Labshake search
Citations for Illumina :
901 - 950 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Microbiology 2024Quote: ... Paired-end sequencing was performed on the Illumina sequencing platform (San Diego, CA, USA) according to the manufacturer’s instructions (Illumina).
-
bioRxiv - Microbiology 2024Quote: ... Massive parallel sequencing was conducted using NextSeq 550 System (Illumina Technology) and NextSeq 550 System High-Output Kit to produce ∼4 M Pair Ended reads and 2.4 Gb/sample sequence (Comeau et al. ...
-
bioRxiv - Microbiology 2024Quote: ... and diluted to 5 pM prior to sequencing on an Illumina MiSeq platform with a 2 × 250 bp paired-end protocol (Illumina, San Diego, CA, USA). Sequencing reads were deposited in the European Nucleotide Archive (ENA ...
-
bioRxiv - Microbiology 2024Quote: ... Illumina libraries were prepared with the TruSeq Str-RNA Zero and sequencing was performed on a 150 PE HiSeq 4000 (Illumina) at the Genomic Technologies Facility in Lausanne ...
-
bioRxiv - Microbiology 2024Quote: ... Sequencing libraries were prepared from 700 ng total RNA using the TruSeq stranded mRNA library preparation kit (Cat# 20020594/5, Illumina Inc.) including polyA selection ...
-
bioRxiv - Cancer Biology 2024Quote: ... Equimolar libraries from each sample were pooled and subjected to 75-bp paired-end sequencing on a NextSeq 550 machine (Illumina). Raw reads were demultiplexed and FASTQ files were generated using Bcl2fastq v2.20.0.422 (Illumina) ...
-
bioRxiv - Cancer Biology 2024Quote: ... followed by tagmentation performed using Nextera Tn5 transposase (Illumina Nextera ATAC seq kit, 20034197). Libraries were prepared using dual-end indexing using NEBNext Ultra II DNA Library Prep Kit (New England Biolabs ...
-
bioRxiv - Cancer Biology 2024Quote: ... followed by rRNA removal using Ribo-Zero (Illumina) according to manufacturers’ recommendations ...
-
bioRxiv - Cancer Biology 2024Quote: Whole exome sequencing (WES) was performed using the Nextera Exome Enrichment Kit (Illumina). 2 x 100 nucleotide paired end sequences were input into Illumina HisSeq2000 with an output of 100 nucleotide paired end reads in FASTQ format ...
-
bioRxiv - Cancer Biology 2024Quote: Genomic DNA was used for copy number analysis performed as described previously42 using a HiSeq 4000 (Illumina) sequencer in a single-read 50-cycle run mode ...
-
bioRxiv - Cancer Biology 2024Quote: ... paired-end 150bp sequencing was performed on the NovaSeq (Illumina) platform ...
-
bioRxiv - Cancer Biology 2024Quote: Paired-end 150bp sequencing was performed on the MiSeq (Illumina) platform.
-
bioRxiv - Cancer Biology 2024Quote: ... Libraries were pooled and sequenced in (2 x 100bp) on the NovaSeq-6000 (Illumina). Gene and ERV expression was quantified as described (11,31 ...
-
bioRxiv - Cancer Biology 2024Quote: ... Sequencing of the libraries was performed on the NovaSeq-6000 at Gustave Roussy (Illumina; 50 bp paired-end reads). ATAC-seq data were processed essentially as described (15 ...
-
bioRxiv - Cancer Biology 2024Quote: ... RNA-seq libraries were sequenced on Illumina NextSeq 550 (Illumina, San Diego, CA, USA) with single 76 bp reads ...
-
bioRxiv - Cancer Biology 2024Quote: ... Paired-end sequencing was carried out on a MiSeq instrument (Illumina, Inc.). Analysis was performed with the DNA Amplicon App v2.1.1 on BaseSpace Sequence Hub Professional and Variant Interpreter v2.11.1.1 (Illumina) ...
-
bioRxiv - Cancer Biology 2024Quote: ... RNF43 exome sequencing was performed using a RNF43 Custom Panel (Illumina). Paired-end sequencing was carried out on a MiSeq instrument (Illumina ...
-
bioRxiv - Cancer Biology 2024Quote: ... Analysis was performed with the DNA Amplicon App v2.1.1 on BaseSpace Sequence Hub Professional and Variant Interpreter v2.11.1.1 (Illumina). Single nucleotide polymorphisms and INDELS with a quality score of > 90 ...
-
bioRxiv - Cancer Biology 2024Quote: ... Libraries were pooled in equal quantities and sequenced using Illumina HiSeq 2500 (Illumina) to produce ∼30 million paired-end reads (50x50 bases ...
-
bioRxiv - Cancer Biology 2024Quote: ... P-BOs and NP-BOs and 30X target depth for matched normal (blood) was performed by Illumina, the Sanger Institute ...
-
bioRxiv - Cancer Biology 2024Quote: ... the sequencing was performed under the setting of single read 1×51 bp to generate ∼30 million reads per sample on HiSeq 1000 sequencer (Illumina).
-
bioRxiv - Cancer Biology 2024Quote: ... 2.5 μL Tn5 transposase (Illumina 15027865), and 5 μL water ...
-
bioRxiv - Cancer Biology 2024Quote: ... Nuclei were resuspended in 50 μL tagmentation reaction containing 25 μL 2X tagmentation buffer (Illumina 15027866), 16.5 μL PBS ...
-
bioRxiv - Cancer Biology 2024Quote: ... Libraries were sequenced as paired-end reads on a NextSeq instrument (Illumina).
-
bioRxiv - Cancer Biology 2024Quote: ... Libraries were amplified and sequencing was performed in thirty-five base pair paired-end reads on a NextSeq instrument (Illumina). For single cell ATAC-seq ...
-
bioRxiv - Cell Biology 2024Quote: ... and MMP14 were determined by RNA sequencing (Illumina HiSeq) in both cancerous and normal tissue samples ...
-
bioRxiv - Cancer Biology 2024Quote: ... and equimolar libraries were pooled and subjected to 75-bp paired-end sequencing on a NextSeq 550 machine (Illumina). Raw reads were demultiplexed and FASTQ files were generated ...
-
bioRxiv - Cancer Biology 2024Quote: ... Raw reads were demultiplexed and FASTQ files were generated using Bcl2fastq v2.20.0.422 (Illumina). The reads were trimmed for low quality/adapter sequence using Trimmomatic (RRID:SCR_011848 ...
-
bioRxiv - Cancer Biology 2024Quote: ... then resuspended in 1X Tagment DNA buffer (Illumina) with 2.5 μl Tagment DNA Enzyme (Illumina ...
-
bioRxiv - Cancer Biology 2024Quote: ... 2 µg of total RNA were depleted for ribosomal RNA using a Ribo-Zero-rRNA removal kit (Illumina), followed by random primed cDNA synthesis ...
-
bioRxiv - Cancer Biology 2024Quote: ... RNA-seq libraries for the cell lines and the CLL RNA were prepared using the TruSeq-stranded-total RNA SamplePrep kit (Illumina) according to the manufacturer’s protocol ...
-
bioRxiv - Cancer Biology 2024Quote: ... Sequencing libraries were run at the sequencing core unit of the Max-Planck Institute for Molecular Genetics on a HiSeq2500 (Illumina) using 50 bp paired-end reads.
-
bioRxiv - Cancer Biology 2024Quote: ... Libraries were pooled and single-end sequenced (1×75 bp) on the Illumina NextSeq 500 using the High-Output V2 Kit (Illumina). Read data were processed in BaseSpace ...
-
bioRxiv - Cancer Biology 2024Quote: ... mRNA was isolated from 1.2 μg of total RNA and used to generate dual-indexed cDNA libraries with the Illumina stranded mRNA ligation kit (Illumina) and UD Indexes Set A (Illumina) ...
-
bioRxiv - Cancer Biology 2024Quote: ... An equimolar pool was prepared with the thirty-two libraries for SE75 sequencing on a NextSeq550 (Illumina).
-
bioRxiv - Cancer Biology 2024Quote: ... with 2.5 μl Tagment DNA Enzyme (Illumina) and incubated at 37 °C for 30 min ...
-
bioRxiv - Cancer Biology 2024Quote: ... ChIP-seq libraries were prepared using NEBNext DNA Ultra II library prep kit and sequenced by Illumina MiSeq.
-
bioRxiv - Cancer Biology 2024Quote: ... An equimolar pool was prepared with the thirty-two libraries for SE75 sequencing on a NextSeq550 (Illumina). Sequencing output was above 1,015 million 75-nt long single-end reads and a minimum of 27.7 million reads were obtained for all samples.
-
bioRxiv - Cancer Biology 2024Quote: ... PCR products were sequenced on a HiSeq 4000 instrument (Illumina) at 50bp reads to a depth of 30M reads per sample.
-
bioRxiv - Cancer Biology 2024Quote: ... and UD Indexes Set A (Illumina). Ten cycles of PCR amplification were applied to all libraries.
-
bioRxiv - Developmental Biology 2024Quote: ... and 0.01% Digitonin) and nuclei were collected for tagmentation at 37 °C for 30 minutes (Illumina Tagment DNA Enzyme and Buffer Small Kit) ...
-
bioRxiv - Developmental Biology 2024Quote: ... Libraries were pooled and sequenced using a P3-100 kit from Illumina in a NextSeq2000 sequencer following manufacturer’s instructions.
-
bioRxiv - Developmental Biology 2024Quote: ... Libraries were pooled and sequenced using a P3-100 kit from Illumina in a NextSeq2000 sequencer following manufacturer’s instructions.
-
bioRxiv - Developmental Biology 2024Quote: ... then pooled at same molarity and paired-end sequenced with a P2-100 kit from Illumina in a NextSeq2000 sequencer following manufacturer’s instructions.
-
bioRxiv - Developmental Biology 2024Quote: ... and then treated for 30 minutes at 37°C with Tn5 transposase (Illumina, 20034197). The DNA was extracted using DNA Clean and Concentrator 5-kit (Zymo Research ...
-
bioRxiv - Developmental Biology 2024Quote: ... Libraries were pooled and sequenced using a H75 kit from Illumina in a NextSeq500 sequencer following manufacturer’s instructions.
-
bioRxiv - Developmental Biology 2024Quote: ... The integrity of the CRISPRi library was validated by Illumina Miseq through Cornell Genomics Facility (detailed library preparation steps are presented below in “Library validation and CRISPRi dropout screening”).
-
bioRxiv - Developmental Biology 2024Quote: ... a shallow sequencing run was performed on a NextSeq 500 (Illumina) prior to deep sequencing on a NovaSeq S4 (Illumina) ...
-
bioRxiv - Cancer Biology 2024Quote: ... Library preparation and sequencing was performed at the QUT Central Analytical Research Facility (CARF) using the Illumina TruSeq Stranded mRNA Sample Prep Kit (strand-specific, polyA enriched, Illumina, San Diego, USA) with an input of 1 µg total RNA (RIN>9) ...
-
bioRxiv - Cancer Biology 2024Quote: ... and >95% of all exons of that gene was represented on the sequencing platform used to generate the data (GENIE has 104 different platforms, mostly Illumina-based but differing in genes being captured) ...