Labshake search
Citations for Illumina :
8351 - 8400 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2023Quote: ... Libraries were sequenced using Illumina MiSeq sequencer (Illumina).
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bioRxiv - Microbiology 2023Quote: ... rRNA depletion using the RZP (Illumina) kit ...
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bioRxiv - Microbiology 2023Quote: ... cDNA library preparation using a TruSeq Stranded Total RNA Library Prep Gold (Illumina) and RNA sequencing to a depth of 10 million 75 bp or 100 bp single end reads using a Nextseq500 or NextSeq2000 sequencing system (Illumina) ...
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bioRxiv - Microbiology 2023Quote: ... a sequencing library was generated from 1 ng of the resulting SAG DNA with the NexteraXT library preparation kit (Illumina, San Diego, CA, USA) and the library was then sequenced on an Illumina MiSeq instrument (2×300 bp) ...
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bioRxiv - Microbiology 2023Quote: Raw data generated from Illumina (n=22) and PacBio (n=2 ...
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bioRxiv - Microbiology 2023Quote: ... we then sought to remove BioProjects containing pyrosequencing data and other sequencing instruments that use processes dissimilar from Illumina sequencing ...
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bioRxiv - Microbiology 2023Quote: Raw sequence data were demultiplexed into sample-specific fastq files using bcl2fastq conversion software from Illumina. Adapter residues were trimmed from both the 5′- and the 3′-end of the reads using the AdapterRemoval v292 ...
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bioRxiv - Microbiology 2023Quote: ... Unique Dual Index Primer pairs (NEBNext Multiplex Oligos for Illumina) were used to index the samples ...
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bioRxiv - Microbiology 2023Quote: ... Libraries were sequenced on the Illumina NextSeq500 platform with paired ends for 2 x 150-base pair reads using a Mid-output cartridge Kit v2.5 (Illumina, 20024905). bcl2fastq software was used to demultiplex and compress bcl files into fastq (gz ...
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bioRxiv - Microbiology 2023Quote: ... Libraries were prepared (Nextera XT DNA Library Preparation kit) and sequenced on an Illumina NextSeq 500 platform (Illumina, San Diego ...
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bioRxiv - Microbiology 2023Quote: ... and any reads that aligned to the phiX genome (if present, almost certainly as a control in Illumina sequencing runs). We also disabled quality-based truncation of reads ...
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bioRxiv - Molecular Biology 2023Quote: ... An input of 500 ng RNA was used to generate libraries (TruSeq RNA Library Prep v2, Illumina). Sequencing was performed on the NextSeq System (Illumina ...
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bioRxiv - Molecular Biology 2023Quote: ... Sequencing was performed on the NextSeq System (Illumina) to produce 132bp single-end reads.
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bioRxiv - Microbiology 2023Quote: ... and RNA sequencing to a depth of 10 million 75 bp or 100 bp single end reads using a Nextseq500 or NextSeq2000 sequencing system (Illumina). Data were analysed using CLC Genomics Workbench version 21.0.5 (Qiagen) ...
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bioRxiv - Molecular Biology 2023Quote: ... Samples were processed for using NextSeq 1000/2000 P2 Reagents (Illumina, San Diego, CA). Samples were sequenced on the Illumina Hi Seq 2000 platform in the UCL Genomics Facility ...
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bioRxiv - Microbiology 2023Quote: Phage DNA was subjected to Illumina sequencing for dsDNA by paired-end library preparation with the Nextera XT DNA Library Preparation Kit (Illumina, San Diego, CA, USA) as recommended by the manufacturer ...
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bioRxiv - Microbiology 2023Quote: ... the DNA sample was prepared using the Illumina DNA prep kit (Illumina, USA) and sequenced on an Illumina MiniSeq device ...
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bioRxiv - Microbiology 2023Quote: ... Australia on one MiSeq V3 system (Illumina) with 2×300bp paired-end reads.
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bioRxiv - Microbiology 2023Quote: ... Fastq files were generated and demultiplexed with bcl2fastq Conversion Software (v2.20; Illumina). The final average sequencing depth was > 80 X for all of the strains ...
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bioRxiv - Microbiology 2023Quote: The paired-end .fastq files generated from Illumina sequencer were trimmed using Trim Galore [85] (v0.6.10 ...
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bioRxiv - Microbiology 2023Quote: ... Sequencing libraries were generated using TruSeq® DNA PCR-Free Sample Preparation Kit (Illumina, USA) following the manufacturer’s instructions ...
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bioRxiv - Neuroscience 2023Quote: ... after which onboard clonal clustering of the patterned flow cell was performed using a NovaSeq 6000 S1 Reagent Kit v1.5 (200 cycle) (Illumina 20028318). A 2x101 cycle sequencing profile with dual index reads was completed using the following sequence profile ...
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bioRxiv - Neuroscience 2023Quote: ... and KAPA Library Quant (Illumina) DNA Standards 1-6 (KAPA Biosystems KK4903) ...
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bioRxiv - Neuroscience 2023Quote: ... FASTQ files were generated from the raw sequencing runs and demultiplexed with the bcl2fastq v2.20 Conversion Software (Illumina). Adaptors were trimmed from the 3’-end of the reads ...
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bioRxiv - Neuroscience 2023Quote: ... Libraries were pooled and then sequenced by NovaSeq 6000 (Illumina). The BDTM Rhapsody docker setup (BD ...
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bioRxiv - Neuroscience 2023Quote: ... Paired-end 150- base pair reads were sequenced with the NovaSeq 6000 platform (Illumina).
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bioRxiv - Neuroscience 2023Quote: ... and 1 ng of genomic DNA was used for constructing sequencing libraries with the NexteraXT Kit (Illumina). MagSi-NGSPREP Plus Beads (Steinbrenner Laborsysteme GmbH ...
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bioRxiv - Neuroscience 2023Quote: Raw sequence data (.bcl files) generated from Illumina was converted into fastq files and de-multiplexed using the 10X Genomics’ cellranger mkfastq command ...
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bioRxiv - Molecular Biology 2023Quote: ... 500 ng of total RNA were used with the TruSeq RNA Sample Preparation v2 Kit (Illumina, San Diego, CA) to construct index-tagged cDNA libraries ...
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bioRxiv - Molecular Biology 2023Quote: ... 4C-seq library of different viewpoints were combined before sequencing on an HiSeq 4000 or NovaSeq 6000 instrument (Illumina) by IntegraGen SA ...
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bioRxiv - Molecular Biology 2023Quote: ... The transposition reaction containing TDE1 Tagment DNA Enzyme (Illumina catalog # 20034198) was incubated at 37°C for 30 minutes ...
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bioRxiv - Molecular Biology 2023Quote: ... 500 ng of total RNA with RIN values of 7.2-10 underwent polyA selection and TruSeq library preparation according to instructions provided by Illumina (TruSeq Stranded mRNA LT Kit ...
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bioRxiv - Molecular Biology 2023Quote: ... The library was sequenced using a TG NextSeq 500/550 High Output Kit v2.5 (75 Cycles) (Illumina, 20024911). Custom primers were spiked in with the Illumina primers ...
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bioRxiv - Molecular Biology 2023Quote: ... 50-nt sequencing was performed utilizing HiSeq 4000 (Illumina).
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bioRxiv - Molecular Biology 2023Quote: ... and sequenced on a HiSeq 4000 (Illumina) with 50-nt single-end reads.
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bioRxiv - Molecular Biology 2023Quote: ... Sequencing libraries were generated utilizing a TruSeq Stranded Total RNA kit (Illumina) and sequenced on a HiSeq 4000 (Illumina ...
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bioRxiv - Molecular Biology 2023Quote: ... Fresh nuclei were treated with Transposition mix and Purification (Illumina #FC121-130), the nuclei were incubated at 37°C in Transposition Reaction Mix (25 µL reaction buffer ...
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bioRxiv - Molecular Biology 2023Quote: ... 11200g for five minutes prior to dividing the lysate for either nuclease foot-printing with RNaseI for generation of the ribosome profiling libraries or total RNA extraction followed by removal of rRNA with RiboZero (plant leaf kit, Illumina) for the corresponding RNA-Seq library.
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bioRxiv - Molecular Biology 2023Quote: ... ChIP DNA was processed using the Illumina ChIP-Seq kit according to manufacturer’s protocols (Illumina, USA) and sequenced to a depth of 11.5 million reads ...
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bioRxiv - Molecular Biology 2023Quote: ... the i5 and i7 indexes (Illumina) are added ...
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bioRxiv - Molecular Biology 2023Quote: ... Paired-end sequencing (150 bp) was performed on a NovaSeq S2 system (Illumina, Inc., USA) at the Competence Centre for Genomic Analysis (CCGA ...
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bioRxiv - Neuroscience 2023Quote: ... The denatured library with a final loading concentration of 400 pM in a pool was loaded on the S4 FC using Illumina SBS kits (Illumina, 20012866) with the following setting on the NovaSeq 6000 ...
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bioRxiv - Neuroscience 2023Quote: ... Libraries were sequenced at low-pass (2x 50bp paired end) targeting 2 million reads on a NextSeq (Illumina) instrument ...
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bioRxiv - Neuroscience 2023Quote: ... libraries were barcoded with AmpliSeq CD Indexes (Illumina, 20031676) and pooled with similar molecular numbers based on measurements made with a Qubit dsDNA High Sensitivity kit (Thermo Fisher Scientific ...
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bioRxiv - Neuroscience 2023Quote: ... and were subsequently sequenced at paired-end 150 bp (DNA libraries) and paired-end 100 bp (RNA derived libraries) on a NovaSeq X Plus (Illumina) platform.
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bioRxiv - Neuroscience 2023Quote: ... and sequenced using Illumina MiSeq technology (Illumina, CA, USA).
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bioRxiv - Neuroscience 2023Quote: Two customized AmpliSeq Custom DNA Panel for Illumina (20020495, Illumina, San Diego, CA, USA) were used for MPAS for ID01 (#203019) ...
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bioRxiv - Neuroscience 2023Quote: ... and a duplicate unrelated control sample was diluted to 5 ng/µl in low TE provided in AmpliSeq Library PLUS (384 Reactions) kit (Illumina, 20019103). AmpliSeq was carried out following the manufacturer’s protocol (document 1000000036408v07) ...
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bioRxiv - Neuroscience 2023Quote: ... The DNA was then suspended in Low TE solution from the AmpliSeq for Illumina kit (Illumina, 20019103) and kept on beads at -20℃ until MPAS analyses.
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bioRxiv - Neuroscience 2023Quote: ... Paired end reads from Illumina sequencing were trimmed of adaptor sequences with Trim Galore and assessed for quality using FastQC ...