Labshake search
Citations for Illumina :
51 - 100 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Evolutionary Biology 2024Quote: ... followed by paired-end sequencing (2 × 150 bp) on an Illumina Novaseq 6000 platform (Illumina, San Diego, CA, USA). For the long-read sequencing ...
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bioRxiv - Evolutionary Biology 2024Quote: ... All sublibraries were pooled equimolarly and sequenced on NovaSeq 6000 platform (Illumina) using the SP reagent kit v1.5 in 2×150 bp configuration at the Institute of Experimental Botany ...
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bioRxiv - Evolutionary Biology 2024Quote: ... and NextSeq 500 Mid Output Kit PE75 (120 M reads) (Illumina) were used following manufacturer’s instructions ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Coates Genomics Sequencing Lab (Berkeley, CA) on an Illumina NovaSeq platform 6000 (Illumina, CA) to generate approximately 100 million 2 x 150 bp read pairs per GB genome size.
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bioRxiv - Evolutionary Biology 2024Quote: ... we fitted the coverage data along the chromosomes at two timepoints (first Illumina sequencing and second nanopore sequencing ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Libraries were made according to the manufacturer’s directions for the TruSeq Small RNA Library Prep Kit (Illumina, Cat. No. RS-200-0012). Resulting libraries were size selected for 145-160bp fragments using Novex 6% TBE gels (Invitrogen ...
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bioRxiv - Evolutionary Biology 2024Quote: ... sequenced on a NovaSeq6000 (Illumina Inc.). After demultiplexing ...
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bioRxiv - Genetics 2024Quote: ... The MiSeq and Reagent Kit v3 (600 cycles) (Illumina, MS-102-3003) were used for sequencing ...
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The transcriptomic landscape of monosomy X (45,X) during early human fetal and placental developmentbioRxiv - Genetics 2024Quote: ... The Illumina Global Screening Array platform was used (v3.0) (Infinium HTS Assay Reference Guide (# 15045738 v04) (Illumina, Inc. San Diego, CA, USA). Output data were analyzed in Illumina Genome Studio version 2.0 ...
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bioRxiv - Genetics 2024Quote: ... Libraries for sequencing were prepared according to the manufacturer’s instructions with TruSeq Stranded Total RNA Library Prep Kit with Ribo-Zero Gold (Illumina, RS-122-2301), and paired-end sequencing was done with a NovaSeq 6000 instrument (Illumina) ...
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bioRxiv - Genetics 2024Quote: ... and paired-end sequencing was done with a NovaSeq 6000 instrument (Illumina). Read quality control was done using FastQC and Trimmomatic (29) ...
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bioRxiv - Genetics 2024Quote: The process of library construction involved the purification of messenger RNA from total RNA using magnetic beads attached to poly-T oligos (TruSeq RNA Sample Prep Kit v2, Illumina Inc.). Subsequently ...
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bioRxiv - Genetics 2024Quote: ... The library was sequenced with a paired-end (2 × 150 bp) setting using the Illumina X Ten Sequencing System (Illumina, San Diego, CA, USA). The transcriptome data of muscle tissue in 131 hybrid individuals was obtained using DNA nanoball (DNBSEQ-T7 ...
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bioRxiv - Developmental Biology 2024Quote: ... Barcoded cDNA libraries were multiplexed onto a TruSeq paired-end flow cell and sequenced (100-bp paired-end reads) with a TruSeq 200-cycle SBS kit (Illumina). Samples were run on Illumina HiSeq2500 sequencers located at the KUMC Genome Sequencing Facility ...
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bioRxiv - Developmental Biology 2024Quote: ... Pellets were resuspended in 50 µL of transposition reaction (2X TD buffer, 1X PBS, 0.1% Tween-20, 0.1% Digitonin, 5µL of Illumina Tn5 transposase) and incubated for 30 min at 37°C with 1,000 rpm agitation ...
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bioRxiv - Developmental Biology 2024Quote: ... 200 pg of cDNA were used with the Nextera XT kit (Illumina, FC-131-1096). Library molarity and quality was assessed with the Qubit and TapeStation using a DNA High sensitivity chip (Agilent Technologies) ...
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bioRxiv - Genetics 2024Quote: ... according to manufacturer’s protocols (Illumina Inc.). Quality control for individual and variant data was completed as previously described (https://github.com/neurogenetics/GWAS-pipeline) ...
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bioRxiv - Developmental Biology 2024Quote: ... Sequencing was done using NovaSeq v1.5 STD (Illumina protocol #1000000106351 v03) for around 100,000 reads per cell ...
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bioRxiv - Developmental Biology 2024Quote: ... library construction was immediately carried out using a Chromium Single Cell 3’ Reagent Kit (Version 3) and sequenced on an Illumina HiSeq 4000 or an Illumina NextSeq2000 (Illumina, cat no. 20040559) by the Technion Medicine Faculty Azrieli-Technion Genomics Center ...
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bioRxiv - Developmental Biology 2024Quote: ... Poly-dT pull down enrichment of mRNA was performed before sequencing 101 bp paired-end reads on an Illumina NovaSeq 6000 (Illumina), generating between 37 and 57 million read pairs per sample ...
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bioRxiv - Developmental Biology 2024Quote: ... and sequenced on a NovaSeq6000 instrument (Illumina).
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bioRxiv - Developmental Biology 2024Quote: ... libraries were prepared (TruSeq Stranded Total RNA kit from Illumina) and sequenced on a NovaSeq6000 instrument (Illumina).
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bioRxiv - Developmental Biology 2024Quote: ... using the Nextera XT kit (Illumina). Libraries were assessed by Tapestation and Bioanalyzer with a DNA High Sensitivity Chip ...
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bioRxiv - Developmental Biology 2024Quote: ... Libraries were then 101 bp paired-end sequenced on an Illumina HiSeq 4000 (Illumina)
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bioRxiv - Genetics 2024Quote: ... Bcl2fastq2 Conversion Software (Illumina) was used to generate de-multiplexed Fastq files ...
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bioRxiv - Evolutionary Biology 2024Quote: ... We extracted DNA from silica-dried leaf tissues using a modified CTAB protocol and performed whole-genome Illumina library preparations and sequencing to ∼10x depth using 150-bp paired-end reads generated on the NovaSeq (Illumina Inc.) platform at Duke University ...
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bioRxiv - Developmental Biology 2024Quote: ... Paired-end sequencing was performed on NextSeq 500 (Illumina).
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bioRxiv - Developmental Biology 2024Quote: ... and sequenced on a NovaSeq 6000 system (Illumina).
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bioRxiv - Developmental Biology 2024Quote: ... bacterial 16S rRNA amplicons were built via amplification of the V4 region of the 16S rRNA gene using the U515F/806R primer pair39 and processed for paired-end sequencing by MiSeq (Illumina) as previously described11,39,40 ...
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bioRxiv - Developmental Biology 2024Quote: ... Libraries were sequenced using the NextSeq500 platform (Illumina, Donnelly Sequencing Centre ...
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bioRxiv - Developmental Biology 2024Quote: ... seven cDNA libraries were generated using the TruSeq RNA Sample Preparation kit (Illumina) with 150 base pair read length ...
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bioRxiv - Developmental Biology 2024Quote: ... The leftover cells were pelleted via centrifugation and collected for DNA isolation for genotyping purposes with HumanCytoSNP-12 v2.1 BeadChip Kit (Illumina). The single cell library preparation was done using Chromium Controller instrument ...
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bioRxiv - Developmental Biology 2024Quote: ... Sequencing libraries were prepared from equal quantities of rRNA-depleted RNA using TruSeq Stranded total RNA LT kit (Illumina) according to manufacturer’s instructions using 11 cycles of enrichment PCR ...
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bioRxiv - Developmental Biology 2024Quote: ... 1 µg of DNAse-treated RNA was treated with RiboZero Gold (Human/Mouse/Rat) kit (Illumina) to remove rRNAs ...
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bioRxiv - Developmental Biology 2024Quote: ... Sequencing was performed using the Illumina Nextseq500 platform (Illumina Inc, San Diego, CA,USA) with the following sequencing conditions ...
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bioRxiv - Developmental Biology 2024Quote: ... All libraries were sequenced on NextSeq 2000 (Illumina) (Read 1 ...
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bioRxiv - Developmental Biology 2024Quote: ... Libraries were multiplexed and sequenced using P2 and P3 (100 Cycles) reagents on a NextSeq 2000 device (Illumina, Table 1S). Sequencing data was demultiplexed and converted to FASTQ format using bcl2fastq2 v2.20 (Illumina ...
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bioRxiv - Developmental Biology 2024Quote: ... Sequencing data was demultiplexed and converted to FASTQ format using bcl2fastq2 v2.20 (Illumina) and count matrices were generated with Cellranger v5.0.1 (10X Genomics ...
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bioRxiv - Developmental Biology 2024Quote: ... The final pool contained 16 samples each with 10000 cells per time point and they were sequenced on NovaSeq 6000 platform using NovaSeq 6000 S4 Reagent Kit v1.5 /200 cycles (Illumina) with 28×10×10×90 configuration run leading to 70000 reads/cell.
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bioRxiv - Developmental Biology 2024Quote: ... Samples were then processed with the Illumina Infinium HumanMethylation450 BeadChip (Illumina Inc., San Diego, CA). Quality control occurred separately in each cohort18 and data from both cohorts were then normalized together as a single set to minimize technical variability ...
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bioRxiv - Genetics 2024Quote: ... and sequenced on an Illumina NovaSeq 6000 (Illumina, San Diego, CA) with paired-end 150 bp reads ...
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bioRxiv - Genetics 2024Quote: ... with sequencing on the NovaSeq 6000 platform (Illumina, San Diego, CA, USA). We checked the quality of the FASTQ files using FASTQC (https://www.bioinformatics.babraham.ac.uk/projects/fastqc/ ...
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bioRxiv - Genetics 2024Quote: ... spiked with 20% PhiX (Illumina) to increase the complexity of the libraries to accommodate clustering and sequenced in an Illumina MiSeq (75 bp ...
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bioRxiv - Genetics 2024Quote: ... The rRNA was removed using the Ribo-Zero rRNA removal kit (Illumina) as per recommendations ...
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bioRxiv - Developmental Biology 2024Quote: ... 2.5𝜇l Tagment DNA enzyme I (Illumina) and 22.5𝜇l nuclease-free water for 30min at 37°C ...
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bioRxiv - Evolutionary Biology 2024Quote: ... using the MiSeq Reagent Kit v3 supporting 600-cycles of 2 x 300 paired-end reads (Illumina). The resulting sequence reads were filtered following a cut-off of Phred quality scores ≥30 and read length ≥75 bases ...
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bioRxiv - Developmental Biology 2024Quote: ... 150 cycles flow cells (Illumina, 20024907). Library preparations of one sample per genotype were run on a single flow cell ...
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bioRxiv - Evolutionary Biology 2024Quote: ... and paired-end libraries were constructed according to the Illumina TruSeq DNA PCR-Free Low Throughput Library Prep Kit (Illumina). The four paired-end libraries were quantified by qPCR using the KAPA Library Quantification Kit (Roche) ...
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bioRxiv - Developmental Biology 2024Quote: ... and all plasmids were verified by Illumina sequencing before being used to transform plants via the floral dip method.30,52
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bioRxiv - Developmental Biology 2024Quote: ... BCL Convert Conversion Software v4.0 (Illumina) generated de-multiplexed Fastq files ...