Labshake search
Citations for Illumina :
8551 - 8600 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Microbiology 2023Quote: ... and sequenced (paired-end 2×75-bp) in a NextSeq500 instrument (Illumina). Alignment to the reference genome sequence of Listeria monocytogenes EGDe (RefSeq ...
-
bioRxiv - Microbiology 2023Quote: ... Ribodepletion RNA library and sequencing was performed at the Oxford Genomics Centre using a NovaSeq6000 sequencing system (Illumina). Three biological samples per condition were sequenced.
-
bioRxiv - Microbiology 2023Quote: ... A 5% PhiX control (Illumina, San Diego, CA, USA) along with positive (DNA sample extracted from the healthy gut ...
-
bioRxiv - Microbiology 2023Quote: ... ribosomal RNA was depleted using RiboZero (Illumina). Libraries were prepared using NEBNext Ultra II Directional RNA library prep kit (without size selection ...
-
bioRxiv - Microbiology 2023Quote: ... A positive control (prepared bacteriophage Phi X library) provided by Illumina is spiked into every lane at a concentration of 0.3% to monitor sequencing quality in real time.
-
bioRxiv - Microbiology 2023Quote: ... Hybrid assemblies were generated from Illumina and Oxford Nanopore reads using Unicycler version 0.4.8 and assembly quality was assessed using QUAST version 5.0.2 [32,33] ...
-
bioRxiv - Microbiology 2023Quote: ... C and D (Illumina). Amplicon concentration across samples was normalized to 200 ng/μl using the Qubit high sensitivity dsDNA assay before pooling ...
-
bioRxiv - Microbiology 2023Quote: ... Adapter sequences were trimmed from Illumina sequencing reads using Trimmomatic v0.39 ...
-
bioRxiv - Microbiology 2023Quote: Libraries were prepared for metagenomic sequencing using the Nextera DNA Flex Library Prep kit (Illumina 20018705). Samples collected at four “key” timepoints (days -28 ...
-
bioRxiv - Microbiology 2023Quote: ... Sequencing was performed at the DOE Joint Genome Institute (JGI) on a NovaSeq (Illumina) resulting in paired-end reads of 151 base pairs in length ...
-
bioRxiv - Microbiology 2023Quote: ... Sequencing was performed on an Illumina MiSeq instrument (Illumina, San Diego, CA) at the Environmental Sample Preparation and Sequencing Facility at Argonne National Laboratory (Lemont ...
-
bioRxiv - Microbiology 2023Quote: ... using a 600 (2×300 base pair) cycle reagent kit (Illumina Inc, San Diego, CA).
-
bioRxiv - Microbiology 2023Quote: ... and sequenced on either a MiSeq or NextSeq 550 instrument (Illumina) using a 300 or 150 bp paired-end protocol ...
-
bioRxiv - Microbiology 2023Quote: ... 16S rRNA gene amplicon libraries targeting the V1-V3 or V4 region were constructed using a dual-indexing method and sequenced on a MiSeq with a 2×300 bp run format (Illumina, San Diego, CA). Reagent-only negative controls were carried through the DNA extraction and sequencing process.
-
bioRxiv - Microbiology 2023Quote: Total RNA libraries were prepared with TruSeq Stranded Total RNA kit (Illumina) according to the manufacturer’s instructions and sequenced with an Illumina HiSeq2500 (50 bp single- end) ...
-
bioRxiv - Immunology 2023Quote: ... The barcoded libraries were sequenced on a NovaSeq 6000 platform (Illumina) by Novogene (Cambridge ...
-
bioRxiv - Microbiology 2023Quote: ... Sequencing was conducted on an Illumina MiSeq using a paired-end 2 x 300 base-pair method (Illumina, San Diego, CA, USA). We estimated this should provide a mean of 60 000 reads per sample ...
-
bioRxiv - Immunology 2023Quote: ... Samples were sequenced using 150-bp paired-end reads using NovaSeq 6000 (Illumina).
-
bioRxiv - Microbiology 2023Quote: Viral RNA from 127 of 134 total samples were sequenced by the Illumina NovaSeq6000 (Illumina, San Diego) with 150 bp paired-end reads ...
-
bioRxiv - Microbiology 2023Quote: ... following the protocol provided by Illumina. Further ...
-
bioRxiv - Microbiology 2023Quote: ... and libraries were sequenced on the NextSeq 550 sequencing platform (Illumina, San Diego, CA) at the Microbial Genome Sequencing Center (MiGS) ...
-
bioRxiv - Microbiology 2023Quote: Sequencing library has been paired-end sequenced on Miseq platform (Illumina) with MiSeq Reagent Kit v3 allowing 600 sequencing cycles to be performed ...
-
bioRxiv - Microbiology 2023Quote: The complete D4759 genome was assembled by integrating the short-read data from Illumina sequencing with long-read data from Oxford Nanopore sequencing using the Unicycler hybrid assembly pipeline (46) ...
-
bioRxiv - Microbiology 2023Quote: ... set A indexes (Illumina) using Kapa HiFi master mix (Roche ...
-
bioRxiv - Microbiology 2023Quote: The 16S rRNA gene amplicons generated by Illumina MiSeq were used to estimate the diversity and composition of the bacterial communities present in each soil and MSB sample ...
-
bioRxiv - Microbiology 2023Quote: ... Resultant genomic DNA was treated with RNase A and prepared for sequencing using the Nextera XT kit (Illumina Corp., San Diego, CA). Libraries were uniquely dual-indexed and pooled ...
-
bioRxiv - Microbiology 2023Quote: ... Sequencing libraries were constructed using the TruSeq Total RNA Library Preparation Protocol (Illumina). Host ribosomal RNA (rRNA ...
-
bioRxiv - Microbiology 2023Quote: ... 301 bp indexed reads were generated on an Illumina MiSeq™ platform (Illumina).
-
bioRxiv - Microbiology 2023Quote: ... Adapters were added using the Nextera XT DNA library preparation kit (Illumina) with 40% of the suggested final volume ...
-
bioRxiv - Immunology 2023Quote: ... Libraries were prepared usingL---Lkit (Illumina) and were sequenced on Illumina Novaseq for paired-end 100bps using standard Illumina sequencing primers ...
-
bioRxiv - Immunology 2023Quote: ... The final pooled library was sequenced for around 2,400 miRNAs using the Illumina MiSeq system (Illumina, Inc., USA).
-
bioRxiv - Immunology 2023Quote: ... 3’ adapters (Illumina Universal Adapter, Illumina Multiplexing Adapter ...
-
bioRxiv - Microbiology 2023Quote: ... MiSeq Reagent Kit v3 was used according to the manufacturer’s instruction (Illumina Inc., San Diego, CA) and paired-end 250 bp sequences were generated ...
-
bioRxiv - Immunology 2023Quote: ... RNA library was prepared using the TruSeq Stranded Total RNA Library Prep Gold (Ribozero) kit (Illumina) following manufacturer’s instructions ...
-
bioRxiv - Immunology 2023Quote: ... it was heat-fragmented at 95°C for 25 min and the ends were repaired with TruSeq Ribo Profile PNK (Illumina). RNA was then cleaned using a modified RNA Clean & Concentrator-5 kit (Zymo Research ...
-
bioRxiv - Immunology 2023Quote: ... Single cell libraries were prepared from 10,000 cells per pooled sample and sequenced with the NextSeq1000 (Illumina, San Diego, CA, USA) at a depth of > 30,000 paired reads per cell ...
-
bioRxiv - Immunology 2023Quote: ... and the nuclei incubated for 2 hours at 37°C with 50μl of TDE1/TD transposase reaction mix (Illumina). Tagmented DNA was then purified using the MinElute kit (Qiagen ...
-
bioRxiv - Immunology 2023Quote: ... NexteraXT V2 primers (Illumina) were used to allow larger scale multiplexing ...
-
bioRxiv - Immunology 2023Quote: ... before being sequenced on the HiSeq 4000 system (Illumina), with paired-end read lengths of 50bp and at least 50-80 million uniquely mapped reads per sample.
-
bioRxiv - Immunology 2023Quote: ... 2.5μl Nextera XT V2 i5 primer and 2.5μl Nextera XT V2 i7 primer (Illumina). NexteraXT V2 primers (Illumina ...
-
bioRxiv - Immunology 2023Quote: ... All libraries were then sequenced using the HiSeq 4000 system (Illumina) with paired-end read lengths of 100bp and at least 25 million reads per sample.
-
bioRxiv - Immunology 2023Quote: ... The 10x Chromium libraries were prepared and sequenced (paired-end reads) using the NovaSeq 6000 (Illumina).
-
bioRxiv - Immunology 2023Quote: ... All libraries were then sequenced using the HiSeq 4000 system (Illumina) with paired-end read lengths of 100bp and at least 25 million reads per sample.
-
bioRxiv - Immunology 2023Quote: Library preparation for RNA-seq was performed using the TruSeq® Stranded Total RNA Sample Preparation Guide (Illumina). The barcoded libraries were sequenced on a NovaSeq 6000 platform (Illumina ...
-
bioRxiv - Immunology 2023Quote: ... we used the TruSeq Ribo Profile kit (Illumina) to process them according to the manufacturer’s instructions ...
-
bioRxiv - Microbiology 2023Quote: ... The library was then sequenced on an Illumina platform (Illumina, USA) and 250 bp paired-end reads were generated.
-
bioRxiv - Microbiology 2023Quote: ... ChIP-Seq libraries were prepared using the DNA Sample Prep Kit (Illumina) following manufacturer instructions ...
-
bioRxiv - Microbiology 2023Quote: ... Separate libraries for the two experimental conditions belonging to three independent experiments were prepared with the TruSeq RNA Sample Prep kit (Illumina, San Diego, CA) according to the manufacturer’s protocol ...
-
bioRxiv - Immunology 2023Quote: ... prior to sequencing using the NextSeq™ 550 system (Illumina).
-
bioRxiv - Immunology 2023Quote: ... Libraries were generated using the Nextera XT DNA library prep kit (Illumina). 25 million reads per sample was performed using a HiSeq2500 (Illumina ...