Labshake search
Citations for Illumina :
2051 - 2100 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Developmental Biology 2024Quote: ... Raw sequence data (.bcl files) generated from Illumina NovaSeq was converted into FASTQ files and de-multiplexed using Illumina bcl2fastq 2.20 software ...
-
bioRxiv - Developmental Biology 2024Quote: ... and the samples were sequenced using the platform HiSeq 2500 (Illumina) to an average output of 30 million 50bp single end reads per sample at CRG (Center of Genomic Regulation) ...
-
bioRxiv - Developmental Biology 2024Quote: ... at 1/8th reaction volumes (except for Cas13d control and bckdk mRNA KD samples where 1/4th of the reaction volume were used) paired with IDT for Illumina DNA/RNA UD Indexes Set A (Illumina, 20027213), and purified using the Ampure XP bead-based reagent (Beckman Coulter ...
-
bioRxiv - Developmental Biology 2024Quote: ... Paired-end sequencing was carried out either on a NOVA-seq 6000 or HiSeq 1500 sequencer (Illumina).
-
bioRxiv - Evolutionary Biology 2024Quote: Sequencing was performed on a NextSeq2000 instrument with sequencing kit P3-300 (Illumina). The libraries were pooled for sequencing such that for each library we obtained about 30,000,000 reads ...
-
bioRxiv - Developmental Biology 2024Quote: ... Libraries were sequenced using the NextSeq 500/550 Mid Output Kit v2.5 (150 Cycles) (Illumina, 20024904) on the sequencing platform Illumina NextSeq500 ...
-
bioRxiv - Genetics 2024Quote: ... according to the manufacturer’s protocol (Illumina Inc., San Diego, CA). Illumina reads were trimmed using Trimmomatic (version 0.39 ...
-
bioRxiv - Developmental Biology 2024Quote: ... Sequenced reads were aligned to the mouse (mm10) reference genome in the Basespace sequence hub (Illumina), and the aligned reads were used to quantify mRNA expression to determine differentially expressed genes ...
-
bioRxiv - Developmental Biology 2024Quote: ... and incubated with 1µL Tagmentation enzyme (Illumina) at 37 °C for 60 min with shaking 500 rpm ...
-
bioRxiv - Developmental Biology 2024Quote: ... paired-end reading on a NovaSeq instrument (Illumina) at a sequencing depth of 25 million reads per sample ...
-
bioRxiv - Developmental Biology 2024Quote: ... Libraries were sequenced using NovaSeq 6000 (Illumina) at Wellcome Sanger Institute with a minimum depth of 20,000–30,000 read pairs per nucleus.
-
bioRxiv - Developmental Biology 2024Quote: ... Next-generation sequencing libraries were generated using the TruSeq Stranded mRNA Sample Preparation kit (Illumina). The libraries were subjected to single-end sequencing of 81 bp fragments using the Illumina NextSeq 550 platform ...
-
bioRxiv - Developmental Biology 2024Quote: ... The pellet was resuspended in transposition solution containing 5 μL TDE1 (Illumina, 15027865) 25 μL 2x buffer (Illumina ...
-
bioRxiv - Developmental Biology 2024Quote: ... The DNA was amplified by PCR using the Nextera DNA sample preparation and indexing kits (Illumina, FC-121-1030, FC-121-1011) as follows ...
-
bioRxiv - Developmental Biology 2024Quote: ... 25 μL 2x buffer (Illumina, 15027866), 20 μL nuclease-free H2O and incubated 30 m at 37 C ...
-
bioRxiv - Developmental Biology 2024Quote: ... 2,5 μL Nextera cocktail and 7,5 μL of Nextera PCR mastermix (NPM, Illumina, 15027920) in a total volume of 25 μL ...
-
bioRxiv - Genomics 2024Quote: ... combining the long-read capabilities of ONT with the high accuracy and depth of coverage provided by Illumina sequencing.
-
bioRxiv - Evolutionary Biology 2024Quote: The MP libraries were prepared using the Nextera Mate Pair Sample Preparation Kit (Illumina, San Diego, CA). Briefly ...
-
bioRxiv - Developmental Biology 2024Quote: ... complementary DNA libraries were prepared using the TruSeq Stranded mRNA kit (Illumina), and each library was sequenced to an approximate depth of 30 million reads on an Illumina HiSeq 4000 instrument ...
-
bioRxiv - Developmental Biology 2024Quote: ... and the DNA was tagmented with Tn5 (Illumina) and amplified using NEBNext® High-Fidelity 2X PCR Master Mix (NEB) ...
-
bioRxiv - Developmental Biology 2024Quote: ... The resulting DNA libraries were sequenced using the NextSeq550 system (Illumina) at the Integrated Genomics Operation and Center for Epigenetics Research at SKI.
-
bioRxiv - Developmental Biology 2024Quote: ... using the NovaSeq 6000 S4 Reagent Kit (200 Cycles) (Illumina) at the Integrated Genomics Operation at SKI.
-
bioRxiv - Developmental Biology 2024Quote: ... All libraries were sequenced at the DFCI Molecular Biology Core Facility by Illumina NextSeq 500.
-
bioRxiv - Developmental Biology 2024Quote: ... The RNA was ribosome-depleted using the Ribo-Zero kit (Illumina, San Diego, CA). Ribosome-depleted RNA was used to make cDNA libraries using NEBNext Ultra II RNA Library preparation kit for Illumina and NEBNext Multiplex Oligos for Illumina as per manufacturer’s protocol (New England Biolabs ...
-
bioRxiv - Developmental Biology 2024Quote: ... The mRNA-Seq libraries were prepared with 1 μg of total RNA using the TruSeq RNA Library Prep Kit v2 per the manufacturer’s instructions (Illumina). Three independent biological replicates were prepared for each condition and libraries were sequenced on an Illumina HiSeq 4000 instrument (single-end ...
-
bioRxiv - Developmental Biology 2024Quote: ... The resulting sequencing library were performed pair-end sequenced (2 x 150bp) by Illumina NovaSeq instruments at Novogene Bioinformatics Institute ...
-
bioRxiv - Genomics 2024Quote: ... Libraries with 5% PhiX spike-in were sequenced on an Illumina NextSeq 2000 sequencer with P3 200 cycles kits (Illumina cat. #20040560) as paired-end ...
-
bioRxiv - Genomics 2024Quote: ... Datasets were separated into a training set (7 Illumina HumanMethylation450K array studies ...
-
bioRxiv - Genomics 2024Quote: ... followed by a nested PCR reaction (5 cycles for 70 sec at 72◦C) with individual sample-barcoded i5 and i7 Illumina TruSeq primers (New England Biolabs NEBNext Multiplex Oligos for Illumina, cat. # E7600S; Table S1B) 2 ...
-
bioRxiv - Pharmacology and Toxicology 2024Quote: ... pooled and then sequenced on a NovaSeq (Illumina) to provide at least 20M reads for each sample.
-
bioRxiv - Pharmacology and Toxicology 2024Quote: ... where indexed P5 and P7 primers (Illumina) were introduced ...
-
bioRxiv - Plant Biology 2024Quote: ... Reactions were carried out using the Illumina Eco Real-Time PCR System and quantified with the Eco Real-Time PCR System Software EcoStudy (Illumina).
-
bioRxiv - Plant Biology 2024Quote: ... 1.1 (https://sites.google.com/view/lasy-seq/) and sequenced using Nova Seq plus (Illumina, San Diego, CA, USA) with single-end sequencing lengths of 150 bp ...
-
bioRxiv - Plant Biology 2024Quote: ... The library was prepared with the TruSeq Stranded mRNA Library Prep Kit (Illumina, USA), having an average insert size of > 300 bp ...
-
bioRxiv - Plant Biology 2024Quote: ... The PCR products were sequenced using HiSeq2500 (Illumina) to generate 100 bp single-end raw reads ...
-
bioRxiv - Microbiology 2024Quote: ... and pooled in equimolar ratios before pre-sequencing on the Illumina MiniSeq platform (Illumina Inc., San Diego, CA, United States) to inform library re-pooling for optimal equimolarity across samples ...
-
bioRxiv - Microbiology 2024Quote: ... The libraries were subsequently sequenced using MiSeq (Illumina, CA) at CMIT NCU ...
-
bioRxiv - Cell Biology 2024Quote: ... libraries were then sequenced on Flowcell S1 on a NovaSeq 6000 (Illumina).
-
bioRxiv - Synthetic Biology 2024Quote: DNA barcodes were synthesised as an Ultramer DNA Oligo (IDT) consisting of a 106bp variable nucleotide region flanked by Illumina sequencing primer binding sites ...
-
bioRxiv - Cancer Biology 2024Quote: ... Sequencing was performed on the NextSeq 500 (Illumina) using the NextSeq High Output 75 cycle flow cell ...
-
bioRxiv - Physiology 2024Quote: ... Ribosomal RNA was removed with the Ribozero HMR Gold kit (Illumina). The sequencing library was generated following methods described below.
-
bioRxiv - Physiology 2024Quote: ... The fastq read files were generated and demultiplexed with the bcl2fastq v2.20 Conversion Software (Illumina, San Diego, CA). The quality of the demultiplexed fastq files was evaluated with the FastQC software ...
-
bioRxiv - Physiology 2024Quote: ... GRO-Seq samples were run on a NextSeq 500 sequencer from Illumina with a single-end 80 nt model.
-
bioRxiv - Developmental Biology 2024Quote: ... and used for library preparation (NEBNext® Ultra™ II DNA Library Prep Kit for Illumina®). Specifically ...
-
bioRxiv - Cell Biology 2024Quote: ... libraries were sent to the CNRGH (CEA, Evry, France) for sequencing (NextSeq Illumina).
-
bioRxiv - Cell Biology 2024Quote: ... The amplified DNA was then pooled to a 10 nM final concentration followed by a 5% PhiX (Illumina) spike and sequenced in a PE100 run on a HiSeq 4000 sequencer (Illumina ...
-
bioRxiv - Cancer Biology 2024Quote: ... FASTQ files were generated from Illumina’s binary base call raw output with Cell Ranger’s (v2.1.0 ...
-
bioRxiv - Cell Biology 2024Quote: ... The library was sequenced on HiSeq systems (Illumina) using 150 nucleotides (nts ...
-
bioRxiv - Genomics 2024Quote: ... Sequencing was performed on the NextSeq500 and NovaSeq6000 Sequencing Systems (Illumina).
-
bioRxiv - Genomics 2024Quote: ... using NextSeq 500/550 High Output Kit v2.5 (150 Cycles) (Illumina, 20024907) at 200M reads per sample.