Labshake search
Citations for Illumina :
2101 - 2150 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Neuroscience 2024Quote: ... Libraries were multiplexed using NEBNext Multiplex Oligos for Illumina (dual index primers) and single-ended sequenced (75 bp) on the NextSeq 500 platform (Illumina) in accordance with the manufacturer’s protocol ...
-
bioRxiv - Neuroscience 2024Quote: ... 0.8ul of each normalized sample was mixed with 1.2ul of tagmentation mix containing Tn5 Tagmentation enzyme (20034198, Illumina) and then incubated at 55°C for 12 minutes ...
-
bioRxiv - Neuroscience 2024Quote: ... Sequencing of the resulting libraries was performed in house on an Illumina NextSeq 550 (Illumina) using single-end high-output 75bp kit (Ilumina ...
-
bioRxiv - Neuroscience 2024Quote: ... and sequenced on an Illumina Hiseq platform (Illumina NovaSeq6000).
-
bioRxiv - Neuroscience 2024Quote: ... Base call files for each sample from Illumina were demultiplexed into FASTQ reads ...
-
bioRxiv - Physiology 2024Quote: ... and with a run test using the iSeq100 (Illumina) was sequenced on a NovaSeq6000 (Illumina ...
-
bioRxiv - Neuroscience 2024Quote: ... DNA samples were prepared as libraries for sequencing using the Nextera DNA Flex (Illumina) kit and sequenced on an Illumina NextSeq500.
-
bioRxiv - Neuroscience 2024Quote: ... The library cDNA was subjected to paired-end sequencing with a pair end 125-base pair reading length on an Illumina HiSeq 2500 sequencer (Illumina, San Diego, CA, USA). Gene expression data are included in Supplemental Data 1.
-
bioRxiv - Neuroscience 2024Quote: RNA-seq libraries were sequenced at Canada’s Michael Smith Genome Sciences Centre (BC Cancer Research, Vancouver, BC, Canada) using the Illumina HiseqX (Illumina Inc., San Diego, CA), and 60-120 million paired-end reads (150 bp ...
-
bioRxiv - Plant Biology 2024Quote: ... B (Illumina Inc., San Diego, California, USA) with the following modifications ...
-
bioRxiv - Microbiology 2024Quote: ... Libraries were prepared using the Nextera XT DNA Library Preparation Kit (Illumina, Cambridge, UK) according to the manufacturer’s instructions and quantified using the Qubit 3.0 fluorometer ...
-
bioRxiv - Microbiology 2024Quote: ... and indexed using the Nextera XT Index Kit (Illumina, San Diego, CA, USA) according to the Illumina Metagenomic Sequencing Library Preparation Manual ...
-
bioRxiv - Microbiology 2024Quote: ... Paired-end sequencing (2 × 250 bp) was performed at CINVESTAV Mérida using the MiSeq platform (Illumina, San Diego, CA, USA) with a 500-cycle MiSeq Reagent Nano Kit v ...
-
bioRxiv - Plant Biology 2024Quote: ... the libraries of 192 accessions were pooled and sequenced on the HiSeq 4000 platform (Illumina, San Diego, CA, USA), generating 101-bp paired-end reads ...
-
bioRxiv - Plant Biology 2024Quote: ... library preparation and sequenced on a NextSeq 500 platform (Illumina), using 75 bp single-reads ...
-
bioRxiv - Plant Biology 2024Quote: ... These sRNAs were then used for TruSeq Small RNA (Illumina) library preparation and sequenced on a NextSeq 500 platform (Illumina) ...
-
bioRxiv - Genomics 2024Quote: ... Total RNA-seq libraries were generated from 1 μg of DNase-treated RNA using the TruSeq Stranded total RNA library preparation kit (Illumina, Cat# 15031048) according to the manufacturer’s instructions ...
-
bioRxiv - Genomics 2024Quote: ... The P7 BarSeq primers support demultiplexing by Illumina software via index reads ...
-
bioRxiv - Cell Biology 2024Quote: ... Paired-end (2 × 36 bases) sequencing was performed using a NextSeq500 platform (Illumina, San Diego, CA, USA). The FASTQ files were imported into the CLC Genomics Workbench (version 10.1.1 ...
-
bioRxiv - Cell Biology 2024Quote: ... mRNA libraries were constructed using Truseq kits from Illumina and were sequenced on Illiumina Nextseq P3 (paired-end ...
-
bioRxiv - Cell Biology 2024Quote: ... DNase I treated RNA was prepared for sequencing using rRNA depletion (Illumina RiboZero (Illumina #MRZY1306) or Qiagen FastSelect (Qiagen #334215 ...
-
bioRxiv - Cell Biology 2024Quote: ... and the mRNA-Seq libraries were prepared and sequenced (Illumina, paired-end 150) by the Novogene Corporation (Sacramento ...
-
bioRxiv - Cell Biology 2024Quote: ... DNase I treated RNA was prepared for sequencing using rRNA depletion (Illumina RiboZero (Illumina #MRZY1306) or Qiagen FastSelect (Qiagen #334215 ...
-
bioRxiv - Cell Biology 2024Quote: Sequencing libraries were prepared by the University of Chicago Genomics Facility from DNase I treated RNA using Illumina RiboZero (Illumina #MRZY1306) and Illumina TruSeq library prep kits ...
-
bioRxiv - Cell Biology 2024Quote: ... Then library preparation was conducted (Illumina Nextera DNA Flex). WGS was conducted on Illumina NovaSeq6000 with PE150 targeting 30x coverage per sample ...
-
bioRxiv - Cell Biology 2024Quote: ... Raw sequence data (.bcl files) generated from Illumina NovaSeq was converted into fastq files and de-multiplexed using Illumina bcl2fastq 2.20 software ...
-
bioRxiv - Cell Biology 2024Quote: ... The library preparation and RNA sequencing was performed by Birmingham Genomic centre using Lexogen QuantSeq 3’ mRNA-Seq Library Prep Kit FWD from Illumina. Libraries were quantified using a PicoGreen Quant-iT kit and sized with a D1000 tape ...
-
bioRxiv - Cell Biology 2024Quote: ... and Illumina Stranded mRNA Prep (Illumina #20020595) kits ...
-
bioRxiv - Cell Biology 2024Quote: ... and the Illumina NovaSeq 6000 sequencing system (Illumina Inc., USA).
-
bioRxiv - Genomics 2024Quote: Sequencing data were downloaded from Basespace (Illumina) and pre-barcodes were demultiplexed using FASTX barcode splitter: cat | fastx_barcode_splitter.pl -- bcfile
--bol --prefix Pre-barcodes were removed with FASTX barcode trimmer: fastx_trimmer -f 6 -i -o -z Sequencing and barcode trimming steps were checked for quality using FASTQC [60]: fastqc -o -
bioRxiv - Genomics 2024Quote: ... Pooled PCR products were subjected to multiplex NGS using the NextSeq 500/550v2 Reagent Kit (Illumina). Sequenced reads were separated by barcode ...
-
bioRxiv - Genomics 2024Quote: ... using poly-A selection of mRNA following the protocol outlined by Illumina in their user guide (https://support.illumina.com/sequencing/sequencing_kits/truseq-stranded-mrna.html ...
-
bioRxiv - Genomics 2024Quote: ... The normalized RPKG value (number of reads recruited per kb of genome per Gb of metagenome) and coverage values (alignment of Illumina metagenomic reads in a subset of 40 million reads ...
-
bioRxiv - Genomics 2024Quote: ... using the Global Screen Array GSA 3.0 from Illumina was used to genotype all samples ...
-
bioRxiv - Genomics 2024Quote: ... mRNAseq libraries were built using the ‘TruSeq Stranded mRNA Library Prep’ kit (Illumina) following the protocol provided by the manufacturer ...
-
bioRxiv - Genomics 2024Quote: ... Fastqs generated from Illumina sequencing was input to cellranger (v7.1.0 ...
-
bioRxiv - Genomics 2024Quote: The genome sequencing data (PacBio, Illumina and HiC) of B ...
-
bioRxiv - Genomics 2024Quote: ... Library concentration was estimated by Tapestation (DNA5000 screentape) and qPCR (KAPA Illumina library quantification kit).
-
bioRxiv - Genomics 2024Quote: ... Sequencing libraries were demultiplexed with bcl2fastq (Illumina). The Space Ranger pipeline v2022.0705.1 (10x Genomics ...
-
bioRxiv - Microbiology 2024Quote: ... for 16S rRNA gene and ITS3-GCATCGATGAAGAACGCAGC/ITS4-TCCTCCGCTTATTGATATGC (36) for the ITS2 fragment and sequenced on the Illumina Miseq platform (Illumina, Inc., USA).
-
bioRxiv - Microbiology 2024Quote: ... Ribosomal RNA (rRNA) depletion was performed using the Ribo-Zero rRNA removal kit (bacteria, #MRZB12424, Illumina) with 5 μg of total RNA ...
-
bioRxiv - Microbiology 2024Quote: ... with a paired-end approach (2×300bp) and V3 reagents (Illumina).
-
bioRxiv - Genomics 2024Quote: ... Libraries were sequenced on a NovaSeq 6000 (Illumina), 150bp Paired-End reads ...
-
bioRxiv - Genomics 2024Quote: ... paired end 2X150 kit (Illumina, San Diego, CA). The resulting raw sequence was only trimmed for adaptors ...
-
bioRxiv - Genetics 2024Quote: ... and libraries were sequenced using a HiSeq X10 (Illumina) by Omega Bioservices ...
-
bioRxiv - Microbiology 2024Quote: ... 5 μg of the total RNA was processed by Ribo-Zero rRNA Removal Kit (Bacteria) (Illumina, MRZMB126). Sequencing libraries for RNA-Seq were constructed using NEBNext Ultra II Directional RNA Library Prep Kit for Illumina (NEB ...
-
bioRxiv - Genomics 2024Quote: ... It consisted of 13 trios from the endangered Mexican Wolf (MW, Canis lupus baileyi) population genotyped using the Illumina CanineHD BeadChip array (Illumina, Inc., San Diego, CA). The MW population was reintroduced into the wild in the 1990s ...
-
bioRxiv - Genomics 2024Quote: ... were sequenced as short reads by Illumina. The quality was checked with FastQC v0.11.5 (Andrews et al ...
-
bioRxiv - Genetics 2024Quote: ... Amplicon sequencing libraries were prepared as previously described54,70,71 and sequenced with a 1 x 75 single end read on a NextSeq instrument (Illumina, San Diego CA). Individual gRNA reads were extracted from FASTQ files with PoolQ and analyzed for enrichment using MAGeCK72 ...
-
bioRxiv - Microbiology 2024Quote: ... The sequencing library was prepared using TruSeq Nano DNA Kit (Illumina, San Diego ...