Labshake search
Citations for Illumina :
451 - 500 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2024Quote: Raw base call files were obtained from Illumina BaseSpace or AVITI storage and were used to generate fastq files using bcl2fastq v2.20.0.422 or bases2fastq version 1.5.0.962525890 ...
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bioRxiv - Molecular Biology 2024Quote: ... The libraries were sequenced on an Illumina Hiseq 2500 platform (Illumina, Inc.) using single-end 50 bp reads.
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Regulation of Diseases-Associated Microglia in the Optic Nerve by Lipoxin B4 and Ocular HypertensionbioRxiv - Molecular Biology 2024Quote: ... The raw sequencing reads were demultiplexed by Illumina bcl2fastq2 software ...
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Regulation of Diseases-Associated Microglia in the Optic Nerve by Lipoxin B4 and Ocular HypertensionbioRxiv - Molecular Biology 2024Quote: ... for sequencing on a NOVAseq S4 flow cell (Illumina). Library preparation and RNA-seq were performed at QB3 Genomics ...
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bioRxiv - Molecular Biology 2024Quote: ... RNA-seq libraries were constructed from qualified RNA samples using TruSeq Stranded mRNA Library Prep Kit (Illumina). RNA-seq was performed on an Illumina Nova Seq 6000 platform with a 101 bp paired-end protocol.
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bioRxiv - Microbiology 2024Quote: Extracted DNA and cDNA were submitted to Georgia Institute of Technology’s Molecular Evolution Core where for sequencing using the Illumina MiSeq v3 kit PE300 using Illumina Nextera Adapter Sequences (Illumina Inc, San Diego, California, USA). The samples were demultiplexed and barcodes removed by the sequencing core ...
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bioRxiv - Molecular Biology 2024Quote: ... Sequencing was performed on Illumina NextSeq 500 using TruSeq Rapid SBS Kits (#FC-402-4002, Illumina), according to the manufacturer’s instructions ...
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bioRxiv - Molecular Biology 2024Quote: Raw sequencing reads were de-multiplexed using bcl2fastq (Illumina). Trimming ...
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bioRxiv - Molecular Biology 2024Quote: ... stranded libraries were prepared and sequenced on a NovaSeq 6000 Sequencing System (Illumina, San Diego, CA, USA) to an average depth of ∼54 million read pairs (2×150 bp reads).
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bioRxiv - Molecular Biology 2024Quote: ... QHR-4C libraries were constructed with specific primer pairs (forward primers containing Illumina P5 with sequences near a specific viewpoint and reverse primers containing Illumina P7 with an index and sequences matching the adapter ...
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bioRxiv - Microbiology 2024Quote: ... Ribosomal RNA was removed using Ribo-Zero rRNA Depletion Kit (Illumina) and paired-end sequencing (2×150 bp ...
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bioRxiv - Genomics 2024Quote: ... the paired-end (PE 150bp) library was generated using the Illumina TruSeq DNA Nano Preparation Kit (Illumina, San Diego, CA, USA), and the library was sequenced on an Illumina HiSeq 2500 platform following the manufacturer’s instructions ...
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bioRxiv - Molecular Biology 2024Quote: Bacterial populations in psyllids were analyzed using the MiSeq system (Illumina), as described previously (Nakabachi ...
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bioRxiv - Molecular Biology 2024Quote: ... and 250 bp of both ends were sequenced on the MiSeq platform (Illumina) with MiSeq Reagent Kit v2 (500 cycles ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Sequencing was performed on a NovaSeq 6000 (Illumina Inc., San Diego, USA) at the Australian Genome Research Facility (Melbourne ...
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bioRxiv - Evolutionary Biology 2024Quote: We demultiplexed reads of both DNA and cDNA sequencing and trimmed adapters with bcl2fastq v2.20 (Illumina, 2017) allowing for up to two mismatches in the barcode and discarding trimmed reads shorter than 20 base pairs (bp) ...
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bioRxiv - Molecular Biology 2024Quote: Using the bcl2fastq v2.18 program (Illumina Inc.), the raw MiSeq data were first converted to FASTQ files ...
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bioRxiv - Evolutionary Biology 2024Quote: ... sequencing libraries were prepared from 1μg DNA using the TruSeq PCRfree DNA sample preparation kit (cat# FC-121-3001/3002, Illumina Inc.). The library preparation was performed according to the manufacturers’ instructions (guide#15036187).
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bioRxiv - Evolutionary Biology 2024Quote: ... We used a MiSeq system (Illumina Inc. San Diego, CA, USA) to perform 250-bp paired end sequencing on the prepared libraries (Illumina MiSeq Kit V2 500 cycles).
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bioRxiv - Evolutionary Biology 2024Quote: ... to perform 250-bp paired end sequencing on the prepared libraries (Illumina MiSeq Kit V2 500 cycles).
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bioRxiv - Evolutionary Biology 2024Quote: Sequencing was performed with MiSeq (Illumina Inc.) paired-end 300bp read length and v3 sequencing chemistry ...
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bioRxiv - Developmental Biology 2024Quote: Samples were sequenced on an Illumina HiSeq4000 instrument according to manufacturer’s instructions (Illumina). Sequencing was carried out using 2x150 paired-end (PE ...
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bioRxiv - Developmental Biology 2024Quote: ... and were sequenced in a NextSeq 500 (Illumina) using NextSeq v2.5 chemistry with Illumina protocol #15048776 ...
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bioRxiv - Developmental Biology 2024Quote: ... Libraries for sequencing were prepared from 600pg cDNA input using Nextera XT library preparation kit (Illumina, Cat: FC-131-1096) with i7 primers from Illumina (N70X ...
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bioRxiv - Developmental Biology 2024Quote: ... with i7 primers from Illumina (N70X) together with a custom P5 primer (see Drop-seq protocol) ...
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bioRxiv - Developmental Biology 2024Quote: ... Libraries were sequenced by using Nextseq2000 (Illumina), where length of read 1 was 28 bp and read 2 was 120 bp long.
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bioRxiv - Molecular Biology 2024Quote: ... and sequenced on a NovaSeq 6000 Sequencing System (Illumina) to an average depth of ∼20 million read pairs (2×150 bp reads).
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bioRxiv - Molecular Biology 2024Quote: Raw sequencing reads were de-multiplexed using bcl2fastq (Illumina). Adapters were trimmed using cutadapt (v.1.18 ...
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bioRxiv - Developmental Biology 2024Quote: ... and sequenced on the HiSeq 2500 Sequencing System (Illumina, San Diego, CA) with 100-bp paired end reads.
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bioRxiv - Microbiology 2024Quote: ... RNA sequencing was performed on an Illumina NovaSeq S1 PE100bp to obtain 1.6 billion reads (Illumina Inc, San Diego, California, USA). Samples were demultiplex and barcodes removed by the core facilities prior to releasing sequences.
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bioRxiv - Molecular Biology 2024Quote: The clustering of the index-coded samples was performed on a cBot Cluster Generation System using TruSeq PE Cluster Kit v3-cBot-HS (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Molecular Biology 2024Quote: ... Library of polyA-containing mRNA (350 bp size) was prepared using TruSeq Stranded mRNA Library Prep kit (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Molecular Biology 2024Quote: ... Sequencing of pooled libraries was done using a NextSeq 500 (Illumina) and sequence reads were aligned to a combination of the human genome reference (GRCh38 ...
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bioRxiv - Developmental Biology 2024Quote: ... The Annoroad Corporation performed the strand-specific sequencing libraries preparation and PE150 sequencing on the NovaSeq 6000 (Illumina) platform ...
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bioRxiv - Developmental Biology 2024Quote: ... Paired-end 150-bp (PE150) sequencing was further performed on a HiSeq X10 (Illumina) at Berry Genomics ...
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bioRxiv - Developmental Biology 2024Quote: ... Multiplexed libraries were sequenced on a NovaSeq 6000 system (Illumina) as paired-end ...
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bioRxiv - Developmental Biology 2024Quote: ... Libraries were multiplexed using Nextera index adapter oligos (Illumina) and quantified by Qubit (Invitrogen) ...
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bioRxiv - Developmental Biology 2024Quote: DNA-sequencing libraries were prepared using the DNA Prep kit (Illumina) with 500 ng of whole genome-amplified DNA (single PGC samples ...
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bioRxiv - Developmental Biology 2024Quote: ... RNA-sequencing was performed on a HiSeq 2500 (Illumina) System at the NKI Genomics Core Facility.
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bioRxiv - Developmental Biology 2024Quote: ... and paired-end sequenced on a Nextseq™ 500 (Illumina), high output ...
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bioRxiv - Developmental Biology 2024Quote: ... sequencing libraries were prepared with TruSeq small RNA primers (Illumina) and paired-end sequenced on a Nextseq™ 500 (Illumina) ...
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bioRxiv - Molecular Biology 2024Quote: ... The libraries were combined with the PhiX Control v3 (Illumina), and 250 bp of both ends were sequenced on the MiSeq platform (Illumina ...
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bioRxiv - Molecular Biology 2024Quote: ... Dual indices and Illumina sequencing adapters were attached to the amplicons with index PCR using Nextera XT Index Kit v2 (Illumina). The libraries were combined with the PhiX Control v3 (Illumina) ...
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bioRxiv - Biophysics 2024Quote: ... An indexed-fragment library per sample was arranged from 500 ng total RNA using Illumina Stranded mRNA Prep ligation kit (Illumina) as per manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2024Quote: ... RNA-seq libraries were generated using Truseq RNA Access Library Prep Kits (TruSeq RNA Exome kits; Illumina) and sequenced on NextSeq500 sequencers using 75□bp paired-end sequencing method (Illumina ...
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bioRxiv - Neuroscience 2024Quote: ... Genome-wide DNA methylation was then performed using the Infinium HumanMethylationEPIC Bead Chip (Illumina). The resulting raw intensity (.idat ...
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bioRxiv - Cancer Biology 2024Quote: ... and library preparation was conducted using the Tru-Seq Stranded Total RNA with Ribo-Zero Gold kit protocol (Illumina). Libraries were sequenced on a HiSeq4000 sequencer using the paired-end 150 bp read option ...
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bioRxiv - Systems Biology 2024Quote: ... Libraries were sequenced on the Hiseq4000 platform (Illumina) to a target depth of 50,000 reads per cell.
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Targeted Perturb-seq Reveals EGR1 and FOS as Key Regulators of the Transcriptional RAF-MAPK ResponsebioRxiv - Systems Biology 2024Quote: bcl2fastq (v2.20.0 by Illumina) was used to demultiplex and convert raw sequencing data to fastq files ...
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bioRxiv - Neuroscience 2024Quote: ... Individually barcoded libraries were pooled and sequenced on a NextSeq mid-output paired-end sequencing run at 2×75 using NextSeq 500/550 Mid-Output v2.5 kit (Illumina, San Diego, CA, USA) according to the manufacturer’s instructions ...