Labshake search
Citations for Illumina :
1851 - 1900 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Immunology 2024Quote: ... TrueSeq stranded mRNA libraries (Illumina) were prepared by the Single Cell Genomics Core at Johns Hopkins University and sequenced on an Illumina NovaSeq platform (1x100bp reads) ...
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bioRxiv - Microbiology 2024Quote: ... or viral isolates or both were sequenced on an Illumina MiSeq with up to 24 samples pooled per sequencing run by use of dual-index library preparation and the Nextera XT DNA Library Preparation kit and 300-cycle MiSeq Reagent v2 kit (Illumina). Sequence reads were trimmed for quality and mapped to respective reference sequence for each influenza A virus gene segment using Geneious Prime software (www.geneious.com ...
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bioRxiv - Microbiology 2024Quote: ... Library yields were assessed using Agilent Tapestation and quantified via qPCR (KAPA Library Quantification Kits for Illumina platforms, KK4828) on a CFX96 Touch Real-Time PCR Detection System (BioRad) ...
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bioRxiv - Microbiology 2024Quote: ... Library pools were sequenced on the NovaSeq 6000 Sequencing System (Illumina) using 2 x 100-bp paired-end reads and 2 x 12-bp index reads with a 300-cycle kit (Illumina ...
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bioRxiv - Microbiology 2024Quote: ... The Illumina Ribo-Zero rRNA Depletion Kit ((Illumina Inc., San Diego, CA, USA) was used to reduce the amount of rRNA-derived sequences.
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bioRxiv - Microbiology 2024Quote: ... Sequencing was performed on the HiSeq4000 instrument (Illumina Inc., San Diego, CA, USA) using HiSeq4000 Reagent Kit sequencing in 50bp Single Read mode ...
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bioRxiv - Microbiology 2024Quote: ... Library pools were sequenced on the NovaSeq 6000 Sequencing System (Illumina) using 28 + 91 -bp paired-end reads and 8-bp Index 1 reads with a 100-cycle kit (Illumina ...
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bioRxiv - Microbiology 2024Quote: ... Isolates collected in 2016 underwent sequencing provided by MicrobesNG (https://microbesng.com) using the Nextera XT library prep kit (Illumina) and the Illumina HiSeq 2500 ...
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bioRxiv - Physiology 2024Quote: ... Libraries were constructed using an Illumina Stranded mRNA Prep (Illumina, USA) following the supplier’s recommendations ...
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bioRxiv - Physiology 2024Quote: ... 250 ng of high-quality total RNA sample (RIN range between 6.6 and 9.68.8) was processed using Stranded mRNA Prep kit (Illumina) according to manufacturer instructions ...
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bioRxiv - Physiology 2024Quote: ... The pooled libraries were denatured and neutralized before loading on a NovaSeq 6000 sequencer at 300 pM final concentration for 100b paired-end sequencing (Illumina, Inc.). Approximately 30-40M reads per library were generated ...
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bioRxiv - Physiology 2024Quote: ... The 16S rRNA V4 gene amplicon sequencing was performed with a V2-500 cycle cartridge on the MiSeq platiorm (Illumina, San Diego, CA, USA). The raw fastq files were processed with the DADA2 pipeline 1.16 (R package ...
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bioRxiv - Physiology 2024Quote: ... The nuclei were pelleted and resuspended in Tn5 enzyme and transposase buffer (Illumina Nextera® DNA library preparation kit ...
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bioRxiv - Physiology 2024Quote: ... Base calling was done by Illumina RTA3 ...
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bioRxiv - Physiology 2024Quote: ... 150 base-pair paired-end read RNA-seq was performed with HiSeq 3000/4000 PE Cluster Kit (PE-410-1001; Illumina) and HiSeq 3000/4000 SBS Kit (300 Cycles ...
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bioRxiv - Physiology 2024Quote: ... and HiSeq 3000/4000 SBS Kit (300 Cycles) (FC-410-1003; Illumina) on HiSeq4000 (Illumina) ...
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bioRxiv - Physiology 2024Quote: ... was used for RNA-seq library preparation with a TruSeq Stranded mRNA Library Prep Kit for NeoPrep (NP-202-1001; Illumina) that allows polyA-oligo(dT)-based purification of mRNA ...
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bioRxiv - Physiology 2024Quote: ... on HiSeq4000 (Illumina), according to the manufacturer’s protocol ...
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bioRxiv - Physiology 2024Quote: ... Pooled libraries at a final concentration of 750pM were sequenced with paired end dual index configuration by Illumina NextSeq 2000 ...
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bioRxiv - Plant Biology 2024Quote: ... and sequencing on the NovaSeq6000 (Illumina).
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bioRxiv - Plant Biology 2024Quote: ... We prepared RNA-Seq (Smart-seq2; Illumina, San Diego, USA) and nanoPARE libraries from 5 ng total RNA according to the nanoPARE library preparation protocol using the nanoPARE library preparation protocol (Schon et al ...
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bioRxiv - Plant Biology 2024Quote: ... nanoPARE and mRNA libraries using an Illumina NextSeq 550 instrument (Illumina, San Diego, USA) at the University of Delaware DNA Sequencing and Genotyping Center.
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bioRxiv - Plant Biology 2024Quote: ... The protocol for library preparation with the Illumina TruSeq Stranded mRNA kit (Illumina Cat no: 20020595, Illumina, USA) was adapted for automation on the Agilent NGS Bravo workstation (Agilent Technologies ...
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bioRxiv - Plant Biology 2024Quote: ... Libraries were sequenced using an Illumina Novaseq6000 sequencer (Illumina, USA) with 150 bp pair-end reading ...
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bioRxiv - Plant Biology 2024Quote: ... Library preparation with the Illumina TruSeq Stranded mRNA kit (Illumina Cat no: 20020595, Illumina, USA) comprised the following ...
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bioRxiv - Plant Biology 2024Quote: ... Library preparation with the Illumina TruSeq Stranded mRNA kit (Illumina Cat no: 20020595, Illumina, USA) comprised the following ...
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bioRxiv - Plant Biology 2024Quote: ... Paired-end sequencing was performed with Illumina NovaSeq 6000 according to the manufacturer’s instructions (Illumina).
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bioRxiv - Plant Biology 2024Quote: ... The prepared library was sequenced using NovaSeq6000 sequencer (Illumina) to generate 150-bp paired-end reads.
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bioRxiv - Physiology 2024Quote: ... single -end sequencing was performed on an Illumina NovaSeq6000 sequencer (Illumina Inc., San Diego, CA) to return a minimum read depth of 30M read pairs per library ...
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bioRxiv - Physiology 2024Quote: ... The third attempt used the linked-reads approach (10x Genomics) prior to sequencing on the Hiseq X platform (Illumina), yielding 389 million 150pb-long paired-end reads ...
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bioRxiv - Physiology 2024Quote: ... were used to construct individual Poly-A enriched cDNA libraries by Novogene (Beijing, China) using the Illumina TruSeq RNA Sample Preparation Kit (Illumina, San Diego, CA, USA) according to the manufacture’s protocol ...
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bioRxiv - Systems Biology 2024Quote: ... the PBS2 region was amplified using primers (Primers 177F and 177R) with homology arms allowing the addition of Illumina Nextera barcodes (Illumina). These allow automated demultiplexing by the Illumina MiSeq instrument ...
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bioRxiv - Physiology 2024Quote: ... Sequencing was performed on the NextSeq 2000 instrument (Illumina) using P3 flow cell and 1x72 bp single end setup ...
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bioRxiv - Physiology 2024Quote: ... where they were genotyped using the Global Diversity Array (Illumina, San Diego, CA, USA) per the manufacturer’s procedures ...
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bioRxiv - Physiology 2024Quote: ... The purified libraries were sequenced on a Novaseq (Illumina) with 28 cycles of read 1 ...
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bioRxiv - Physiology 2024Quote: ... Stranded libraries were prepared from 500 ng total RNA input with poly-A+ selection (TruSeq Stranded mRNA, Illumina). Libraries size and concentration were coneirmed prior to sequencing (TapeStation ...
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bioRxiv - Plant Biology 2024Quote: ... and whole-genome sequencings were performed at BGI (China) using HiSeq technology (Illumina), producing 150-bp paired-end reads ...
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bioRxiv - Plant Biology 2024Quote: ... RNA samples with a RIN value ranging from 6.2 to 8.6 were subjected to sequencing library preparation using TruSeq Stranded mRNA Low Throughput (LT) Sample Preparation Kit (Illumina, San Diego, CA, USA). The prepared library was sequenced using NovaSeq6000 sequencer (Illumina ...
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bioRxiv - Plant Biology 2024Quote: ... Strand-specific total RNA-Sequencing libraries were prepared using the TruSeq Stranded Total RNA with Ribo-Zero Plant kit according to the manufacturer’s specifications (Illumina 20020610). ERCC RNA Spike-In Control Mix (Ambion 4456740 ...
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bioRxiv - Plant Biology 2024Quote: ... 150 bp paired-end reads were obtained on a HiSeq 3000 instrument (Illumina, San Diego, USA). The mean [±sd] number of reads of all F2 samples was 890,202 [356,734] ...
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bioRxiv - Plant Biology 2024Quote: Following the manufacturer’s protocol of short read DNA sequencing from Illumina, the library was prepared ...
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bioRxiv - Plant Biology 2024Quote: Normalized RNA from the qRT experiment was used for mRNA library prep using an in-house custom protocol adapted from Illumina’s TruSeq library prep ...
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bioRxiv - Plant Biology 2024Quote: ... pooled and then sequenced across three flowcells on an Illumina Novaseq (NovaSeq6000 Sequencing System, Illumina) generating ...
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bioRxiv - Plant Biology 2024Quote: ... Paired end read (2×150 bp) sequencing of quality libraries was performed on the NovaSeq 6000 V1.5 platform (Illumina, CA, USA). The libraries’ raw sequence read quality ...
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bioRxiv - Plant Biology 2024Quote: ... The protocol for library preparation with the Illumina TruSeq Stranded mRNA kit (Illumina Cat no: 20020595, Illumina, USA) was adapted for automation on the Agilent NGS Bravo workstation (Agilent Technologies ...
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bioRxiv - Plant Biology 2024Quote: ... The subsequent steps of library preparation were all carried out on the Agilent NGS Bravo workstation in 96-well plates following the instructions for the Illumina TruSeq Stranded mRNA kit (Illumina Cat no: 20020595, Illumina, USA). mRNA was purified from 300-800 ng of total RNA through selective-binding on poly dT-coated beads ...
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bioRxiv - Plant Biology 2024Quote: ... and only samples with Integrity Number of 7 or above were used for library construction by the TruSeq stranded mRNA protocol (Illumina, USA). Libraries were sequenced using an Illumina Novaseq6000 sequencer (Illumina ...
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bioRxiv - Plant Biology 2024Quote: ... The subsequent steps of library preparation were all carried out on the Agilent NGS Bravo workstation in 96-well plates following the instructions for the Illumina TruSeq Stranded mRNA kit (Illumina Cat no: 20020595, Illumina, USA). mRNA was purified from 300-800 ng of total RNA through selective-binding on poly dT-coated beads ...
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bioRxiv - Plant Biology 2024Quote: The purified fragments were sequenced on the MiSeq platform (Illumina, San Diego, CA) to generate 300 bp paired-end reads ...
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bioRxiv - Physiology 2024Quote: ... prepared RNA libraries and performed sequencing (Illumina NovaSeq 6000 system). Pathway analysis using Kyoto Encyclopedia of Genes and Genomes (KEGG ...