Labshake search
Citations for Illumina :
8801 - 8850 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Evolutionary Biology 2023Quote: ... The libraries were quality checked and sequenced using the NovaSeq 6000 platform (Illumina) with Novogene dual adapters ...
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bioRxiv - Cell Biology 2023Quote: Libraries were pooled and paired-end sequenced (2X75) on the Illumina NextSeq 500 using the High output V2.5 kit (Illumina Inc., San Diego, CA, USA). Average read count for w1118 and CRTC mutant transcripts was approximately 15.3 million reads per sample ...
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bioRxiv - Evolutionary Biology 2023Quote: Demultiplexing and trimming were performed by RAPiD Genomics LLC using Illumina bcl2fastq2 2.20 (Illumina, 2017). Our UCE datasets were assembled using the package Phyluce 1.7.3 (Faircloth ...
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bioRxiv - Evolutionary Biology 2023Quote: ... and were then sent to the Swedish National Genomics Infrastructure’s SNP & SEQ platform in Uppsala for Illumina HiSeq 2500 sequencing (8 lanes; 126 bp Paired-End sequencing; Illumina, San Diego, CA, USA).
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bioRxiv - Evolutionary Biology 2023Quote: ... Sequencing was performed on a HiSeq 2500 Sequencing system from Illumina, utilizing the paired-end 150 bp technology ...
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bioRxiv - Evolutionary Biology 2023Quote: ... All samples’ transcriptomes were assembled de novo using Trinity v2.11.0 (Haas et al.102) after adapter trimming with Trimmomatic97 (--trimmomatic “ILLUMINACLIP:/home/uni08/applbioinfdevries/DATA_ILLUMINA/novogene_adapter_sequences.fa:2:30:10:2:keepBothReads LEADING:3 TRAILING:3 MINLEN:36”) ...
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bioRxiv - Evolutionary Biology 2023Quote: ... All the 18 TAF individuals were genotyped on the Illumina BovineSNP50 chip assay v2 (Matukumalli et al., 2009) at the LaboGENA platform (Jouy-en-Josas, France) using manufacturer recommendations (Illumina, 2016), in 2014 for the 12 individuals collected in 1992 and in 2010 for the 6 individuals collected in 2006 ...
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bioRxiv - Cancer Biology 2023Quote: ... to produce cluster counts appropriate for the HiSeq 4000 or NovaSeq 6000 platform (Illumina). 26x98bp sequence data were generated targeting 50K read pairs/cell ...
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bioRxiv - Cancer Biology 2023Quote: RNA-seq libraries were constructed using the TruSeq sample Prep Kit V2 (Illumina) following the manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2023Quote: Poly-A enriched strand-specific libraries were generated with the TruSeq mRNA V2 sample preparation kit (Illumina, cat# RS-122-2001), ribosomal RNA depleted strand-specific RNA libraries with the TruSeq Stranded Total RNA LT sample preparation kit with Ribo-Zero Gold (Illumina ...
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bioRxiv - Cancer Biology 2023Quote: ... and transcriptome capture based libraries with the TruSeq RNA Access Library Prep Kit (Illumina, cat# RS-301-2001). All protocols were performed following the manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2023Quote: We called SVs with three different SV calling methods: Manta (https://github.com/Illumina/manta)(49) ...
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bioRxiv - Cancer Biology 2023Quote: ... Libraries were sequenced on an Illumina NextSeq 500 instrument with a High Output v2.5 reagent kit (Illumina # 20024906).
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bioRxiv - Cell Biology 2023Quote: ... The cDNA libraries were constructed by using the TruSeq Stranded mRNA Library Prep Kit (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2023Quote: ... Libraries were pooled and sequenced on NovaSeq 6000 (Illumina) to generate 30 million single-end 50-base pair reads for each sample ...
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bioRxiv - Cancer Biology 2023Quote: ... Libraries underwent 100 nucleotide paired end sequencing on a NovaSeq 6000 (Illumina).
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bioRxiv - Cancer Biology 2023Quote: ... the Truseq Stranded mRNA kit (Illumina) was used with an input of 100 nanograms of total RNA ...
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bioRxiv - Cancer Biology 2023Quote: ... and sequenced in a paired-end manner on NextSeq (Illumina) with 2 x 101 bp read lengths ...
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bioRxiv - Cancer Biology 2023Quote: ... NovaSeq 6000 paired end sequencing was performed using NovaSeq SP Reagent Kit v1.5 (cat# 20028401, Illumina) and NovaSeq S1 Reagent Kit v1.5 (cat# 20028319 ...
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bioRxiv - Cancer Biology 2023Quote: ... and RNA integrity > 9) were selected for library preparation using the Illumina Stranded mRNA Prep Ligation protocol (Illumina, USA), following the manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2023Quote: ... according to the manufacturer’s instructions (Illumina, Document # 1000000040498 v00). The libraries were sequenced with 54 paired-end reads on a NovaSeq-6000 using a Reagent Kit v1.5 (Illumina Inc. ...
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bioRxiv - Cancer Biology 2023Quote: ... Libraries were sequenced by Illumina HiSeq2000 resulting in paired 50nt reads ...
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bioRxiv - Cancer Biology 2023Quote: ... we dispensed 600 nL of tagmentation reaction mix containing Tagmentation DNA buffer (TD) and Amplicon Tagment Mix (ATM) at 2:1 v/v ratio (Nextera kit, Illumina, cat. no. FC-131-1096) into each well and performed tagmentation at 55° C for 5 min followed by hold at 4° C in a PCR thermocycler ...
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bioRxiv - Cancer Biology 2023Quote: ... in single-end mode using the NextSeq 1000/2000 P2 Reagents (100 Cycles) kit (Illumina, cat. no. 20046811). See Supplementary Table 9 for a summary of sequencing statistics.
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bioRxiv - Cancer Biology 2023Quote: ... we performed single-nucleus indexing by dispensing 600 nL of Nextera PCR Master Mix (NPM) and 400 nL of a unique Nextera index pair (Illumina, cat ...
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bioRxiv - Cancer Biology 2023Quote: ... amplicons were pooled and sequenced on the NextSeq 550 platform (Nextseq 500/550 Mid Output Kit v2.5, Illumina, for primers see Supplementary Data Set 1).
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bioRxiv - Cancer Biology 2023Quote: ... Libraries were prepared from TrueSeq Stranded RNA Kit (Illumina) and sequenced on Illumina instruments ...
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bioRxiv - Cancer Biology 2023Quote: ... Libraries were quantified by quantitative PCR (qPCR) (KAPA Biosystems Library Quantification Kit for Illumina platforms) and the sequencing was performed on NextSeq500 (Illumina ...
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bioRxiv - Cancer Biology 2023Quote: ... RNAs with RNA Integrity Number (RIN) values greater than 7.5 were used to generate sequencing libraries using the TruSeq Stranded Total RNA Kit (Illumina) following manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2023Quote: ... Libraries were sequenced using 100 nucleotide paired-end sequencing on a NovaSeq 6000 (Illumina).
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bioRxiv - Cancer Biology 2023Quote: ... Sequencing libraries were generated using the TruSeq Total Stranded RNA Library kit (Illumina) using 250-1000 ng of input RNA ...
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bioRxiv - Cancer Biology 2023Quote: ... The libraries were sequenced with 54 paired-end reads on a NovaSeq-6000 using a Reagent Kit v1.5 (Illumina Inc., San Diego). For CD45+ RNA-seq and the cell line RNA-seq ...
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bioRxiv - Cancer Biology 2023Quote: ... Libraries from each sample were pooled together and sequenced on the Illumina HiSeq 4000 (Illumina). Reads were mapped to the hg19 reference genome using GSNAP40 ...
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bioRxiv - Cancer Biology 2023Quote: ... the libraries were generated using Smart-Seq2 RNA (Illumina) according to the manufacturer’s instructions and paired-end sequenced using the Nextseq-550 High Output Kit v2.5.
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bioRxiv - Cancer Biology 2023Quote: ... The samples were then submitted to the for Miseq and Novaseq deep sequencing (Illumina). Two technical replicates were performed on cells from the same library transformation ...
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bioRxiv - Cell Biology 2023Quote: ... The libraries were sequenced on HiSeq X platform (Illumina) and 150 bp paired-end reads were generated ...
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bioRxiv - Cell Biology 2023Quote: ... Purified total RNA was used to generate mRNA libraries using NEBNext Poly(A) mRNA Magnetic Isolation Module and NEBNext Ultra RNA Library Prep kit for Illumina (Illumina Inc., San Diego, CA, USA). Quality and quantity were assessed using an Agilent DNA1000 series chip assay and Invitrogen Qubit HS Kit (Invitrogen) ...
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bioRxiv - Cell Biology 2023Quote: ... and the library preparations were sequenced on an Illumina Novaseq platform (Illumina, San Diego, USA) to generate 150 bp paired-end reads ...
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bioRxiv - Cell Biology 2023Quote: ... Total RNA was used for library preparation with NEBNext Ultra-low input II Directional RNA Library Prep Kit (Illumina) and sequenced on an Illumina HiSeq with 2×150 bp sequencing configuration (Illumina).
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bioRxiv - Cell Biology 2023Quote: ... and sequenced on an Illumina HiSeq with 2×150 bp sequencing configuration (Illumina).
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bioRxiv - Cell Biology 2023Quote: Library preparation for ATAC-Seq was performed on 1000-2000 cells with Nextera DNA Sample Preparation kit (Illumina), according to previously reported protocol89 ...
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bioRxiv - Cell Biology 2023Quote: ... and sequenced using a 2500 Illumina with 125-bp paired-end reads (Illumina, San Diego, CA, USA). Sequence reads were aligned to GRCh38 and annotated using CompStor NOVOS and CompStor Insight (OmniTier ...
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bioRxiv - Cancer Biology 2023Quote: ... mRNA libraries with 2 % spiked-in PhiX control (Illumina) were sequenced at the 100-bp paired end on a P3 flow cell using an Illumina NextSeq2000 instrument at a sequencing depth of ∼80 K reads per cell ...
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bioRxiv - Cancer Biology 2023Quote: ... Library amplification was performed using 5 μL Nextera XT i7 forward index primer (Illumina) and 5 μL custom i5 index primers (2 μM ...
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bioRxiv - Cell Biology 2023Quote: ... Read count data was converted from BCL to FASTQ filetype using Bcl2fastq conversion software (Illumina).
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bioRxiv - Cell Biology 2023Quote: ... Libraries were sequenced using the NovaSeq 6000 system (Illumina) with 150bp×2 paired-end reads.
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bioRxiv - Cancer Biology 2023Quote: ... CellTag libraries were sequenced on NextSeq 550 (Illumina) with 26 cycles for read 1 and 58 cycles for read 2.
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bioRxiv - Cancer Biology 2023Quote: ... cDNA libraries were prepared using the TruSeq RNA Library Preparation Kit (Illumina) and checked for quality and quantified using a TapeStation (Agilent Tecnologies) ...
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bioRxiv - Cancer Biology 2023Quote: ... Paired-end sequencing was performed on an Illumina Novaseq 6000 (Illumina) using 100-base reads ...
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bioRxiv - Cancer Biology 2023Quote: ... Raw reads were aligned and duplicate-marked using the DRAGEN Bio-IT Platform (Illumina). Somatic variant calling was performed using VarScan v ...