Labshake search
Citations for Illumina :
7751 - 7800 of 8781 citations for Parallel Artificial Membrane Permeability Assay PAMPA Kit since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cancer Biology 2024Quote: ... Then the cells were precipitated and kept on ice and subsequently resuspended in 25 μl 2X TD Buffer (Illumina Nextera kit), 2.5 μl Transposase enzyme (Illumina Nextera kit ...
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bioRxiv - Molecular Biology 2024Quote: ... The nuclei were tested for viability using DAPI and 50,000 nuclei were taken for tagmentation reaction as per the manual (Illumina tagmentation kit). The processed samples were subjected to library preparation similar to ChIP-seq methods.
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bioRxiv - Developmental Biology 2024Quote: ... and samples with an RNA Integrity Number (RIN) >8 were used to generate RNA sequencing libraries using the Illumina® Stranded mRNA Prep kit (Illumina).
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bioRxiv - Plant Biology 2024Quote: ... Index-coded samples were clustered on a cBot Cluster Generation System using TruSeq PE Cluster Kit v3-cBot-HS (Illumina, USA) and sequenced on an Illumina Novaseq platform to generate 150bp paired-end reads with a sequencing depth of 10 million reads per sample ...
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bioRxiv - Microbiology 2024Quote: ... Purified 16S rRNA gene sequences were analyzed using a MiSeq Reagent Kit v3 and MiSeq system (Illumina, San Diego, CA, USA). Raw 16S rRNA gene sequences were analyzed using QIIME 2 (ver.2021.4 ...
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bioRxiv - Molecular Biology 2024Quote: ... validated for activity in a corresponding assay and three clones of each cell line were subjected to a genotyping array screening using a Infinium Global Screening Array-24 Kit (Illumina, #20030770) to check for chromosomal rearrangements in iPSCs clones ...
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bioRxiv - Microbiology 2024Quote: ... Metatranscriptomic libraries were prepared using the Illumina Stranded Total RNA library preparation kit with ribosomal depletion using Ribo-Zero Plus (Illumina Inc.). Short read Illumina NovaSeq 6000 sequencing on an SP flow cell of 2X150 bp was performed at the SNP/SEQ facility of the National Genomics Infrastructure in Uppsala ...
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bioRxiv - Synthetic Biology 2024Quote: ... Barcoded RNA-seq libraries were prepared from 1 μg of total RNA using the TruSeq Stranded mRNA Library Prep kit according to the manufacturer’s instructions (Illumina Inc., USA). RNA-seq libraries were sequenced on an Illumina NovaSeq 6000 System according to the manufacturer’s protocol ...
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bioRxiv - Microbiology 2024Quote: ... and strand-specific transcriptome sequencing (RNA-Seq) libraries were constructed using the KAPA RNA HyperPrep kit (Illumina, San Diego, CA, USA). Sequencing was carried out on an Illumina NextSeq 500 instrument at the BPF Next-Gen Sequencing Core Facility at Harvard Medical School ...
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bioRxiv - Microbiology 2024Quote: ... Libraries for all samples were prepared using the Nextera™ DNA Flex Library Prep Kit (Illumina Inc., San Diego, CA, USA), and the subsequent shotgun sequencing was executed on a NovaSeq 6000 system (Illumina Inc. ...
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bioRxiv - Microbiology 2024Quote: ... The genomic libraries were then sequenced on a MiSeq instrument with a MiSeq Reagent Kit v2 (300 cycles; 2 x 150 bp) (Illumina Inc.).
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bioRxiv - Microbiology 2024Quote: ... using 2 x 100-bp paired-end reads and 2 x 12-bp index reads with a 300-cycle kit (Illumina, 20012860).
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bioRxiv - Neuroscience 2024Quote: ... 44M 150bp paired-end reads were sequenced per sample on an Illumina NovaSeq 6000 using the S4 Reagent Kit v1.5 (Illumina, Cat#20028313) by the Genome Technologies Core at The Jackson Laboratory.
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bioRxiv - Genomics 2024Quote: 1 ng of psoralen pull-down DNA (or corresponding Input DNA from the same cells without pull-down) was used to prepare sequencing libraries using a Nextera XT library prep kit (Illumina, Inc) according to the manufacturer protocol ...
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bioRxiv - Cancer Biology 2024Quote: ... Libraries were prepared by the University of Colorado Genomics Shared Resource using Illumina TruSeq Stranded mRNA Library Prep kit (Illumina, #20020595) and sequenced using paired end 50 cycles 2 x 50 on the NovaSEQ 6000 with >30 million reads per sample obtained ...
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bioRxiv - Molecular Biology 2024Quote: 9 µg of total RNA was subjected to ribosomal RNA depletion using the TruSeq Stranded Total RNA library prep Gold kit (Illumina, #20020598). Following purification ...
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bioRxiv - Molecular Biology 2024Quote: ... All samples were submitted to the TruSeq total RNA library construction for microbe with Ribo-zero kit previously to be sequenced using the NovaSeq 6000 (Illumina, CA) platform at Macrogen.
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bioRxiv - Genomics 2024Quote: The gene expression libraries and reconstruction libraries were sequenced on the Illumina Nextseq1000 instrument using P2 100 cycle kit (Illumina, 20046811). For the P1 mouse sample ...
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bioRxiv - Genomics 2024Quote: ... Clustering of the index-coded samples was performed on a cBot Cluster Generation System via the TruSeq PE Cluster Kit v3-cBot-HS (Illumina, USA) according to the manufacturer’s instructions ...
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bioRxiv - Molecular Biology 2024Quote: ... 100-500 ng of total RNA was used as input for poly(A) capture and library preparation using the Illumina Stranded mRNA kit (Illumina 20040532) per manufacturer’s instructions ...
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bioRxiv - Neuroscience 2024Quote: ... 1 µg of total RNA per sample was used for RNA-seq library preparation using the Illumina TruSeq stranded mRNA kit (Illumina, 20020595). Paired-end sequencing was performed on a NovaSeq (Illumina) ...
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bioRxiv - Neuroscience 2024Quote: ... 500 ng total RNA was used to make RNA-seq libraries with the TruSeq Stranded Total RNA Library Prep kit (Illumina 20020599) following rRNA depletion (Illumina 20037135) ...
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bioRxiv - Genomics 2024Quote: PCR-free libraries were generated from 1 microgram genomic DNA using a Covaris R230 to shear the DNA and the TruSeq® DNA PCR-Free HT Sample Preparation Kit (Illumina) for library preparation ...
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bioRxiv - Genomics 2024Quote: ... Sequencing adapters were added to the bead-bound DNA by Tagmentation with the Illumina Tagment DNA Enzyme and Buffer Kit (Illumina, 20034197). After washes ...
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bioRxiv - Genomics 2024Quote: ... 500 ng of purified RNA was used to prepare sequencing libraries with Illumina Stranded Total RNA Prep - Ligation with Ribo-Zero Plus kit (Illumina, 20040525). The quality of the libraries was assessed with a fragment analyzer and the libraries were sequenced on the Illumina sequencing platform with 100 cycles paired-end reads.
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bioRxiv - Genetics 2024Quote: ... 1 µg of total RNA was used with the TruSeq RNA Sample Prep Kit v.2 (Illumina, San Diego, CA, USA). The cDNA libraries were quantified by quantitative Real-Time PCR (qPCR) ...
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bioRxiv - Cell Biology 2024Quote: ... All samples were then pooled in equimolar ratios and sequenced using Illumina NextSeq 500/500 v2 75 cycle kit (Illumina 20024906). Amplifications were carried out with 1×8 cycles for sample index reads and 1×63 cycles for the sgRNA.
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bioRxiv - Evolutionary Biology 2024Quote: ... Genomic sequencing of a multiplexed pool of PCR-free KAPA libraries was performed on a HiSeq4000 or HiSeq 2500 (TruSeq SBS Kit v4, Illumina, Inc) in PE mode (2 x 101 bp ...
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bioRxiv - Cell Biology 2024Quote: ... Multiplexed libraries were equally pooled to 2.5 nM and sequenced by NovaSeq 6000/S1 Reagent Kit version 1.5 (Illumina, 300 cycles; 20028401).
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bioRxiv - Cell Biology 2024Quote: ... and strand-specific RNA-seq libraries were generated using the TruSeq Stranded Total RNA preparation kits (Illumina, San Diego, CA, USA) according to the manufacturer’s instructions before deep sequencing.
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bioRxiv - Cancer Biology 2024Quote: ... Libraries were prepared from 1 ng amplicon DNA by using the Nextera XT library prep kit (Illumina, San Diego, CA, USA) according to the manufacturer’s instructions ...
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bioRxiv - Cell Biology 2024Quote: ... Paired-end 2 x 50nt sequencing of libraries was performed in-house on the Illumina NextSeq2000 using the NextSeq 1000/2000 P2 XLEAP-SBS Reagent Kit (Illumina, 20100987).
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bioRxiv - Cell Biology 2024Quote: ... Paired-end 2 x 150nt sequencing of libraries was performed in-house on the Illumina NextSeq2000 using the NextSeq 2000 P3 Reagent Kit (Illumina, 20040561).
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bioRxiv - Cell Biology 2024Quote: 100 ng of total RNA obtained from either total cells or separated compartments was used for library preparation with the Truseq stranded total library prep kit (Illumina 20020596) or Truseq stranded mRNA library prep kit (Illumina 20020595 ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Genomic DNA libraries were constructed from 200 ng of each DNA extract using NexteraTM DNA Flex library prep kits and NexteraTM DNA CD Indexes (Illumina, Singapore) for 130 DNA samples ...
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bioRxiv - Cancer Biology 2021Quote: ... Either 250ng or 75ng of gDNA were used for library preparation with either a Truseq Custom Amplicon Kit (Illumina, San Diego, USA) or an Ampliseq for Illumina Custom Panel (Illumina ...
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bioRxiv - Cancer Biology 2021Quote: ... cells were lysed for 5 min followed by transposase reaction and library amplification using Nextera DNA Library Prep Kit (Illumina, California, USA). Libraries were then size-selected (240-360 bp ...
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bioRxiv - Molecular Biology 2021Quote: ... 1 ug of treated RNA was then input into the Illumina TruSeq Small RNA Library Preparation Kit (Illumina; Cat #: RS-200-0012) with 11 cycles of PCR amplification ...
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bioRxiv - Evolutionary Biology 2021Quote: Libraries for each individual starling were constructed using a TruSeq DNA PCR-free High Throughput Library Prep Kit (Illumina, San Diego, CA). All individuals passed the initial quality check with FASTQC (Babraham Bioinformatics ...
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bioRxiv - Microbiology 2021Quote: ... The library was generated using the transposon-based Nextera™ XT Sample Preparation Kit using 15 cycles (Illumina, San Diego, CA, USA) and the concentration of DNA libraries was measured by Quant-iT™ DNA HS Assay Kit ...
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bioRxiv - Evolutionary Biology 2020Quote: ... The barcoded stranded mRNA-sequencing libraries were prepared using the Illumina TruSeq mRNA v2 sample preparation kit (Illumina, San Diego, CA, USA) with poly-A mRNA enrichment ...
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bioRxiv - Developmental Biology 2020Quote: Libraries were sequenced on an Illumina HiSeq X™ using HiSeq X™ Five Reagent Kit v2(Illumina, Cat# FC-502-2021).
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bioRxiv - Evolutionary Biology 2021Quote: ... We then prepared tagmentation-based whole genome libraries for low coverage sequencing by enzymatically shearing DNA diluted to approximately 2.5 ng/ul using the Illumina Tagment DNA TDE1 Enzyme and Buffer Kits (Illumina, San Diego, CA) at 55°C for 5 minutes ...
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bioRxiv - Genomics 2020Quote: ... sequencing libraries of the two deeply sequenced samples were constructed with 1.8-2 μg sample DNA and the TruSeq DNA PCR-Free kit (Illumina, San Diego, CA). The remaining 74 paired-end short insert (350 nt ...
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Host transcriptomic profiling of COVID-19 patients with mild, moderate, and severe clinical outcomesbioRxiv - Genomics 2020Quote: ... as previously described.12,13,14 Libraries were then sequenced using the NovaSeq SP Reagent kit (2 × 150 cycles) from Illumina (San Diego, CA, USA) to generate a minimum of 15M reads per sample (Supplementary Table 1).
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bioRxiv - Genomics 2020Quote: ... Complementary RNA (cRNA) was synthesized and biotinylated using the Illumina™ TotalPrep™-96 RNA Amplification Kit (Illumina Inc., San Diego, CA). cRNA samples were then hybridized to HumanHT-12 v3 Expression BeadChips (Illumina ...
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bioRxiv - Synthetic Biology 2022Quote: ... Indexes were added to the amplified DNA using i5 and i7 primers from the Nextera XT Index Kit (Illumina # FC-131-1002). Indexed samples were loaded into a MiSeq Reagent Kit v3 600-cycle (Illumina # MS-102-3003 ...
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bioRxiv - Bioengineering 2022Quote: ... Illumina sequencing of the spirulina genome was performed on a MiSeq instrument using a MiSeq Reagent Kit v2 (Illumina, MS-102-2003).
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bioRxiv - Genomics 2022Quote: ... USA) from which ~500bp insert indexed sequencing libraries were generated using the Illumina TruSeq v2 Library Construction Kit (Illumina, San Diego, CA). Single-end 100-bp reads were generated from D ...
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bioRxiv - Neuroscience 2021Quote: ... Hippocampus RNA-seq libraries were prepared in accordance with New England Biolab protocols (NEBNext_ Ultra II RNA library Prep kit for Illumina, NEB, USA). Briefly ...