Labshake search
Citations for Illumina :
7701 - 7750 of 8781 citations for Parallel Artificial Membrane Permeability Assay PAMPA Kit since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2023Quote: ... RNA libraries were prepared from 500 ng RNA samples using the TruSeq Stranded mRNA Kit (Illumina Inc., San Diego, CA, US) following the manufacturer’s instructions ...
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bioRxiv - Genetics 2023Quote: ... cDNA libraries were prepared with the TruSeq stranded mRNA library prep Kit (cat# RS-122-2101, Illumina, San Diego, CA, USA). The resulting libraries were sequenced on a HiSeq 4000 (Genomics & Cell Characterization Core Facility ...
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bioRxiv - Immunology 2023Quote: ... Sequencing was performed on an Illumina NextSeq 500 sequencer to generate 2 × 76 paired end reads using NextSeq 500/550 High Output kit v2.5 (150 cycles) following the manufacturer’s protocol (Illumina, Cat. No. 20024912). The quality of cDNAs and Illumina libraries were assessed on a TapeStation 2200 with the high sensitivity D5000 ScreenTape (Agilent Cat ...
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bioRxiv - Genomics 2023Quote: ... Nuclei isolation and transposition followed the OMNI ATAC-seq protocol as previously reported11 using the Illumina Tagment DNA TDE1 Enzyme & Buffer Kit (Illumina #20034197). Libraries were generated using Illumina Nextera CD Indexes (Illumina #20018708 ...
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bioRxiv - Microbiology 2023Quote: ... dual indices and adaptors were linked to the amplicon using the Nextera XT Index Kit® (Illumina, San Diego, CA, USA) following the thermal cycler program ...
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bioRxiv - Genomics 2023Quote: ... and pair end sequenced on the Illumina Miseq using the MiSeq Reagent Nano Kit v2 (300-cycles) (Illumina, MS-102-2002).
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bioRxiv - Microbiology 2023Quote: ... DNA libraries of each sample were prepared for whole genome sequencing (WGS) using a Nextera XT kit (Illumina, San Diego, CA). Briefly ...
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bioRxiv - Genomics 2023Quote: ... A total of 4 µg of RNA per sample was subjected to rRNA depletion using the RiboZero Plant Leaf kit (Illumina, MRZPL1224) following the manufacturer’s recommendations ...
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bioRxiv - Genomics 2023Quote: ... Pooled libraries were loaded at a final concentration of 750 pM and sequenced on an Illumina NextSeq 2000 using a P3 2x150 kit (Illumina Inc). De-multiplexing ...
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bioRxiv - Developmental Biology 2023Quote: ... Libraries were prepared from total RNA with the TruSeq Stranded Total RNA Library Prep Kit according to the manufacturer’s instructions (Illumina, PN 20020599). Libraries were analyzed for insert size distribution on a 2100 BioAnalyzer High Sensitivity kit (Agilent Technologies, ...
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Activation of glucocorticoid receptor signaling inhibits KSHV-induced inflammation and tumorigenesisbioRxiv - Cancer Biology 2023Quote: ... mRNA was isolated using Oligo(dT) beads and library was prepared following the Illumina TruSeq Stranded mRNA Library Prep Kit (Illumina, 20020594). Sequencing was carried out using Illumina HiSeq 3000 with the 50-bp single-read sequencing module ...
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bioRxiv - Cancer Biology 2023Quote: DNA libraries were produced from 50 ng of genomic DNA using the Nextera Rapid Capture Exome kit (Illumina, San Diego, USA) as per manufacturer’s instructions ...
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bioRxiv - Developmental Biology 2023Quote: ... Total RNA libraries were produced from 600 ng of RNA using the TruSeq Stranded total RNA library preparation kit (Illumina, 20020596) according to the manufacturer’s protocol ...
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bioRxiv - Cancer Biology 2023Quote: Poly-A enriched strand-specific libraries were generated with the TruSeq mRNA V2 sample preparation kit (Illumina, cat# RS-122-2001), ribosomal RNA depleted strand-specific RNA libraries with the TruSeq Stranded Total RNA LT sample preparation kit with Ribo-Zero Gold (Illumina ...
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bioRxiv - Cell Biology 2023Quote: ... 500 ng RNA was used as input for the TruSeq Stranded Total RNA sequencing kit with RiboZero rRNA depletion (Illumina, 20020598). Samples were sequenced at the Harvard University Bauer Core on a NovaSeq 6000 using the S1 300 cycle kit ...
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bioRxiv - Cell Biology 2023Quote: ... DNAse-treated RNA extracts were processed for library preparation using the Truseq Stranded mRNA sample preparation kit (Illumina, San Diego, California) according to the manufacturer’s instructions ...
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bioRxiv - Cell Biology 2023Quote: ... The RNA was subjected to prepare libraries using Illumina TruSeq RNA and DNA Sample Prep Kits (Illumina, San Diego, CA, USA). Library qualities were confirmed using Qubit 2.0 fluorometer (Life Technologies ...
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bioRxiv - Microbiology 2023Quote: ... Whole transcriptome sequencing (total RNAseq) data was generated using the Illumina TruSeq Stranded Total RNA with Ribo-Zero Globin kit (20020612, Illumina Inc.) cDNA was prepared following rRNA and Globin mRNA depletion ...
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bioRxiv - Plant Biology 2023Quote: ... Paired-end sequencing (2 × 75 bp) was performed with a NextSeq 550 System High OutPut kit (Illumina, San Diego, CA, USA). Raw reads are available at GSE227386.
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bioRxiv - Developmental Biology 2024Quote: ... and samples with an RNA Integrity Number (RIN) >8 were used to generate RNA sequencing libraries using the Illumina® Stranded mRNA Prep kit (Illumina).
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bioRxiv - Molecular Biology 2024Quote: ... validated for activity in a corresponding assay and three clones of each cell line were subjected to a genotyping array screening using a Infinium Global Screening Array-24 Kit (Illumina, #20030770) to check for chromosomal rearrangements in iPSCs clones ...
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bioRxiv - Plant Biology 2024Quote: ... Index-coded samples were clustered on a cBot Cluster Generation System using TruSeq PE Cluster Kit v3-cBot-HS (Illumina, USA) and sequenced on an Illumina Novaseq platform to generate 150bp paired-end reads with a sequencing depth of 10 million reads per sample ...
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bioRxiv - Cancer Biology 2024Quote: ... RNA concentration was quantified using a Nanodrop and 1 µg of RNA per sample was submitted to the Abigail Wexner Research Institute Genomic Services Laboratory for library preparation using the TruSeq Stranded mRNA Kit (Illumina 20020594), library quality control ...
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bioRxiv - Microbiology 2024Quote: ... Purified 16S rRNA gene sequences were analyzed using a MiSeq Reagent Kit v3 and MiSeq system (Illumina, San Diego, CA, USA). Raw 16S rRNA gene sequences were analyzed using QIIME 2 (ver.2021.4 ...
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bioRxiv - Microbiology 2024Quote: ... The genomic libraries were then sequenced on a MiSeq instrument with a MiSeq Reagent Kit v2 (300 cycles; 2 x 150 bp) (Illumina Inc.).
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bioRxiv - Microbiology 2024Quote: ... using 2 x 100-bp paired-end reads and 2 x 12-bp index reads with a 300-cycle kit (Illumina, 20012860).
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bioRxiv - Microbiology 2024Quote: ... Metatranscriptomic libraries were prepared using the Illumina Stranded Total RNA library preparation kit with ribosomal depletion using Ribo-Zero Plus (Illumina Inc.). Short read Illumina NovaSeq 6000 sequencing on an SP flow cell of 2X150 bp was performed at the SNP/SEQ facility of the National Genomics Infrastructure in Uppsala ...
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bioRxiv - Microbiology 2024Quote: ... and strand-specific transcriptome sequencing (RNA-Seq) libraries were constructed using the KAPA RNA HyperPrep kit (Illumina, San Diego, CA, USA). Sequencing was carried out on an Illumina NextSeq 500 instrument at the BPF Next-Gen Sequencing Core Facility at Harvard Medical School ...
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bioRxiv - Molecular Biology 2024Quote: ... The nuclei were tested for viability using DAPI and 50,000 nuclei were taken for tagmentation reaction as per the manual (Illumina tagmentation kit). The processed samples were subjected to library preparation similar to ChIP-seq methods.
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bioRxiv - Microbiology 2024Quote: ... Libraries for all samples were prepared using the Nextera™ DNA Flex Library Prep Kit (Illumina Inc., San Diego, CA, USA), and the subsequent shotgun sequencing was executed on a NovaSeq 6000 system (Illumina Inc. ...
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bioRxiv - Genetics 2024Quote: Total RNA from mouse glomeruli was sequenced on a HiSeq 4000 following standard workflow using NEBNext Ultra II RNA Library Preparation kit (New Englab Biolabs, MA)(Illumina, CA) and paired-end sequencing (Genewiz ...
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bioRxiv - Evolutionary Biology 2024Quote: ... nerve chain and ovaries of each female was extracted using standard protocols (DNA used for ONT sequencing: Macherey-Nagel NucleoBond HMW DNA kit, DNA used for Illumina sequencing ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Short-inserts of 150-bp paired-end libraries were prepared for each individual using a Nextera XT DNA Library Preparation Kit (Illumina, Japan) and 16 PCR cycles ...
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bioRxiv - Synthetic Biology 2024Quote: ... Barcoded RNA-seq libraries were prepared from 1 μg of total RNA using the TruSeq Stranded mRNA Library Prep kit according to the manufacturer’s instructions (Illumina Inc., USA). RNA-seq libraries were sequenced on an Illumina NovaSeq 6000 System according to the manufacturer’s protocol ...
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bioRxiv - Physiology 2024Quote: ... Stranded libraries were prepared with 100 ng of total RNA with the TruSeq Stranded mRNA Library Prep for NeoPrep Kit (Illumina, Inc.) per the manufacturer’s instructions ...
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bioRxiv - Plant Biology 2024Quote: ... The subsequent steps of library preparation were all carried out on the Agilent NGS Bravo workstation in 96-well plates following the instructions for the Illumina TruSeq Stranded mRNA kit (Illumina Cat no: 20020595, Illumina, USA). mRNA was purified from 300-800 ng of total RNA through selective-binding on poly dT-coated beads ...
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bioRxiv - Developmental Biology 2024Quote: ... RNA-seq libraries were then prepared using the Illumina TruSeq RNA Library Prep Kit v2 (Illumina, catalog no. RS-122-2001), adhering to the manufacturer’s instructions ...
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bioRxiv - Genetics 2024Quote: ... DNA was submitted to the Mammalian Genotyping Core at University of North Carolina to be genotyped using the Infinium Global Diversity Array-8 v.10 Kit (Illumina #20031669).
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bioRxiv - Genomics 2024Quote: ... Each strain had four short-read libraries prepared using the TruSeq Stranded mRNA Library Prep Kit (Illumina, San Diego, CA, USA), following the manufacturer’s recommendations ...
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bioRxiv - Genomics 2024Quote: ... ChIP-seq libraries were prepared from 10 ng of immunoprecipitated DNA using TruSeq ChIP Library Preparation Kit (Illumina, IP-202-1012) according to the manufacturer’s instructions with minor modifications ...
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bioRxiv - Molecular Biology 2024Quote: Amplicons were sequenced on a NextSeq 500 using a NextSeq 500/550 High Output v2.5 75 cycle kit (Illumina cat #20024906) or on a NextSeq 2000 using a NextSeq 1000/2000 P2 Reagents 100 cycle kit (Illumina cat #20046811) ...
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bioRxiv - Developmental Biology 2024Quote: ... The Tagment DNA Buffer and TDE1 enzyme are both contained in the Tagment DNA TDE1 Enzyme and Buffer Kit (Illumina, 20034197). The transposed chromatin was isolated using the Minelute PCR Cleanup kit (Qiagen ...
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bioRxiv - Genomics 2024Quote: ... RNA libraries for RNA-Seq were prepared using the Illumina TruSeq Stranded Total RNA Ribo-Zero Plant kit (Illumina, CA, US), and sequenced on the Illumina platform in paired-end mode and 150 bp read-length (Psomagen ...
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bioRxiv - Microbiology 2024Quote: ... Sequence libraries were prepared and pooled using the DNA prep and the NextSeq 500 mid-output reagent kits (Illumina, CA, USA). Illumina NextSeq 500 platform ...
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bioRxiv - Neuroscience 2024Quote: ... Half of the obtained dephosphorylated footprint RNA was processed further for rRNA depletion using Ribo-Zero Gold rRNA Removal Kit (Human/Mouse/Rat) (Illumina, MRZG12324). For each reaction ...
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bioRxiv - Evolutionary Biology 2024Quote: ... to ensure sufficient RNA of high quality in each sample and prepared libraries using the Illumina TruSeq® mRNA Stranded Kit (Product#: RS-122-2101, Illumina, Inc. ...
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bioRxiv - Microbiology 2024Quote: ... Amplicons were sequenced using Illumina’s v3 600-cycle (paired-end) reagent kit on a MiSeq (Illumina Inc., San Diego, CA, USA). Reads were demultiplexed based on the combination of index (CASAVA 1.8 ...
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bioRxiv - Microbiology 2024Quote: ... The cDNA libraries were constructed using the NEBNext® Ultra II Directional RNA Library Prep Kit for Illumina® and sequenced in paired-end (2×150 bp) on a NovaSeq 6000 (Illumina). After the confirmation of multiple virus infections in H ...
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bioRxiv - Microbiology 2024Quote: Samples were prepared by generating a uniquely indexed library from each of the RNA samples isolated from male pupae using the Illumina Stranded Total RNA Prep with RiboZero Plus Microbiome kit (Illumina, USA) and custom D ...
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bioRxiv - Microbiology 2024Quote: ... The pooled DNA library was paired end sequenced at 2×300 bp using a MiSeq Reagent Kit v3 on Illumina MiSeq platform (Illumina, CA), at Baylor University.