Labshake search
Citations for Illumina :
7651 - 7700 of 8781 citations for Parallel Artificial Membrane Permeability Assay PAMPA Kit since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genetics 2023Quote: Sequencing was performed on a MiSeq instrument using a MiSeq Reagent Kit v3 (150-cycle; Illumina; cat. no. MS-102-3001) following standard procedures ...
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bioRxiv - Plant Biology 2023Quote: ... The libraries were prepared using the TruSeq DNA PCR-Free kit and sequenced on the HiSeq RR-PE100 system (Illumina, USA). This resulted in approximately 188 million reads in total or about 94 million reads per pooled sample ...
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bioRxiv - Microbiology 2023Quote: ... Fragmented and indexed samples were run on the sequencer using the MiSeq Reagent Kit v2 (Illumina; 250□bp paired-end reads) following Illumina’s recommended denaturation and loading procedures.
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bioRxiv - Cancer Biology 2023Quote: ... Target-enriched RNA-seq libraries were analyzed on an Illumina NextSeq 500 sequencer using a NextSeq500/550 High Output v2 Kit (75 cycles) according to the standard manufacturer’s protocol (Illumina, CA, USA).
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bioRxiv - Plant Biology 2023Quote: ... About 10 μg total RNA was used for mRNA purification followed by cDNA library preparation with the TruSeq Stranded mRNA kit (Illumina, USA). The prepared cDNA libraries were amplified by PCR and sequenced by using Illumina Hiseq 2500 ...
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bioRxiv - Biophysics 2023Quote: ... We performed 8 additional cycles of PCR with Nextera 24-Index kit for indexing before sample pooling (Illumina, FC-121-1011), for which we used 7.5 μl of the elute as template ...
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bioRxiv - Biochemistry 2022Quote: 1 µL of purified DNA was directly used as input into a miniaturized version of the Nextera-XT Library Preparation Kit (Illumina Inc.). All reactions were scaled to one-fourth their original volumes ...
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bioRxiv - Molecular Biology 2023Quote: ... Sequencing was performed on the Illumina HiSeq 2500 single end 100bp using the TruSeq SBS Kit HS2500 (Illumina, Inc, California, USA). Reads were aligned to the reference genome (hg38 ...
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A scalable, GMP-compatible, autologous organotypic cell therapy for Dystrophic Epidermolysis BullosabioRxiv - Bioengineering 2023Quote: ... Tagmentation-based sequencing libraries were prepared from 500 ng gDNA in duplicate with the Illumina DNA prep (M) kit (Illumina #20018704) using IDT® for Illumina® DNA/RNA UD Indexes Set B ...
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bioRxiv - Genomics 2022Quote: ... and sequenced on a NextSeq 500 instrument (NextSeq 500/550 High Output Kit v2.5 (Illumina, 20024907, PE 2 x 75 cycles)) ...
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bioRxiv - Microbiology 2022Quote: ... the purified amplicons were sequenced using the MiSeq reagent kit v2 (13 cycles) on the MiSeq platform (Illumina, Inc., CA, USA).
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bioRxiv - Cell Biology 2022Quote: ... 150 ng of total RNA was used to make RNA sequencing libraries using the TruSeq Stranded mRNA Prep Kit (Illumina 20020595). Libraries were run on a 50-cycle NovaSeq (SP flowcell ...
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bioRxiv - Cell Biology 2022Quote: For the RNA sequencing of samples from FACS sorted mECs incubated under angiogenic conditions for 16h the following protocol was used: The TruSeq stranded RNA kit (Illumina Inc.) was used according to the manufacturer’s protocol ...
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bioRxiv - Cancer Biology 2023Quote: ... RNAseq libraries were prepared from total RNA with the QuantSeq 3′ mRNA-Seq Library Prep Kit FWD for Illumina (Lexogen, 015.24) in combination with the UMI Second Strand Synthesis Module for QuantSeq FWD (Illumina, Read 1) (Lexogen ...
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bioRxiv - Cancer Biology 2023Quote: ... The libraries were prepared according to the manufacturer’s protocols and sequenced using the NovaSeq 6000 Paired-End S1 kit (Illumina, California, USA) by the NGS Core Facility of the German Cancer Research Center (DKFZ).
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bioRxiv - Developmental Biology 2022Quote: ... Single read sequencing with a read length of 72 bp was performed on NextSeq ® 2000 System using the corresponding NextSeq2000 P3 Reagent Kit (Illumina). Total RNA integrity and quality of the library were assessed using a TapeStation4200 (Agilent) ...
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bioRxiv - Evolutionary Biology 2022Quote: ... Small RNA libraries were then prepared following the standard Illumina protocol with TruSeq small RNA kit (Illumina Catalog No. RS-200). The ribo-seq libraries were sequenced at the Vincent J ...
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bioRxiv - Genetics 2023Quote: Sequencing was performed on a MiSeq instrument using a MiSeq Reagent Kit v3 (150-cycle; Illumina; cat. no. MS-102-3001) following standard procedures ...
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bioRxiv - Genetics 2023Quote: ... Paired-end read sequencing was done in a NextSeq 500/550 platform using either the 150-cycle Medium Output Kit (Illumina # 20024909), 75 cycles per read ...
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bioRxiv - Genomics 2023Quote: ... Samples were then loaded onto the Illumina NextSeq500 Instrument using a Mid-output 300 cycle kit (Illumina Catalogue FC-404-2003) or the MinION flow cell ONT instrument (R9.4.1) ...
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bioRxiv - Cancer Biology 2022Quote: Poly-A enriched strand-specific libraries were generated with the TruSeq mRNA V2 sample preparation kit (Illumina, cat# RS-122-2001), ribosomal RNA depleted strand-specific RNA libraries with the TruSeq Stranded Total RNA LT sample preparation kit with Ribo-Zero Gold (Illumina ...
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bioRxiv - Microbiology 2023Quote: The Acinetobacter isolates libraries were prepared with the Nextera XT DNA Library preparation kit from Illumina (Cat. No.: FC-131-1096) and were sequenced with the NextSeq 550 instrument (Illumina ...
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bioRxiv - Genomics 2023Quote: ... and we constructed the directional RNA-seq libraries using Illumina’s TruSeq Small RNA Sample Prep Kit (Illumina, San Diego, CA, USA), so that multiplex sequencing can be achieved by using the barcoded PCR primers.
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bioRxiv - Microbiology 2023Quote: ... Denmark) on an Illumina NextSeq 500 with a v2.5 high-throughput 300 cycles kit (both Illumina, San Diego, CA, United States).
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bioRxiv - Evolutionary Biology 2023Quote: ... 150-bp paired-end RNA-seq libraries were prepared with the TruSeq Stranded mRNA Kit (Illumina, Inc., San Diego, CA, USA) and sequenced on a NovaSeq 6000 instrument to a depth of 100 M reads per library by Psomagen ...
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bioRxiv - Genetics 2022Quote: ... Library preparation of the LR-PCR products was performed using a Nextera XT DNA Library Preparation Kit (Illumina Inc., CA, USA). For 96 Sudanese samples ...
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bioRxiv - Systems Biology 2023Quote: ... We diluted and made an equimolar pool of all libraries for sequencing on a NextSeq 500 using a 150 cycle mid output kit (Illumina, 20024904) using 151 cycles for read one to capture the clone DNA barcodes and eight cycles for each index.
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bioRxiv - Genomics 2023Quote: We sequenced scRNA-seq and spatial barcode libraries on an Illumina Nextseq 1000 instrument using a p2 100 cycle kit (Illumina, 20046811). For some libraries ...
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bioRxiv - Developmental Biology 2023Quote: ... Total RNA of 1μg was used to generate libraries using of Illumina stranded total RNA prep with Ribo-Zero Plus library preparation kit (Illumina, 20040529). The Qubit dsDNA HS (High Sensitivity ...
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bioRxiv - Cancer Biology 2023Quote: ... Samples were additionally quantified by RiboGreen and assessed for quality control using an Agilent BioAnalyzer in the Integrated Genomics Core at MSKCC and 513 ng to 1.0 µg of total RNA with an RNA integrity number ranging 1.3–8.3 underwent ribosomal depletion and library preparation using the TruSeq Stranded Total RNA LT kit (Illumina, RS-122-1202) according to instructions provided by the manufacturer with eight cycles of PCR ...
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bioRxiv - Cancer Biology 2023Quote: ... 150pg of cDNA was used to generate Illumina compatible sequencing libraries with the NexteraXT library preparation kit (Illumina, San Diego, CA) per manufacturer’s protocols ...
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bioRxiv - Microbiology 2023Quote: ... using a modified quarter-volume protocol before sequencing on the MiSeq platform with a MiSeq Reagent Kit v3 (500-cycle; Illumina, CA) to generate 2×250 bp paired-end reads ...
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bioRxiv - Microbiology 2023Quote: ... The extracted DNA was used for library preparation using the Nextera XT DNA library preparation kit (Illumina, San Diego, CA, USA). Libraries were sequenced using Illumina HiSeq X Ten (2 × 150-bp).
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bioRxiv - Plant Biology 2023Quote: ... and 1.5 ug RNA was used for library preparation at the High-throughput Sequencing Facility at UNC Chapel Hill using the Stranded mRNA-Seq kit (Kapa Biosystems. The NovaSeq 6000 sequencer (Illumina) generated 50bp paired-end reads with a read depth of 23-35 million reads per biological replicate ...
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bioRxiv - Genetics 2023Quote: ... was used to isolate total RNA and approximately 1 ug of RNA was processed with the TruSeq Stranded mRNA Library Prep Kit (Illumina 20020594) to prepare libraries for paired-end sequencing on Nova-seq 6000 ...
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bioRxiv - Genomics 2023Quote: ... The sequencing-ready library was cleaned up with SPRIselect and quantified by qPCR (KAPA Biosystems Library Quantification Kit for Illumina platforms). 200 pM of sequencing libraries were loaded on an Illumina HiSeq instruments (see Single-cell RNA sequencing analysis section ...
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bioRxiv - Cancer Biology 2023Quote: ... paired-end sequencing was performed on an Illumina NovaSeq6000 sequencer using an S2 sequencing kit (Illumina Inc., San Diego, CA, USA) to an average depth of 45M reads per sample ...
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bioRxiv - Cancer Biology 2023Quote: ... Array-based tissue methylation profiling was performed by following the instructions of the Infinium MethylationEPIC BeadChIP Kit (Illumina, WG-317-1002). Briefly ...
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bioRxiv - Molecular Biology 2023Quote: ... 1 μg of total RNA was subjected to poly(A) enrichment and library preparation using the TruSeq® Stranded mRNA Library Prep Kit (Illumina) following the manufacturer’s instructions ...
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bioRxiv - Genomics 2023Quote: The 200 µL of the lysates described above were treated with RNase I (50 units nuclease per 40 µg of RNA; the nuclease was included in TruSeq Mammalian Ribo Profile Kit, Illumina, RPHMR12126) for 1 hour at room temperature with gentle mixing ...
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bioRxiv - Plant Biology 2023Quote: ... 1 µg DNA from all the samples was used to prepare sequencing libraries with TruSeq Nano DNA HT Sample Preparation Kit (Illumina, USA) and qualified libraries were sequenced on the Illumina HiSeq2500 platform to obtain 2x150 bp reads at approximately 40x coverage ...
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bioRxiv - Genomics 2023Quote: ... The pool was sequenced on an entire lane of a NextSeq 500 HO flow cell to generate paired-end 151 bp reads using the NextSeq 500 High Output Kit v2.5 (300 cycles) (Illumina, Cat # 20024908).
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bioRxiv - Genetics 2023Quote: ... Genomic DNA libraries were prepared either with the Westburg NGS DNA Library prep kit, or with the KAPA DNA HyperPrep (Kapa Biosciences, KK8504) and adapters IDT for Illumina TruSeq DNA UD Indexes (Illumina 20022370), according to the manufacturer recommendations ...
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bioRxiv - Genomics 2023Quote: Three samples of 50 ng each of genomic DNA were sheared and processed using the Nextera DNA Library Prep Kit (Illumina, USA) according to the manufacturer’s instructions ...
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bioRxiv - Genomics 2023Quote: ... Ribosomal RNA was depleted from 500 ng total RNA using the Illumina Ribo-Zero Plus rRNA Depletion Kit (Illumina, Cat. # 20037135). RNA was converted to cDNA ...
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bioRxiv - Immunology 2023Quote: ... Illumina sequencing of the 8 samples in 100 million reads/sample was done with the NextSeq 500 High Output Kit v2 (300 cycles) sequencer (Illumina Inc) generating paired end reads of approximately 2 × 75 bp in length ...
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bioRxiv - Neuroscience 2023Quote: ... The denatured library with a final loading concentration of 400 pM in a pool was loaded on the S4 FC using Illumina SBS kits (Illumina, 20012866) with the following setting on the NovaSeq 6000 ...
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bioRxiv - Neuroscience 2023Quote: ... and a duplicate unrelated control sample was diluted to 5 ng/µl in low TE provided in AmpliSeq Library PLUS (384 Reactions) kit (Illumina, 20019103). AmpliSeq was carried out following the manufacturer’s protocol (document 1000000036408v07) ...
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bioRxiv - Physiology 2023Quote: The cDNA library was then prepared from 500 ng of total RNA using the TruSeq stranded mRNA library kit (Illumina, USA) according to the manufactureŕs protocol ...
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bioRxiv - Cancer Biology 2023Quote: ... paired-end sequencing was performed on an Illumina NovaSeq 6000 sequencer using 100 cycle sequencing kit (Illumina Inc., San Diego, CA) to a minimum read depth of 40 M reads/library ...