Labshake search
Citations for Illumina :
8701 - 8750 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Molecular Biology 2023Quote: ... followed by sequencing on the HiSeq 4000 (Illumina) platform in PE150 mode ...
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bioRxiv - Microbiology 2023Quote: Short and long reads from Illumina and ONT sequencing ...
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bioRxiv - Microbiology 2023Quote: ... Libraries were sequenced on an lllumina NovaSeq 6000 (Illumina, San Diego, USA) using a 250 bp paired end protocol ...
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bioRxiv - Microbiology 2023Quote: ... Illumina TruSeq SBS v4 reagent kit (300 cycles) was used to generate paired-end 150 bp reads using the Illumina HiSeq platform (Illumina, San Diego CA, USA). Initial quality check was done with FastQC (v0.11.6 ...
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bioRxiv - Microbiology 2023Quote: ... Barcoded products were mixed and sequenced with a MiSeq PE300 v3 flow cell (Illumina).
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bioRxiv - Microbiology 2023Quote: ... Next generation sequencing was performed using NextSeq (Illumina, USA), and the obtained data were analyzed using MAGeCK software ...
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bioRxiv - Molecular Biology 2023Quote: ... followed by strand-specific cDNA NGS library preparation (NEBNext Ultra II Directional RNA Library Prep Kit for Illumina, NEB). The size of the resulting library was controlled by use of a D1000 ScreenTape (Agilent 2200 TapeStation ...
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bioRxiv - Microbiology 2023Quote: We sequenced strains with genome modifications using either short-read (Illumina) or long-read (Nanopore ...
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bioRxiv - Molecular Biology 2023Quote: ... Paired-end 150Lbp sequencing was performed on a NEXTSeq550 (Illumina) platform and each sample was targeted for 10 million reads ...
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bioRxiv - Microbiology 2023Quote: Hybridization capture was performed with an Illumina RNA Prep with Enrichment (L) Tagmentation kit (Illumina #20040537), IDT for Illumina DNA/RNA UD Indexes (Illumina #20027213) ...
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bioRxiv - Microbiology 2023Quote: ... IDT for Illumina DNA/RNA UD Indexes (Illumina #20027213), and Respiratory Virus Oligo Panel v2 (Illumina #20044311) ...
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bioRxiv - Molecular Biology 2023Quote: ... The resulting libraries were sequenced using the NextSeq 550 platform (Illumina) with single end 1x 86 bp setting ...
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bioRxiv - Molecular Biology 2023Quote: ... Samples were processed for using NextSeq 1000/2000 P2 Reagents (Illumina, San Diego, CA). Samples were sequenced on the Illumina Hi Seq 2000 platform in the UCL Genomics Facility ...
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bioRxiv - Molecular Biology 2023Quote: ... An input of 500 ng RNA was used to generate libraries (TruSeq RNA Library Prep v2, Illumina). Sequencing was performed on the NextSeq System (Illumina ...
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bioRxiv - Molecular Biology 2023Quote: ... Sequencing was performed on the NextSeq System (Illumina) to produce 132bp single-end reads.
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bioRxiv - Developmental Biology 2023Quote: ... Complementary DNA libraries from total RNA samples were prepared with Illumina TruSeq RNA preparation kits according to the manufacturer’s instructions (Illumina, San Diego, CA). RNA integrity was assessed using an Agilent 2100 Bioanalyzer (Santa Clara ...
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bioRxiv - Developmental Biology 2023Quote: ... or low pass sequencing with a MiSeq nano kit (Illumina) Paired end 100 cycle sequencing was performed on a NovaSeq 6000 (Illumina) ...
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bioRxiv - Developmental Biology 2023Quote: ... Barcoded cDNA libraries were multiplexed onto a TruSeq paired-end flow cell and sequenced (100-bp paired-end reads) with a TruSeq 200-cycle SBS kit (Illumina). Samples were run on an Illumina NovaSeq 6000 sequencer at the KUMC Genome Sequencing Facility ...
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bioRxiv - Developmental Biology 2023Quote: Libraries were prepared from 500 ng total RNA with the TruSeq Stranded Total RNA Library Prep Kit according to the manufacturer’s directions (Illumina). Paired-end 100-cycle sequencing was performed on HiSeq 2000 or HiSeq 2500 sequencers according to the manufacturer’s directions (Illumina).
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bioRxiv - Genetics 2023Quote: ... and iSeq 100 (Illumina).
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bioRxiv - Genetics 2023Quote: ... Paired-end sequencing (2 × 150 bases) of these amplicons was performed using iSeq 100 i1 Reagent v2 (#20031371; Illumina) and iSeq 100 (Illumina).
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bioRxiv - Developmental Biology 2023Quote: ... to an average read depth of 40 million reads per sample using the Illumina HiSeq platform (Illumina, San Diego, CA). The raw RNA sequencing data was examined using FastQC (https://www.bioinformatics.babraham.ac.uk/projects/fastqc/) ...
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bioRxiv - Genetics 2023Quote: Sequencing reads were de-multiplexed using the GenerateFASTQ module version 2.0.0 on iSeq 100 Software (Illumina). Analysis of on-target amplicon sequencing was performed using CRISPResso2 version 2.2.9 in batch mode [32].
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bioRxiv - Developmental Biology 2023Quote: ... Libraries were prepared from total RNA with the TruSeq Stranded Total RNA Library Prep Kit according to the manufacturer’s instructions (Illumina, PN 20020599). Libraries were analyzed for insert size distribution on a 2100 BioAnalyzer High Sensitivity kit (Agilent Technologies, ...
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bioRxiv - Developmental Biology 2023Quote: ... Paired end 100 cycle sequencing was performed on a NovaSeq 6000 (Illumina). For PCA analysis ...
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bioRxiv - Evolutionary Biology 2023Quote: ... TruSeq RNA Sample Preparation Kit v2 (Illumina) was used to prepare libraries for 100 bp paired-end RNA-seq ...
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bioRxiv - Evolutionary Biology 2023Quote: ... Libraries were constructed by following a previous protocol that optimizes reagent usage for microbial genomes [85] with the Nextera DNA Library Preparation Kit (Illumina, FC-121-1030) and sequenced on an Illumina HiSeq 2500 (UNH ...
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bioRxiv - Evolutionary Biology 2023Quote: ... Sequencing was carried out on either NextSeq 550 (Illumina) in house (4 runs ...
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bioRxiv - Evolutionary Biology 2023Quote: ... DNA libraries were made using TruSeq DNA PCR-free Library kit from Illumina as per the manufacturer’s instructions and were multiplexed based on concentrations measured with a Qubit Flourometer 2.0 (Invitrogen ...
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bioRxiv - Evolutionary Biology 2023Quote: ... While the mismatches could potentially arise from Illumina sequencing errors ...
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bioRxiv - Cancer Biology 2023Quote: ... of 1ug total RNA prepared into libraries prepared with the TruSeq Stranded Total RNA kit (Illumina Inc). Alignment of raw sequence reads to the human transcriptome (hg38 ...
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bioRxiv - Cancer Biology 2023Quote: ... The nucleic were further resuspended in transposition mix (Tagment DNA buffer (Illumina), PBS ...
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bioRxiv - Cancer Biology 2023Quote: ... and transposase 2.5ul/reaction (Illumina). After transposase reaction ...
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bioRxiv - Cancer Biology 2023Quote: ... NGS was performed at the Tumour Profiling Unit of the Institute of Cancer Research using NovaSeq 6000 (Illumina). 150 pair-end reads and 15% of PhiX was considered and approximately 5000 reads per time-point was aimed.
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bioRxiv - Cancer Biology 2023Quote: ... Single-end 75-bp reads were sequenced on the HiSeq2500 according to the manufacturer’s guidelines (Illumina). Reads were aligned to the human reference genome (hg19/GRCh37.p13 ...
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bioRxiv - Cancer Biology 2023Quote: ... and sequenced using a NovaSeq 6000 platform (Illumina). Reads were aligned to the hg38 human genome build using STAR and expression was quantified using the HTseq package ...
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bioRxiv - Cancer Biology 2023Quote: ... and sequenced by Novogene using a NovaSeq 6000 platform (Illumina).
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bioRxiv - Cancer Biology 2023Quote: ... and sequenced using NovaSeq (Illumina, San Diego, CA, USA). RNA-seq data were preprocessed using the nf-core/RNAseq pipeline version 3.9 ...
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bioRxiv - Neuroscience 2023Quote: ... The cDNA samples that passed quality control were used to generate sequencing libraries using the Nextera XT DNA Library Preparation Kit (Illumina), following the user guide ...
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bioRxiv - Cancer Biology 2023Quote: ... and sequenced with PE42 sequencing on the NovaSeq 6000 sequencer (Illumina). Reads were aligned using the BWA algorithm (mem mode ...
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bioRxiv - Cancer Biology 2023Quote: ... and tagmented using the enzyme and buffer provided in the Nextera Library Prep Kit (Illumina). Tagmented DNA was then purified using the MinElute PCR purification kit (Qiagen) ...
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bioRxiv - Cancer Biology 2023Quote: RNA libraries were prepared from 550 ng of total RNA from tumour samples using the TruSeq Stranded Total RNA HT kit with Ribo-Zero Gold (Illumina, San Diego, USA) as per manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2023Quote: ... subjected to paired end 75 sequencing on a NovaSeq platform (Illumina, San Diego, USA) at 40x depth.
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bioRxiv - Cancer Biology 2023Quote: ... and a total of 10 ng of RNA per sample were subjected to RNA sequencing using a version of the prime-seq protocol (51) Illumina paired end sequencing was performed on an HiSeq 1500 (Illumina, San Diego, CA, USA) instrument ...
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bioRxiv - Cancer Biology 2023Quote: ... Libraries were pooled and sequenced on NovaSeq 6000 (Illumina) to generate 30 million single-end 50-base pair reads for each sample.
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bioRxiv - Cancer Biology 2023Quote: ... we sequenced high-quality libraries (pre-checked on Bioanalyzer) on NovaSeq 6000 (Illumina) in pair-end mode using the NovaSeq 6000 S4 flow cell (300 Cycles ...
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bioRxiv - Cancer Biology 2023Quote: ... in single-end mode using the NextSeq 2000 P2 Reagents (100 Cycles) kit (Illumina, cat. no. 20040559). For scCUTseq experiments on TK6 cells ...
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bioRxiv - Cancer Biology 2023Quote: ... and were sequenced by Illumina NovaSeq 6000 sequencing machine with 150-bp paired-end reads by Beijing Novel Bioinformatics Co. ...
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Activation of glucocorticoid receptor signaling inhibits KSHV-induced inflammation and tumorigenesisbioRxiv - Cancer Biology 2023Quote: ... mRNA was isolated using Oligo(dT) beads and library was prepared following the Illumina TruSeq Stranded mRNA Library Prep Kit (Illumina, 20020594). Sequencing was carried out using Illumina HiSeq 3000 with the 50-bp single-read sequencing module ...
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bioRxiv - Cancer Biology 2023Quote: mRNA expression levels were obtained from the TCGA cBioportal (RSEM - Batch normalized from Illumina HiSeq_RNASeqV2). Correlations of ARID1A and KEAP1 were analyzed using all samples (n = 10,071) ...