performed on the NovaSeq 600 platform (Illumina) in 150bp paired-end mode ...
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bioRxiv - Plant Biology 2024Quote: ... The libraries were sequenced by Novogene (UK) using a HiSeq instrument (Illumina) in 150bp paired-end mode ...
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bioRxiv - Plant Biology 2024Quote: ... DNA pools were sequenced with paired-end reads on Illumina HiSeq2000 platform (Illumina, Inc., San Diego, CA, USA) and the obtained sequences have been deposited at the Sequence Read Archive database at the National Center for Biotechnology Information under BioProject accession number PRJNA860761 ...
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bioRxiv - Plant Biology 2024Quote: ... More than 10 µg of RNA per sample was sent to Novogene (Cambridge, UK) for library preparation and massive sequencing on an Illumina Novaseq 6000 (Illumina, San Diego, CA, USA).
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bioRxiv - Immunology 2024Quote: ... Raw sequence data (.bcl files) generated from Illumina NovaSeq was converted into fastq files and de-multiplexed using Illumina bcl2fastq program version 2.20 ...
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bioRxiv - Neuroscience 2024Quote: ... followed by sequencing on a HiSeq4000 system (Illumina; San Diego, CA, USA) at the McGill and Genome Quebec Innovation Center (https://cesgq.com/en-services) ...
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bioRxiv - Plant Biology 2024Quote: ... and sequenced using Illumina’s state-of-the-art NovaSeq 6000 V1.5 platform (Illumina, Gurgaon, India). This produced 150 base pair long paired-end reads ...
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bioRxiv - Pathology 2024Quote: ... paired-end libraries were sequenced by Illumina Novaseq 6000 platform (150bp*2 ...
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bioRxiv - Neuroscience 2024Quote: ... The libraries were then sequenced with Illumina NovaSeq 6000 (Illumina; San Diego, CA). The snRNA-seq raw sequencing files were processed with CellRanger 6.0 (10x Genomics ...
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bioRxiv - Neuroscience 2024Quote: ... then run on a NovaSeq 6000 S1 flow cell (Illumina) to a target sequencing depth of 60 million reads per sample using NovaSeq Control Software v1.5 ...
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bioRxiv - Neuroscience 2024Quote: ... Libraries were pooled for sequencing with a NovaSeq 6000 (Illumina) at an estimated depth of 110,000 reads per cell ...
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bioRxiv - Pathology 2024Quote: ... The libraries were sequenced using a NovaSeq 6000 (Illumina) for both mRNA and ATAC sequencing.
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Activation of XBP1s attenuates disease severity in models of proteotoxic Charcot-Marie-Tooth type 1BbioRxiv - Neuroscience 2024Quote: ... S63del and S63del/Xbp1SC-KO mice using the Zymo RNA Clean & Concentrator-5 (#R1013) and sent to Genewiz (South Plainfield, NJ) for library preparation after PolyA selection and Illumina sequencing (Illumina HiSeq 2x150bp). Illumina sequencing data were mapped to the GRCm38/mm10 genome using the STAR aligner.35 Data were analyzed using DESeq2 to determine differentially regulated genes (p-value < 0,5).36 RNA-seq data are deposited in NCBI GEO under accession number GSE252089.
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bioRxiv - Synthetic Biology 2024Quote: Each library was then sequenced on a Miseq (Illumina, San Diego, CA) using a MiSeq Reagent Kit v2 (500 cycles ...
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bioRxiv - Pharmacology and Toxicology 2024Quote: ... we used the standard Illumina TruSeq protocol (TruSeq Stranded mRNA LP, Cat # 20020594 and TruSeq RNA Sg Idx SetB, Cat # 20020493, Illumina, San Diego, CA)) following the manufacturers recommendations and as was done previously 31 ...
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bioRxiv - Molecular Biology 2024Quote: ... Sequencing libraries were constructed with the TruSeq ChIP Library Preparation Kit (Illumina) and sequenced on a NextSeq 2000 instrument (Srp2-HTP & Dbp2-HTP ...
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bioRxiv - Pharmacology and Toxicology 2024Quote: Sequencing was performed with Illumina (NovaSeq 6000 System) according to the manufacturer’s instructions (Illumina, San Diego, CA), the process has been well described before [27] ...
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bioRxiv - Neuroscience 2024Quote: ... Sequencing of the 10x Genomics single-cell RNA-seq libraries was performed on an Illumina NovaSeq 6000 (Illumina, San Diego, CA) at the sequencing core facility of the Max Planck Institute for Molecular Genetics (Berlin ...
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bioRxiv - Neuroscience 2024Quote: ... Sequencing of the 10x Genomics single-cell ATAC-seq libraries was performed on an Illumina NovaSeq 6000 (Illumina, San Diego, CA) at by the sequencing core facility at the Max Planck Institute for Molecular Genetics (Berlin ...
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bioRxiv - Cancer Biology 2024Quote: cDNA libraries were prepared with TruSeq stranded mRNA library prep Kit (Illumina, RS-122-2101) using 1 μg of total RNA ...
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bioRxiv - Cancer Biology 2024Quote: ... to FASTQ files using bcl2fastq v2.20.0.422 (Illumina).
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bioRxiv - Cancer Biology 2024Quote: ... Samples were sequenced on either a NovaSeq 6000 (Illumina) or NextSeq 550 (Illumina ...
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bioRxiv - Cancer Biology 2024Quote: ... or NextSeq 550 (Illumina) at a final depth of roughly 100 K-200 K reads/cell.
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bioRxiv - Plant Biology 2024Quote: ... Illumina single end sequencing was subsequently performed (1×100) on a NextSeq 2000 System (Illumina).
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bioRxiv - Neuroscience 2024Quote: ... using 2 NextSeq 500 High Output Kit 75-cycles (Illumina, Cat# FC-404-1005). Two Nextseq runs were performed to compile enough reads (19-32 million pass-filter reads).
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bioRxiv - Neuroscience 2024Quote: ... using the NextSeq 500 High Output Kit 75-cycles (Illumina, Cat# FC-404-1005). Flow lanes were loaded at 1.4pM of pool and including 1% PhiX ...
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bioRxiv - Neuroscience 2024Quote: Libraries of BMP2-stimulated naïve cortical cultures were prepared from 200 ng total RNA by using the TruSeq Stranded mRNA Library Kit (Cat# 20020595, Illumina, San Diego, CA, USA) and the TruSeq RNA UD Indexes (Cat# 20022371 ...
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bioRxiv - Neuroscience 2024Quote: ... Libraries were sequenced Paired-End 51 bases (in addition: 8 bases for index 1 and 8 bases for index 2) setup using the NovaSeq 6000 instrument (Illumina). SP Flow-Cell was loaded at a final concentration in Flow-Lane loaded of 400pM and including 1% PhiX ...
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bioRxiv - Neuroscience 2024Quote: ... and the TruSeq RNA UD Indexes (Cat# 20022371, Illumina, San Diego, CA, USA). 15 cycles of PCR were performed.
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bioRxiv - Neuroscience 2024Quote: ... using using 2 NextSeq 500 High Output Kit 75-cycles (Illumina, Cat# FC-404-1005) loaded at 2.5pM and including 1% PhiX ...
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bioRxiv - Neuroscience 2024Quote: ... Libraries were sequenced Single-reads 76 bases (in addition: 8 bases for index 1 and 8 bases for index 2) on NextSeq 500 (Illumina) using the NextSeq 500 High Output Kit 75-cycles (Illumina ...
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bioRxiv - Neuroscience 2024Quote: ... Libraries were sequenced Paired-End 41 bases on NextSeq 500 (Illumina) using 2 NextSeq 500 High Output Kit 75-cycles (Illumina ...
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bioRxiv - Microbiology 2024Quote: ... cDNA libraries were prepared using the TrueSeq Stranded Total RNA Sample Preparation kit with Ribo-Zero Plus (Illumina) according to the manufacturer’s protocol and sequenced thereafter via paired-end with the NovaSeq 6000 platform (Illumina) ...
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bioRxiv - Neuroscience 2024Quote: ... Libraries were prepared using the TruSeq Stranded mRNA LP kit (Illumina, San Diego, CA) and indexed using the Illumina IDT-TruSeq RNA UD Idx kit ...