Labshake search
Citations for Illumina :
8451 - 8500 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cancer Biology 2023Quote: ... NovaSeq 6000 paired end sequencing was performed using NovaSeq SP Reagent Kit v1.5 (cat# 20028401, Illumina) and NovaSeq S1 Reagent Kit v1.5 (cat# 20028319 ...
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bioRxiv - Cancer Biology 2023Quote: ... and RNA integrity > 9) were selected for library preparation using the Illumina Stranded mRNA Prep Ligation protocol (Illumina, USA), following the manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2023Quote: ... according to the manufacturer’s instructions (Illumina, Document # 1000000040498 v00). The libraries were sequenced with 54 paired-end reads on a NovaSeq-6000 using a Reagent Kit v1.5 (Illumina Inc. ...
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bioRxiv - Cancer Biology 2023Quote: ... Libraries were sequenced by Illumina HiSeq2000 resulting in paired 50nt reads ...
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bioRxiv - Biophysics 2023Quote: ... The forward primer (5’ P5 Illumina adapter) was the same for all samples (GJJ_1J) ...
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bioRxiv - Cancer Biology 2023Quote: ... RNA samples were sequenced using Truseq Stranded Total RNA Library Prep Kit and Illumina HiSeq4000 PE100 (Illumina, San Diego, CA) by the Genome Quebec Innovation Centre ...
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bioRxiv - Biophysics 2023Quote: ... We used MiSeq (Illumina) for sequencing libraries with custom primers ...
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bioRxiv - Bioengineering 2023Quote: ... and sequenced with the MiSeq sequencing system (Illumina) using Miseq Reagent kit V2-150PE.
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bioRxiv - Cancer Biology 2023Quote: ... using a 200 cycle SBS kit (Illumina) with paired-end reads at 101 bp length targeting >60 million reads per sample.
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bioRxiv - Biophysics 2023Quote: ... which was measured by Illumina sequencing ...
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bioRxiv - Biophysics 2023Quote: ... We used HiSeq 2500 or the NovaSeq 6000 platform (Illumina) for 50bp-by-50bp pair-end sequencing ...
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bioRxiv - Cancer Biology 2023Quote: ... Samples were sequenced on a NovaSeq 6000 (Illumina).
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bioRxiv - Cancer Biology 2023Quote: ... and the RNA-seq analysis was performed using Illumina HiSeq2500 system using paired-end sequencing chemistry with 100bp read length (Illumina, San Diego, CA) at the Finnish Functional Genomics Centre ...
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bioRxiv - Biochemistry 2023Quote: ... loaded onto the NextSeq500/550 High Output Kit v2.5 (150 Cycles) chip (Illumina), and sequenced on the NextSeq550 (Illumina) ...
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bioRxiv - Biochemistry 2023Quote: ... then further sequenced by Illumina NovaSeq PE150 platform ...
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bioRxiv - Biochemistry 2023Quote: ... mRNA libraries were prepared using the QuantSeq 3’ mRNA-Seq Library Prep Kit FWD (Illumina). Quality of mRNA libraries was determined using Agilent Tape Station and mRNA was sequenced at 75 bp single read sequencing using NextSeq 500 (Illumina).
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bioRxiv - Biochemistry 2023Quote: ... Quality of mRNA libraries was determined using Agilent Tape Station and mRNA was sequenced at 75 bp single read sequencing using NextSeq 500 (Illumina).
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bioRxiv - Bioengineering 2023Quote: ... The final barcoded RNA-seq libraries were pooled in equimolar concentration and sequenced by a NovaSeq 6000 (Illumina) using 1x100nt reads on one S2 lane for 101 cycles ...
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bioRxiv - Bioengineering 2023Quote: ... The FASTQ files that were generated from the sequencing were demultiplexed using the bcl2fastq v2.20 Conversion Software (Illumina). The quality of the demultiplexed FastQ files was then evaluated using FastQC (version 0.11.9).
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Measuring carbohydrate recognition profile of lectins on live cells using liquid glycan array (LiGA)bioRxiv - Biochemistry 2023Quote: ... The clonal phage was PCR amplified using a protocol described in “PCR Protocol and Illumina sequencing” and analyzed by Illumina sequencing ...
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bioRxiv - Cancer Biology 2023Quote: ... CellTag libraries were sequenced on NextSeq 550 (Illumina) with 26 cycles for read 1 and 58 cycles for read 2.
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bioRxiv - Cancer Biology 2023Quote: ... cDNA libraries were prepared using the TruSeq RNA Library Preparation Kit (Illumina) and checked for quality and quantified using a TapeStation (Agilent Tecnologies) ...
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bioRxiv - Cancer Biology 2023Quote: ... Paired-end sequencing was performed on an Illumina Novaseq 6000 (Illumina) using 100-base reads ...
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bioRxiv - Cancer Biology 2023Quote: ... Raw reads were aligned and duplicate-marked using the DRAGEN Bio-IT Platform (Illumina). Somatic variant calling was performed using VarScan v ...
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bioRxiv - Cancer Biology 2023Quote: ... up to 12 samples were pooled equimolar and paired-end reads 2×150bp sequencing on an Illumina NextSeq 500 instrument using the 300 cycle Mid Output v2.5 Reagent Kit (Illumina, San Diego, CA, USA) according to Illumina guidelines ...
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bioRxiv - Cancer Biology 2023Quote: ... mRNA libraries with 2 % spiked-in PhiX control (Illumina) were sequenced at the 100-bp paired end on a P3 flow cell using an Illumina NextSeq2000 instrument at a sequencing depth of ∼80 K reads per cell ...
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bioRxiv - Cancer Biology 2023Quote: ... to produce cluster counts appropriate for the HiSeq 4000 or NovaSeq 6000 platform (Illumina). 26x98bp sequence data were generated targeting 50K read pairs/cell ...
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bioRxiv - Cancer Biology 2023Quote: RNA-seq libraries were constructed using the TruSeq sample Prep Kit V2 (Illumina) following the manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2023Quote: Poly-A enriched strand-specific libraries were generated with the TruSeq mRNA V2 sample preparation kit (Illumina, cat# RS-122-2001), ribosomal RNA depleted strand-specific RNA libraries with the TruSeq Stranded Total RNA LT sample preparation kit with Ribo-Zero Gold (Illumina ...
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bioRxiv - Cancer Biology 2023Quote: ... and transcriptome capture based libraries with the TruSeq RNA Access Library Prep Kit (Illumina, cat# RS-301-2001). All protocols were performed following the manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2023Quote: We called SVs with three different SV calling methods: Manta (https://github.com/Illumina/manta)(49) ...
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bioRxiv - Bioengineering 2023Quote: ... the amplicon was used to generate a library with Nextera DNA Flex Library Preparation Kit (Illumina) and sequenced in a PE150 run using Illumina Miseq Reagent kit V2 ...
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bioRxiv - Bioengineering 2023Quote: ... mRNA library preparation was realized following manufacturer’s recommendations (Illumina Stranded mRNA Prep from Illumina). Final samples pooled library prep were sequenced on Novaseq 6000 Illumina with SP-200cycles cartridge (2x800Millions of 100 bases reads) ...
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bioRxiv - Bioengineering 2023Quote: 15 Pm libraries were sequenced on a MiSeq (Illumina) using a 150 nucleotide (nt ...
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bioRxiv - Cancer Biology 2023Quote: ... Targeted sequencing was carried out using the MiSeq Nano v2 Kit (Illumina) on the MiSeq desktop sequencer (illumina) ...
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bioRxiv - Cancer Biology 2023Quote: ... Single-end sequencing with 100bp read length was performed using a Novaseq 6000 sequencer (Illumina). Basecalls were converted to fastq files using bcl2fastq (Illumina) ...
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bioRxiv - Bioengineering 2023Quote: ... before applying to the Illumina HiSeq2500 (Illumina, USA) 50-nt single-end sequencing ...
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bioRxiv - Bioengineering 2023Quote: ... mRNA library preparation was realized following manufacturer’s recommendations (Illumina Stranded mRNA Prep from Illumina). Final samples pooled library prep were sequenced on Novaseq 6000 Illumina with SP-200cycles cartridge (2x800Millions of 100 bases reads) ...
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bioRxiv - Bioengineering 2023Quote: ... 10x libraries were pooled and charged with 1% PhiX on one SP lane of the NovaSeq 6000 instrument (Illumina) using the NovaSeq 6000 SP Reagent Kit v1.5 Raw sequencing data of the modules viability study were processed with Cellranger80 ...
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bioRxiv - Bioengineering 2023Quote: The raw data of sequences obtained from Illumina sequencing were initially processed using SeqKit [26] to extract the randomized region of the library ...
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bioRxiv - Bioengineering 2023Quote: ... and sequenced on a MiSeq sequencer using a 300-cycle v2 kit (Illumina). On-target genome editing activities were determined from amplicon sequencing data using CRISPResso2 (ref ...
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bioRxiv - Bioengineering 2023Quote: ... The libraries were then sequenced by a NovaSeq 6000 (Illumina) using 2x150nt reads on an S1 lane ...
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bioRxiv - Bioengineering 2023Quote: ... The preparation of the sequencing library was based on the Nextera XT DNA Library Prep protocol (Illumina), and subsequently sequenced using the Illumina NextSeq High Output paired-end 2×75 parameter ...
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bioRxiv - Bioengineering 2023Quote: ... pair-end single index sequencing parameters were adjusted to 101/6/0/86 (as opposed to 74/6/0/86) to effectively utilize the capabilities of the NovaSeq 200 cycle reagent kit (Illumina). To demultiplex each sample and to generate the matrix of transcript counts in each cell ...
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bioRxiv - Biochemistry 2023Quote: ... Samples were sequenced using NextSeq 500 with Mid output 300 cycles kit (Illumina, USA). Variations were confirmed by capillary sequencing using self-designed primers (Supplementary Table S1 ...
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bioRxiv - Biochemistry 2023Quote: ... demultiplexing and base calling were both performed using bcl2fastq Conversion Software v2.18 (Illumina, Inc.), allowing 0 barcode mismatches with a minimum trimmed read length of 75 ...
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bioRxiv - Evolutionary Biology 2023Quote: ... pendula and on a NovaSeq 6000 (Illumina, San Diego ...
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bioRxiv - Microbiology 2023Quote: ... DNA libraries were prepared using the Nextera XT DNA sample preparation kit (Illumina, San Diego, CA, USA), according to the manufacturer’s specifications ...
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bioRxiv - Molecular Biology 2023Quote: ... Libraries were created and sequenced with NextSeq500 (Illumina) for an estimated 37554 cells with 21879 mean reads per cell ...
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bioRxiv - Evolutionary Biology 2023Quote: ... was performed on two lanes of an Illumina HiSeq3000 using a paired-end read length of 2×150 bp with the Illumina HiSeq3000 sequencing kits (Illumina) at the GeT-PlaGe core facility ...