Labshake search
Citations for Illumina :
101 - 150 of 10000+ citations since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Systems Biology 2024Quote: ... libraries were sequenced on a paired-end Illumina NovaSeq platform (Illumina, USA).
-
bioRxiv - Systems Biology 2024Quote: ... After quality check libraries were sequenced on a NovaSeq 6000 (Illumina, USA) at 150 bp paired-end to an average of 78.74 (range 63.82 – 94.20 ...
-
bioRxiv - Systems Biology 2024Quote: ... and sequenced on a MiSeq (Illumina, USA) running 300 bp PE ...
-
bioRxiv - Systems Biology 2024Quote: ... pooled and analyzed by paired-end sequencing using NextSeq (Illumina) for each of the three DMG cell lines ...
-
bioRxiv - Systems Biology 2024Quote: ... The product was loaded on the NextSeq 500 high output v2 kit (Illumina FC-404-2005) together with two custom primers and two PhIX primers at final concentration of 300 nM each ...
-
bioRxiv - Systems Biology 2024Quote: ... and library synthesis was performed using the Illumina TruSeq RNA prep kit (Illumina RS-122-2001). Libraries were pooled and sequenced on the Illumina HiSeq 2500 or 4000 platforms ...
-
bioRxiv - Immunology 2024Quote: ... Each sample was sequenced to a minimum depth of 30 million reads using the NovaSeq6000 system (Illumina), according to the manufacturer’s guidelines ...
-
bioRxiv - Systems Biology 2024Quote: ... and mixed with hydrolyzed PhIX control library (Illumina FC-110-3001). The final product contained 1.8 pM library with 30% PhIX/70% sample in 1.3 ml HT1 buffer ...
-
bioRxiv - Systems Biology 2024Quote: ... and hybridized on mouseWG-6 v2 BeadArrays (Illumina). Slides were scanned using an iScan (Illumina SY-101- 1001 ...
-
bioRxiv - Systems Biology 2024Quote: ... Sequencing libraries were prepared with the TruSeq stranded mRNA library prep kit per manufacturer’s recommendations (Illumina, RS-122-2101). Libraries were then pooled and sequenced with a NextSeq 500/550 Mid Output v2 kit (150 cycles ...
-
bioRxiv - Systems Biology 2024Quote: ... Slides were scanned using an iScan (Illumina SY-101- 1001) to generate the resulting files.
-
bioRxiv - Systems Biology 2024Quote: ... Libraries were then pooled and sequenced with a NextSeq 500/550 Mid Output v2 kit (150 cycles) according to the manufacturer’s recommendation (Illumina, FC-404-2001). Pooled samples were run in triplicate for a minimum sequencing depth of 20 million reads per sample ...
-
bioRxiv - Synthetic Biology 2024Quote: ... The rest of the library preparation was completed following the Denature and Dilute Libraries Guide for MiniSeq System by Illumina, then loaded and sequenced on Illumina MiniSeq with a 300-cycle kit (2 x 150 bp paired-end run).
-
Pangenomic Landscapes Shape Performances of a Synthetic Genetic Circuit Across Stutzerimonas SpeciesbioRxiv - Synthetic Biology 2024Quote: ... cDNA library preparation and sequencing (Illumina NovaSeq 6000 S4 PE150 XP). Across all samples ...
-
bioRxiv - Systems Biology 2024Quote: The sub-libraries were subjected to tagmentation using the Nextera DNA Library Preparation Kit from Illumina. The input material for the tagmentation was measured to 1ng/5μL and the tagmentation reaction was carried out for 5 minutes ...
-
bioRxiv - Synthetic Biology 2024Quote: ... v3 reagent kit (Illumina, MS-102-3003). Raw FASTQ files were aligned to a FASTA-format reference file containing the expected amplicon sequences ...
-
bioRxiv - Systems Biology 2024Quote: ... Gene expression profiles were generated using an iScan BeadArray scanner (Illumina) and pre- processed by variance stabilization and robust spline normalization ...
-
bioRxiv - Microbiology 2024Quote: ... to include ssDNA viruses) using GenomiPhi V3 DNA amplification kit (Cytiva) and sequencing library preparation using the Nextera XT kit (Illumina) was performed at previously described [43] ...
-
bioRxiv - Neuroscience 2024Quote: ... Sequencing was performed using a 50 cycle (single-end) with a HiSeq 3000 system (Illumina) with a total 100 ng of RNA from both input and immunoprecipitated fractions ...
-
bioRxiv - Neuroscience 2024Quote: ... The paired-end sequencing was performed on an Illumina MiSeq (Illumina, San Diego, CA) using the 2 × 250bp V2 sequencing kit ...
-
bioRxiv - Neuroscience 2024Quote: ... Paired-end 150 sequencing was performed using the NextSeq 500 platform (Illumina) to a read-depth of ∼20-35 million reads per sample.
-
Dysregulated expanded endocannabinoid system as therapeutic targets of amyotrophic lateral sclerosisbioRxiv - Neuroscience 2024Quote: ... A library was independently prepared with 1 µg of total RNA for each sample by an Illumina TruSeq Stranded mRNA Sample Prep Kit (Illumina, Inc.). The first step in the workflow involved purifying the poly-A-containing mRNA molecules using poly-T-attached magnetic beads ...
-
bioRxiv - Developmental Biology 2024Quote: ... Pooled libraries were subjected to paired-end sequencing according to the manufacturer’s protocol (Illumina NovaSeq XPlus). BCL Convert Software (Illumina ...
-
bioRxiv - Developmental Biology 2024Quote: Basecalling and demultiplexing were performed using bcl2fastq2 v2.20.0.422 (Illumina) and sgRNA-sequences were isolated from the reads using cutadapt v3.1 via hard-clipping ...
-
bioRxiv - Developmental Biology 2024Quote: ... Single-end 100bp were sequenced on Novaseq 6000 (Illumina, Inc, California, USA) and an average of ∼20 million reads per sample were obtained.
-
bioRxiv - Developmental Biology 2024Quote: ... an equimolar pool of all samples was established and sequenced on a NovaSeq 6000 sequencing machine (Illumina Inc., California, USA) with 100 bp single read configuration.
-
bioRxiv - Genomics 2024Quote: ... the annotation file specified with –a was the UCSC mm10 reference provided by Illumina’s iGenomes ...
-
bioRxiv - Genomics 2024Quote: ... The snRNAseq libraries were sequenced by Illumina HiSeq X ...
-
bioRxiv - Immunology 2024Quote: ... 2024) using the command CreateSeuratObject with the following parameters: min.cells = 3 and either min.features = 200 (for Illumina reads from MBC gate) or min.features = 100 (for the Oxford Nanopore reads from the ASC gate) ...
-
bioRxiv - Genetics 2024Quote: ... Libraries were sequenced in 2×38-bp paired-end mode with NextSeq 500 sequencing technology (Illumina), per the manufacturer’s recommendations.
-
bioRxiv - Genetics 2024Quote: ... Libraries were pooled and sequenced in 50-bp single-end mode with HiSeq 2500 sequencing technology (Illumina), per the manufacturer’s recommendations.
-
bioRxiv - Immunology 2024Quote: ... cDNA libraries were sequenced using a NovaSeq6000 (Illumina, San Diego, CA) to a depth of 50,000 reads for RNA and 4,000 reads for T cell receptors (TCRs ...
-
bioRxiv - Genetics 2024Quote: ... The libraries were purified by 0.5X-1.5X volumes left-right side of Ampure XP DNA purification beads and sequenced in 50-bp single-end mode with HiSeq 2500 sequencing technology (Illumina), per the manufacturer’s recommendations.
-
bioRxiv - Genetics 2024Quote: ... The libraries were amplified for 5 cycles and sequenced in 2×75-bp paired-end mode with NextSeq 500 sequencing technology (Illumina), per the manufacturer’s recommendations.
-
bioRxiv - Genetics 2024Quote: ... Adapter-ligated fragment amplification was done using Nextera XT index kit (Illumina) in a total volume 50μl (1x Phusion HF Buffer ...
-
bioRxiv - Systems Biology 2024Quote: ... For analysis of the PPIseq selection data and/or REDIseq array identification data (three lanes of Illumina HiSeq) for Figure 2 ...
-
bioRxiv - Systems Biology 2024Quote: ... The mRNA library was constructed with TruSeq RNA Sample Preparation Kit (Illumina, catalog # RS-122-2001) and sequenced on an Illumina HiSeq 2500 System with paired-end 150-base-pair reads following the manufacturer’s recommendations by Novogene.
-
bioRxiv - Evolutionary Biology 2024Quote: ... we estimated Ne using whole genome resequencing data (21× depth of coverage by ILLUMINA technology) for wild Central Asian ...
-
bioRxiv - Systems Biology 2024Quote: ... (Hongkong, China) on HiSeq platform (Illumina Inc., CA). Libraries were generated from 1 μg DNA per sample using the NEBNext Ultra DNA Library Prep Kit (NEB #E7645 ...
-
bioRxiv - Systems Biology 2024Quote: ... libraries were sequenced to generate 150 bp paired-end reads (HiSeq sequencing platform, Illumina Inc., US). Metagenome assembly and binning ...
-
bioRxiv - Plant Biology 2024Quote: ... Using TruSeq stranded mRNA kit (Illumina), the fragmented mRNA was reverse transcribed to create the first strand of cDNA with random hexamers and SuperScript™ II Reverse Transcriptase (Thermo Fisher Scientific ...
-
bioRxiv - Plant Biology 2024Quote: ... Libraries were prepared using the TruSeq RNA Library Preparation kit (Illumina, USA) and sequenced on an Illumina Novaseq platform ...
-
bioRxiv - Plant Biology 2024Quote: ... barcoded libraries were sequenced at the Génome Québec Innovation Centre (Montreal, Canada) on a single lane of a NovaSeq 6000 sequencer (Illumina, San Diego, CA). GBS analysis was performed as described by Bekele et al ...
-
bioRxiv - Plant Biology 2024Quote: ... total RNA from Col-0 and hakai-1 (Mock and Hpa) three biological replicates (same samples used for Illumina RNA-seq) were pooled into a single sample ...
-
bioRxiv - Plant Biology 2024Quote: ... Library construction (TruSeq Stranded mRNA) and sequencing (Illumina NovaSeq 6000) was performed at MACROGEN ...
-
bioRxiv - Plant Biology 2024Quote: ... Concentration-normalized libraries were sequenced using Nova Seq 6000 (Illumina) at OIST sequencing facilities (150bp ...
-
bioRxiv - Neuroscience 2024Quote: We measured the genotype of SNP across the genome using the Infinium Global Screening Array-24 v3.0 Kit (Illumina) with the same extracted DNA samples used for the DNA methylation measurement ...
-
bioRxiv - Synthetic Biology 2024Quote: ... Extracted DNA was PCR amplified with a forward primer binding to the end of the leader sequence (PCR1 Fwd primer with Illumina adapter overhang) and a reverse primer annealing to the intronic region directly 3’ of the J segment (PCR1 Rev primer with Illumina adapter overhang) ...
-
bioRxiv - Synthetic Biology 2024Quote: ... and a reverse primer annealing to the intronic region directly 3’ of the J segment (PCR1 Rev primer with Illumina adapter overhang). PCRs were performed with Q5 High-fidelity DNA polymerase (NEB ...
-
bioRxiv - Plant Biology 2024Quote: ... Indexed libraries were sequenced on the platform of HiSeq2000 (Illumina). Paired-end raw fastq data were evaluated with FastQC and low-quality reads were removed with Trim Galore (Babraham Institute) ...