Labshake search
Citations for Illumina :
2001 - 2050 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Biochemistry 2024Quote: ... 800 ng of total RNA was used for preparing poly A libraries with an Illumina Stranded mRNA Prep Ligation kit (Illumina), following the manufacturer’s protocol ...
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bioRxiv - Microbiology 2024Quote: ... on a NovaSeq 6000 System (Illumina), estimating 36.000 reads/cell.
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bioRxiv - Microbiology 2024Quote: ... Sequencing was run using NovaSeq 6000 SP Reagent Kit v1.5 (Illumina, Cat. no. 20028401) on a NovaSeq 6000 System (Illumina) ...
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bioRxiv - Cancer Biology 2024Quote: ... libraries were prepared using TruSeq Stranded mRNA Library Prep Kit (Illumina), and equimolar libraries were multiplexed and sequenced on an Illumina NextSeq 500 (pair end 100 bp reads ...
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bioRxiv - Cancer Biology 2024Quote: ... followed by amplification through PCR with Nextera DNA CD Indexes (Illumina) and NEBNext Ultra II Q5 Master mix (NEB) ...
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bioRxiv - Cell Biology 2024Quote: ... Raw sequence data (.bcl files) generated from Illumina NovaSeq was converted into fastq files and de-multiplexed using Illumina bcl2fastq program version 2.20 ...
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bioRxiv - Cell Biology 2024Quote: ... 500 ng of total RNA with RIN values of 8.3-10 underwent polyA selection and TruSeq library preparation according to instructions provided by Illumina (TruSeq Stranded mRNA LT Kit ...
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bioRxiv - Plant Biology 2024Quote: ... Libraries were sequenced by Illumina NovaSeq to generate 150 bp paired-end reads ...
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bioRxiv - Developmental Biology 2024Quote: ... multiplexed and sequenced on a NovaSeq 6000 (Illumina) in 2× 53-bp paired-end format.
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bioRxiv - Developmental Biology 2024Quote: ... Libraries were prepared using the TruSeq Stranded mRNA library prep kit (Illumina), using TruSeq RNA unique dual index adapters (Illumina) ...
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bioRxiv - Cell Biology 2024Quote: ... and sequenced on a NovaSeq system (Illumina) (SR--65bp ...
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bioRxiv - Developmental Biology 2024Quote: ... RNA-seq libraries were prepared with ScriptSeq V2 RNA-seq library kit (Illumina, SSV21124). Single-end reads were sequenced using a NextSeq500 sequencer ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Illumina sequencing libraries were then prepared for each sample following the Illumina metagenomic amplicon sequencing protocol (Illumina 2013), with 50 ng/uL diluted DNA samples ...
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bioRxiv - Evolutionary Biology 2024Quote: Next Generation Sequencing was performed at either Psomagen (Rockville, MD) or at the Translation Genomics Research Institute (Phoenix, AZ) on patterned flow cells (either an Illumina HiSeqX or NovaSeq) using 2 x 150 base pair paired end reads ...
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bioRxiv - Evolutionary Biology 2024Quote: Library preparation for all 40 samples was done using TruSeq PCR-free kits (Illumina, San Diego, USA) at the Institut Botànic de Barcelona (IBB – CSIC ...
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bioRxiv - Microbiology 2024Quote: ... Purified libraries were sequenced on Illumina MiSeq platform (reagent kits: v2 300-cycles, paired- end mode) at 8 pM loading concentration with 25% PhiX spike-in (Illumina FC-110-3001). Custom sequencing primers were spiked into reagent cartridge (well 12 ...
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bioRxiv - Microbiology 2024Quote: ... Amplicon sequencing was performed using 460 bp paired-end sequencing on the Illumina MiSeq platform (Illumina Inc., San Diego, CA, USA) at FASMAC Co. ...
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bioRxiv - Immunology 2024Quote: ... Nuclei were resuspended in the Nextera transposition reaction mix (25 μL 2x TD Buffer, 2.5 μL Nextera Tn5 transposase (Illumina Cat #FC-121-1030), and 22.5 μL nuclease free H2O ...
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bioRxiv - Genomics 2024Quote: Libraries were constructed using the NEBNext Ultra Directional RNA Library Prep Kit from Illumina and samples were pooled at 10 nM ...
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bioRxiv - Genomics 2024Quote: ... and subsequently paired-end (2x150 bp) sequenced on a NovaSeq 6000 instrument (Illumina, San Diego, CA, USA).
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bioRxiv - Developmental Biology 2024Quote: ... and then 50 nucleotide paired-end DNA sequencing was performed on an Illumina NovaSeq 6000 system using the XP workflow (Illumina). Raw ChIP-seq reads are available at the SRA (SAMN38284736-SAMN38284747).
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bioRxiv - Developmental Biology 2024Quote: ... and then 50 nucleotide paired-end DNA sequencing was completed on an Illumina NovaSeq 6000 system using a S1 flow cell (Illumina). Raw RNA-seq reads are available at the SRA (SAMN38284748-SAMN38284755).
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bioRxiv - Genomics 2024Quote: ... 150 bp paired end reads were generated on the NovaSeq6000 platform (Illumina). For each tissue around 50-60 million reads were generated ...
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bioRxiv - Developmental Biology 2024Quote: ... 500 ng of total RNA was then used to make RNA-seq libraries with an Illumina Stranded mRNA Prep Kit according to the manufacturer’s protocol (Illumina). IDT for Illumina RNA UD Indexes Set A were used ...
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bioRxiv - Physiology 2024Quote: ... and sequenced (75 nucleotides, single end) with a median depth of 25 million reads per sample (NextSeq 550, Illumina, USA).
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bioRxiv - Physiology 2024Quote: ... Preparation of poly-A tail selected RNA libraries (Illumina mRNA Prep kit (Illumina, Inc. CA, USA)) and whole transcriptome sequencing (Novaseq 6000 (Illumina ...
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bioRxiv - Neuroscience 2024Quote: ... Final cDNA libraries were checked for quality by TapeStation and qPCR (Kapa’s library quantification kit for Illumina Sequencing platforms ...
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bioRxiv - Neuroscience 2024Quote: ... Samples were clustered and sequenced using NovaSeq S2 reagents (NovaSeq S2 Run, Illumina) with 80 samples/flow cell and 50 base paired end reads (targeted sequencing depth=45 million reads/sample).
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bioRxiv - Cancer Biology 2024Quote: ... microdissected tumor and germline DNA were subjected to WGS on HiSeq2000 (Illumina). The median sequencing coverage depth of 102x (range ...
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bioRxiv - Genomics 2024Quote: ... We added a FORMAT (GT) and SAMPLE (0/1) column to the VCF and used hap.py (https://github.com/Illumina/hap.py) to compare the v4.2.1 benchmark VCF and BED (https://ftp-trace.ncbi.nlm.nih.gov/ReferenceSamples/giab/release/ChineseTrio/HG005_NA24631_son/NISTv4.2.1/GRCh38/) ...
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bioRxiv - Immunology 2024Quote: ... Equimolar amounts of barcoded libraries pooled together and sequenced on Illumina NovaSeq 6000 Instrument (Illumina, San Diego, CA) using SP flow cells kits (cat # 20040326 ...
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bioRxiv - Genetics 2024Quote: ... Pooled libraries were diluted and processed for either 75-bp single-end or 35-bp paired-end sequencing on an Illumina NextSeq 500 instrument (ID: NB501524) using the NextSeq 500 High Output v2 kit (75 cycles) (Illumina; FC-404-2005) in accordance with the manufacturer’s instructions.
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bioRxiv - Genomics 2024Quote: ... DNA was sheared into smaller fragments and sequenced on the NovaSeq 6000 platform (Illumina, CA, USA) to generate 151 bp paired-end (PE ...
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bioRxiv - Genomics 2024Quote: ... The pooled RNA-seq libraries were subjected to two rounds of 50 bp paired end sequencing on a NextSeq 550 platform using a P2 100-cycle kit (Illumina).
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bioRxiv - Genetics 2024Quote: ... according to the manufacture’s instruction and analyzed by Illumina HiSeq 2500 system (Illumina). For Figure S5 ...
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bioRxiv - Evolutionary Biology 2024Quote: ... The ancestral genome was sequenced via long (Oxford Nanopore Minion) and short (Illumina iSeq100) read technologies ...
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bioRxiv - Plant Biology 2024Quote: ... An RNA-Seq library was constructed using the TruSeq RNA Sample Preparation kit (Illumina), following the manufacturer’s instructions ...
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bioRxiv - Genomics 2024Quote: ... the proportion of the scifi-ATAC-seq library in a lane should be less than 50% or extra spike-in library (e.g., PhiX control from Illumina) should be added to the lane ...
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bioRxiv - Cancer Biology 2024Quote: ... The Illumina NovaSeq (Illumina) was employed to conduct WGS ...
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bioRxiv - Molecular Biology 2024Quote: ... rRNA depletion was performed with a Ribo-Zero Gold rRNA Removal Kit (Human/Mouse/Rat) (Illumina, accompanied by a TruSeq Stranded Total RNA Kit) ...
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bioRxiv - Microbiology 2024Quote: ... and a Kapa Library Quantification Kit (Illumina, Inc., San Diego, CA, USA), and a quality check of the samples was conducted using the 4150 TapeStation system (Agilent Technologies ...
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bioRxiv - Microbiology 2024Quote: ... The barcoded DNA libraries were sequenced using Illumina MiSeq (Illumina, Inc., San Diego, CA, USA) with 2 × 250 bp paired end reads.
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bioRxiv - Immunology 2024Quote: ... Paired-end high-throughput sequencing (125 cycles) was performed using a NovaSeq instrument (Illumina). Sequencing reads were processed by using the 10X Genomics CellRanger pipeline and further analyzed using the Seurat R package ...
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bioRxiv - Cancer Biology 2024Quote: Raw FASTQ data was downloaded from Illumina BaseSpace ...
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bioRxiv - Cancer Biology 2024Quote: ... Ribosomal RNA removal and library preparation was performed using ScriptSeq Complete Gold Kit (Illumina #BEP1206). High-throughput sequencing was performed on an Illumina NextSeq 500 platform (mid-output ...
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bioRxiv - Cancer Biology 2024Quote: ... Pooled libraries were sequenced on a HiSeq 4000 instrument (Illumina) or a NovaSeq 6000 instrument with 2× 150bp paired-end reads for genomic DNA and circular DNA libraries and 2× 75 bp paired-end reads for cDNA libraries.
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bioRxiv - Cancer Biology 2024Quote: ... before deep sequencing on NovaSeq 6000 (Illumina) in the required format to yield at least 20,000 reads per cell for Gene expression and 5,000 reads per cell for TCR libraries.
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bioRxiv - Cancer Biology 2024Quote: ... RNA-Seq libraries were constructed and sequenced following standard protocols (Illumina) at the Genomics and Epigenetics Core Facility of WCM ...
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bioRxiv - Cancer Biology 2024Quote: ... we used Dragen (Illumina) (37 ...
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bioRxiv - Immunology 2024Quote: ... 150×150 cycle paired-end sequencing was performed using a S4 reagent Kit v1.5 (Cat# 20028312; Illumina). 8-11 million reads were generated per sample and were aligned to the GRCm38 mouse reference genome ...