Labshake search
Citations for Illumina :
301 - 350 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genetics 2024Quote: The effects of SNVs on pre-mRNA splicing were predicted using the SpliceAI (Illumina, USA) (23) ...
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bioRxiv - Genetics 2024Quote: ... Sequencing was carried out in single-end mode (75 bp) by using NextSeq 500 (Illumina, San Diego, California, USA) with a targeted sequencing depth of 30 million reads per sample ...
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bioRxiv - Genomics 2024Quote: ... and sequenced on an Illumina MiSeq with a 150-cycle kit (Illumina MS-102-3001) with 75 cycles for each read and 8 cycles for each index ...
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bioRxiv - Genomics 2024Quote: ... The nuclei were resuspended in transposition reaction mix (2x TD Buffer (Illumina Cat #FC-121–1030, Nextera), 2.5 µl Tn5 Transposase (Illumina ...
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bioRxiv - Genomics 2024Quote: ... 2.5 µl Tn5 Transposase (Illumina, 20034197 Cat #FC-121–1030, Nextera) and Nuclease Free H2O ...
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bioRxiv - Genomics 2024Quote: ... and the Illumina TruSeq HT Library Preparation Kit (Illumina, Inc. San Diego, CA, USA) (Figure 2) ...
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bioRxiv - Genomics 2024Quote: ... Barcoded libraries were sequenced to a read depth of 20 million reads using the Novaseq 6000 (Illumina) to generate 100 base pair paired-end reads.
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bioRxiv - Genomics 2024Quote: ... Libraries were sequenced at Vanderbilt Technologies for Advanced Genomics at Vanderbilt University – VANTAGE to produce 150 bp pair-end reads in a HiSeq 2500 or NovaSeq 6000 Illumina sequencer (Illumina, Inc. San Diego, CA).
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bioRxiv - Genomics 2024Quote: ... and the TDE1 Tagment DNA Enzyme and Buffer Kit (Illumina, #20034197) was utilized according to the manufacturer’s instructions ...
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bioRxiv - Genomics 2024Quote: ... and TD Tagment DNA Buffer (Illumina, 15027866)) ...
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bioRxiv - Genomics 2024Quote: ... Barcoded libraries were sequenced to a read depth of 30 million 150 base pair paired-end reads using the Novaseq 6000 (Illumina).
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bioRxiv - Genomics 2024Quote: ... since the original data were produced on a different beadchip with respect to the HO and 1240K data (Infinium Omni2.5-8 Illumina beadchip). The results of the first two PCs were visualized in R-4.1.3 (https://www.r-project.org/ ...
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bioRxiv - Genomics 2024Quote: ... 2μL Tn5 enzyme (Tn5 enzyme (Illumina, 15027865) and TD Tagment DNA Buffer (Illumina ...
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bioRxiv - Genomics 2024Quote: ... RNA-sequencing libraries were prepared from 200ng RNA using the Illumina Truseq stranded mRNA library prep (Illumina, 20020594) with a poly A selection ...
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bioRxiv - Genomics 2024Quote: ... The transposed DNA was PCR amplified and indexed using the Illumina Nextera Kit (Illumina) and NEBNext High-Fidelity 2x PCR Master Mix (NEB ...
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bioRxiv - Genetics 2024Quote: ... 800 ng of total RNAs were treated with 5’-polyphosphatase (Epicenter/Illumina) for 30 min ...
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bioRxiv - Genomics 2024Quote: ... Ribosomal RNA depletion was performed using the RiboZero Gold kit (Illumina, California, USA). The rRNA-depleted RNA was purified by 2x RNAClean XP beads (Beckman Coulter ...
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bioRxiv - Genomics 2024Quote: ... Twenty individual resequencing datasets were downloaded from the European Nucleotide Archive (ENA: 150-bp paired-end, Illumina sequencing data ...
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bioRxiv - Genomics 2024Quote: ... Paired-end (PE) sequencing was carried out on an Illumina HiSeq sequencer (Illumina, California, USA) with a read length configuration of 150 bp and 20 million reads per sample (10 million reads in each direction).
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bioRxiv - Genetics 2024Quote: ... according to the manufacturer’s instructions at a final primer concentration of 250 nM in Eco Real-Time PCR System (Illumina) under the following conditions ...
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bioRxiv - Genetics 2024Quote: ... Base-calling was performed using RTA2 software (Illumina, San Diego, California, USA). File conversion and demultiplexing were performed using bcl2fastq software (version 2.20.0) ...
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bioRxiv - Genomics 2024Quote: ... The COVIDSeq Assay amplicon (Illumina®, USA) sequencing protocol was followed ...
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bioRxiv - Genomics 2024Quote: ... Sequencing libraries were prepared using KAPA RNA HyperPrep kit (Illumina Platforms, KR1350-v2.16) and the BRAVO NGS workstation (Agilent ...
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bioRxiv - Genomics 2024Quote: ... The libraries were prepared with the Nextera XT kit (Illumina, San Diego, CA, USA) and sequencing was performed with the NextSeq 500 system (Illumina ...
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bioRxiv - Genomics 2024Quote: ... Gene expression libraries were constructed and indexed according to manufacturer’s instructions and pooled for sequencing on a NovaSeq 6000 sequencer (Illumina). All libraries were sequenced to a targeted depth of 400 million reads in the following configuration ...
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bioRxiv - Genomics 2024Quote: ... and sequencing was performed with the NextSeq 500 system (Illumina) generating 150 bp paired-end reads.
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bioRxiv - Genomics 2024Quote: ... Illumina Nextera XT DNA Libraries were prepared (Illumina, FC-131-1096) and sequenced (Illumina HiSeq 4000 ...
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bioRxiv - Genomics 2024Quote: ... and sequenced (Illumina HiSeq 4000) in multiplex (768 ...
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bioRxiv - Genomics 2024Quote: ... Sequencing was performed on a NextSeq 2000 (Illumina, San Diego, California, USA) with 100 bp single end reagent kits.
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bioRxiv - Genomics 2024Quote: ... 2023) and then sequenced by an Illumina NovaSeq6000 sequenator (Illumina, USA). Total RNAs were extracted using an RNAprep Pure Plant Kit (Cat ...
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bioRxiv - Genomics 2024Quote: ... Library preparation and sequencing were performed using 250 ng RNA with the ScriptSeq kit v2 (Illumina, San Diego, CA, USA). Sequencing of the libraries was performed with HiSeq2500 (Illumina ...
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bioRxiv - Genomics 2024Quote: The DNA samples were submitted to the Centre Nacional d’Anàlisi Genòmica (CNAG-CRG, Barcelona, Spain) for whole-genome sequencing on a NovaSeq 6000 instrument (Illumina, San Diego, CA, USA) in paired-end mode ...
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bioRxiv - Genomics 2024Quote: ... and then sequenced using an Illumina NovaSeq6000 sequenator (Illumina, USA). An amplification-free whole genome sequencing library was constructed using the Ligation Sequencing Kit (No ...
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bioRxiv - Genomics 2024Quote: ... sequencing was performed on a NextSeq 2000 (Illumina, San Diego, California, USA) with 100 bp single end reagent kits.
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bioRxiv - Genomics 2024Quote: ... Sequencing of the libraries was performed with HiSeq2500 (Illumina, San Diego, CA, USA), with 100 bp single end reagent kits.
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bioRxiv - Genomics 2024Quote: ... Sequencing was performed on a NextSeq 2000 (Illumina, San Diego, California, USA) with 100 bp single end reagent kits.
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bioRxiv - Genomics 2024Quote: ... and DNA methylation quantification using the Infinium MethylationEPIC BeadChIP (Illumina) processed on an Illumina iScan system following the manufacturer’s standard protocol (PMID ...
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bioRxiv - Genomics 2024Quote: ... then sample pools were diluted to 2nM in RSB plus Tween 20 (Illumina, supplied with NextSeq reagents). 2nM pools for each kit were prepared for sequencing on a NextSeq 2000 (Illumina ...
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bioRxiv - Genomics 2024Quote: ... Total RNA-seq libraries were then generated using TruSeq Stranded mRNA Library Prep kit and TruSeq RNA Single Indexes kits A and B (Illumina, San Diego, CA) omitting the poly-A selection step and starting from the fragmentation step ...
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bioRxiv - Immunology 2024Quote: ... libraries were generated with the Nextera XT kit (Illumina) using 500 pg of cDNA as per the manufacturer’s instructions ...
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bioRxiv - Immunology 2024Quote: ... and sequenced (paired end 150nt) on an Illumina NovaSeq 6000 system (Illumina).
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bioRxiv - Immunology 2024Quote: ... The Ribo-Zero Gold (Human/Mouse/Rat) and (Yeast) kit (Illumina, San Diego, CA) were used to deplete rRNA using 300 ng total RNA as input ...
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bioRxiv - Genetics 2024Quote: ... and barcoded using Nextera XT DNA Library Prep Kit (Illumina) per the manufacturer’s protocol ...
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bioRxiv - Genomics 2024Quote: ... and generated 80.00 million PE 150-bp reads (Illumina NovaSeq; FGCZ, Switzerland).
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bioRxiv - Genomics 2024Quote: ... Base calling was done by Illumina RTA3 and output of NCS was demultiplexed and converted to FastQ format with Illumina Bcl2fastq (v1.9.0).
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bioRxiv - Genomics 2024Quote: ... RNA-seq libraries were prepared from 200ng RNA using the Illumina Truseq stranded mRNA library prep (Illumina, 20020595) after depletion of ribosomal RNA with Ribo Zero Gold (Illumina ...
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bioRxiv - Genomics 2024Quote: ... Subsequent methylation analysis was performed on an Illumina (San Diego, CA, USA) iScan platform using the Infinium MethylationEPIC BeadChip according to standard protocols provided by Illumina. Briefly ...
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bioRxiv - Genomics 2024Quote: ... The final barcoded library was pooled on a quarter S4 flow cell in 2x150 bp paired-end mode on an Illumina NovaSeq sequencer (Illumina, USA). Hi-C library preparation and sequencing were done at the Norwegian Sequencing Centre (Oslo ...
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bioRxiv - Genomics 2024Quote: ... after depletion of ribosomal RNA with Ribo Zero Gold (Illumina, 20037135). Both whole-transcriptome amplification and sequencing library preparations were performed in two 96-well plates with half the samples each ...
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bioRxiv - Genomics 2024Quote: We followed the general GATK version 4 Best Practices to call genetic variants from Illumina RNA-seq data ...