Labshake search
Citations for Illumina :
8151 - 8200 of 8781 citations for Parallel Artificial Membrane Permeability Assay PAMPA Kit since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Neuroscience 2021Quote: ... 300 pg of cDNA from each sample was used as input for library preparation with the Nextera XT DNA Library Prep Kit (Illumina FC-131-1096). Fragmentation and adaptors insertion were performed by tagmentation ...
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bioRxiv - Genomics 2021Quote: ... Genomic DNA libraries for short- and long-read sequencing were generated with the TruSeq DNA PCR-Free Kit (Illumina, San Diego, CA, USA) and the SMRTbell Express Template Prep Kit 2.0 (PacBio ...
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bioRxiv - Immunology 2020Quote: ... 500 ng of total RNA underwent polyA selection and TruSeq library preparation according to instructions provided by Illumina (TruSeq Stranded mRNA LT Kit), with 8 cycles of PCR ...
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bioRxiv - Microbiology 2020Quote: ... Individual libraries were constructed from some of the strain DNA preparations described above using an Illumina Nextera XT DNA sample preparation kits with appropriate indices tags according to the manufacturer’s instructions (Illumina Inc., San Diego, CA). The libraries were pooled together and run on an Illumina MiSeq DNA sequencer (Illumina Inc. ...
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bioRxiv - Microbiology 2021Quote: The cDNA synthesis and library construction were done using a TruSeq Stranded mRNA LT Sample Prep Kit (Illumina Inc., San Diego, CA, USA) following the manufacturer’s protocol ...
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bioRxiv - Genomics 2020Quote: Messenger RNA capture based libraries were prepared starting from 8.5 µL DNase treated and spike-in supplemented RNA eluate using the TruSeq RNA Exome Library Prep Kit (Illumina, San Diego, CA, USA). Each sample underwent individual enrichment according to the manufacturer’s protocol ...
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bioRxiv - Cancer Biology 2020Quote: ... is a 30-gene NGS test for somatic mutations in myeloid neoplasms using the Truseq Amplicon Cancer Panel kit (Illumina, San Diego, CA). It contains amplicons for hot-spot locations of the following genes ...
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bioRxiv - Cancer Biology 2020Quote: ... Libraries were pooled and single end-sequenced (1×75) on the Illumina NextSeq 500 using the High output V2 kit (Illumina, San Diego, CA). Quality control was performed using Fastqc (v0.11.5 ...
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bioRxiv - Neuroscience 2020Quote: ... Library preparation for RNA-Seq was performed using the TruSeq™ RNA Sample Prep Kit v2 (Illumina, Cat. N°RS-122-2002, U.S.A.) starting from 50 ng of total RNA ...
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bioRxiv - Developmental Biology 2021Quote: ... libraries were prepared using the Quant-seq 3’ mRNA Library Prep Kit FWD (Lexogen, Greenland, NH) and single-end 75bp reads were sequenced on the NextSeq 500 (Illumina, San Diego, CA). Genes queried for hiPSC identity were listed on the TaqMan hPSC Scorecard Assay (Thermo Fisher Scientific ...
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bioRxiv - Neuroscience 2020Quote: ... Next generation sequencing and bioinformatics analysis was performed by the National Genomics Infrastructure (NGI) at the Science for Life Laboratory on the HiSeq 2500 System using the HiSeq Rapid SBS Kit v2 (Illumina, San Diego, CA) generating >13.5 M reads/sample ...
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bioRxiv - Genomics 2022Quote: ... Libraries depleted of ribosomal RNA (figure 2 and 3A-B) were constructed with the TruSeq Total RNA with Ribo Zero plant Kit (Illumina, San Diego, USA), according to the manufacturer’s instructions ...
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bioRxiv - Genetics 2022Quote: ... Libraries were constructed using the Lexogen QuantSeq 3′ mRNA-Seq Library Kit FWD (Lexogen, Greenland, NH) and sequenced on an Illumina NextSeq 500 producing 85 nt single-end reads (Illumina, San Diego, CA) with each plate being split in half and each half being sequenced on a single lane to achieve desirable coverage.
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bioRxiv - Immunology 2022Quote: ... The amplicons were quantified using KAPA Library Quantitation kit (KAPA, Cape Town, South Africa) and an equimolar amount of each sample was sequenced on the MiSeq System (Illumina, San Diego, CA) with 2×150 paired-end run parameters ...
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bioRxiv - Cancer Biology 2022Quote: ... RNA-Seq libraries were generated from 300 ng of total RNA using TruSeq Stranded mRNA Library Prep Kit and IDT for Illumina - TruSeq RNA UD Indexes (96 Indexes, 96 Samples) (Illumina, San Diego, USA), according to manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2022Quote: ... Post-ligation cleanup proceeded according to Illumina’s instructions with 110 µL Sample Purification Mix from the TruSeq Methyl Capture EPIC LT Library Prep Kit (Illumina catalog # FC-151-1002). After purification ...
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bioRxiv - Genetics 2022Quote: ... Individual barcoded libraries were randomly multiplexed into groups of four samples using equimolar quantities and sequenced on a MiSeq using a v3 600 reagent kit (Illumina, San Diego, CA) to generate paired-end 250 bp reads ...
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bioRxiv - Genetics 2022Quote: ... Output total RNA was depleted for ribosomal RNA and prepped for RNA-seq using the Scriptseq Complete Gold (Epidemiology) kit (Illumina, San Diego, CA). A total of ~50 ng of ribosomal depleted RNA was used as an input to transcriptome libraries ...
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bioRxiv - Evolutionary Biology 2022Quote: ... Two independent paired-end libraries were constructed per population from these DNA pools using the Genomic DNA Sample Preparation Kit (Illumina, San Diego, CA) (technical replicates) ...
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bioRxiv - Cancer Biology 2020Quote: RNA libraries were prepared from 550ng of total RNA using the TruSeq Stranded Total RNA HT kit with Ribo-Zero Gold (Illumina, San Diego, USA) as per manufacturer’s instructions and subjected to paired end 75 sequencing on a HiSEQ4000 platform (Illumina ...
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bioRxiv - Cancer Biology 2020Quote: ... RNA-Seq libraries preparation and sequencing was performed by the IGA Technology Services (Udine, Italy) using the Illumina TruSeq Stranded mRNA Kit (Illumina, San Diego, CA) according to manufacturer’s instructions ...
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bioRxiv - Systems Biology 2020Quote: ... Total-RNA stranded transcriptome libraries were prepared using the TruSeq Stranded Total RNA LT Sample Prep Kit starting from the fragmentation step in the manufacturers protocol (Illumina, RS-122-2201). Paired-end sequencing (2×125-bp ...
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bioRxiv - Evolutionary Biology 2020Quote: ... RNA-seq libraries were generated using SENSE Total RNA-seq Library Prep Kit v2 (Lexogen, Vienna, Austria) following the manufacturer’s protocol and sequenced on NextSeq 500 (Illumina, San Diego, CA, USA) using single-end 75 bp chemistry.
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bioRxiv - Developmental Biology 2020Quote: ... cDNA libraries were then tagmented using the Illumina/Nextera DNA prep kit (FC 121-1030) with index tags from Illumina (FC 121-1031), cleaned up with Ampure XP beads ...
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bioRxiv - Genomics 2020Quote: ... Sequencing was performed on the Illumina HiSeq 2500 single end 126 bp using the TruSeq SBS Kit v4-HS (Illumina, Inc, California, USA).
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bioRxiv - Neuroscience 2020Quote: ... cDNA libraries with an average size of 1.5-2 kb were tagmented and indexed during a second PCR amplification step with the Illumina Nextera XT DNA preparation kit (Illumina, FC-131-1024). Tagmentation was performed according to the manufacturer’s protocol with an input of 500 pg cDNA and amplicon tagment mix for 5 min at 55 °C ...
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bioRxiv - Pharmacology and Toxicology 2021Quote: ... All samples and all libraries were of good quality and 75 bp single end reads were generated for each library using the Illumina NextSeq®500 v2.5 High-output 150 cycle kit (Illumina Inc., Cambridge, UK). A total of 153,887,020 reads were generated for the 36 samples (4,274,639 ± 1,905,806 reads per sample).
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bioRxiv - Pharmacology and Toxicology 2021Quote: ... and 75 bp paired-end reads were generated for each library using the Illumina NextSeq®500 v2.5 High-output 150 cycle kit (75bp paired-end reads, Illumina Inc., Cambridge, UK). A total of 455,308,427 reads (average of 12,647,456 ± 2,461,518 reads per sample ...
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bioRxiv - Microbiology 2021Quote: ... The sequencing amplicon pools were diluted to 0.2 ng/µl and tagmented with Nextera XT library prep kit (Illumina, Cat#FC-131-1024). Nextera libraries were dual-barcoded and sequenced on an Illumina NextSeq1000 instrument ...
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bioRxiv - Physiology 2020Quote: ... Library preparation was performed with 1μg total RNA using the TruSeq Stranded mRNA Library Prep Kit High Throughput (Cat# RS-122-2103, Illumina, San Diego, CA, USA). Libraries were quality-checked on the Fragment Analyzer (Advanced Analytical ...
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bioRxiv - Microbiology 2021Quote: Illumina libraries were prepared for paired-end 250-bp sequencing (2 × 250 bp) using the Nextera DNA Flex Library kit (Illumina, San Diego, CA). The libraries were sequenced at the UC Davis Genome Center (Davis ...
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bioRxiv - Microbiology 2020Quote: DNA libraries of virome DNA were prepared using the same methods as described for genome sequencing and were sequenced on an Illumina HiSeq 2500 sequencer with a HiSeq v4 SBS sequencing kit (Illumina, San Diego, CA) producing 2×160-bp paired-end reads ...
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bioRxiv - Microbiology 2020Quote: ... The pool was sequenced on an Illumina MiSeq using the 2 × 250 bp v2 kit with a 10% PhiX control following the manufacturer’s protocol (Illumina, Inc., San Diego, CA) and using custom primers developed from (55) ...
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bioRxiv - Evolutionary Biology 2020Quote: ... Sequencing libraries were prepared according to the TruSeq stranded total library preparation kit with RiboZero Gold treatment (Illumina, Inc., Cat No.20020598/9). Paired-reads (150 bp ...
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bioRxiv - Microbiology 2021Quote: ... genomic DNA was extracted from the ovary tissue of a single cricket using Qiagen DNeasy kits as described above and sequenced using a NovaSeq 6000 Sequencing System (Illumina, San Diego, USA) with 2×150 bp output generating 12.2 giga base pairs of data ...
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bioRxiv - Genomics 2021Quote: RNA-Seq library preparation was carried out from 1 µg total RNA using the TruSeq Stranded mRNA kit (Illumina, San Diego, CA, USA), which allows mRNA strand orientation (sequence reads occur in the same orientation as anti-sense RNA) ...
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bioRxiv - Neuroscience 2021Quote: ... 600 pg of pre-amplified cDNA were then used as input for Tn5 transposon tagmentation by the Nextera XT DNA Library Preparation Kit (96 samples) (Illumina, San Diego, CA) followed by 12 cycles of library amplification ...
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bioRxiv - Developmental Biology 2021Quote: ... Six hundred pg of pre-amplified cDNA were then used as input for Tn5 transposon tagmentation by the Nextera XT DNA Library Preparation Kit (96 samples) (Illumina, San Diego, CA) followed by 12 cycles of library amplification ...
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bioRxiv - Genetics 2020Quote: ... Non-stranded cDNA libraries were prepared with a TruSeq RNA sample preparation kit v2 and sequenced on a HiSeq 2000 (Illumina, San Diego, CA) using SBS v3-HS reagents for paired-end sequencing (2 x 100bp) ...
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bioRxiv - Evolutionary Biology 2020Quote: ... Sample-wise library preparation following manufacturer’s instructions for paired- end sequencing were carried out using the Illumina TrueSeq Nano Library kit (Illumina, San Diego, CA, USA). DNA pools were sequenced in two multiplexed batches of 6 samples (3 selected and 3 control population per batch ...
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bioRxiv - Genetics 2021Quote: ... was sequenced using 300 bp paired-end sequencing reads prepared with the MiSeq Reagent Kit v3 on an Illumina MiSeq sequencer (Illumina, San Diego, CA). To this end ...
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bioRxiv - Genomics 2021Quote: ... The transcriptomic library was prepared using Illumina TruSeq Stranded Total RNA library preparation kit with Ribo-Zero workflow and 150 bp paired-end reads were generated on Illumina Novaseq 6000 instrument (Illumina Inc., CA, USA). The detailed information related to species identification and DNA-RNA extraction is mentioned in Supplementary Notes 1.
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bioRxiv - Genomics 2021Quote: ... RNA-seq libraries were prepared from 500 ng total RNA using the TruSeq stranded mRNA library preparation kit (Illumina Inc, Cat# 20020594/5) including polyA selection ...
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bioRxiv - Pharmacology and Toxicology 2020Quote: ... The final library pool was sequenced twice on the NextSeq500 at 1.1pM and 75bp paired-end reads were generated for each library using the Illumina NextSeq®500 v2.5 High-output 150 cycle kit (Illumina Inc., Cambridge, UK). A total of 319,920,579 reads (average of 13,330,024 ± 3,068,802 reads per sample ...
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bioRxiv - Zoology 2021Quote: Short-read sequencing libraries were constructed from 50 ng of genomic DNA using a Nextera XT DNA Library Preparation Kit (Illumina; San Diego, USA) following manufacturer’s protocol ...
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bioRxiv - Microbiology 2021Quote: ... Libraries from all seven viromes were built according to the manufacturer’s instructions using the Nextera® XT DNA Kit (Illumina, San Diego, US) and sequenced as paired-end reads on an Illumina NextSeq500 platform using the Mid Output Kit v2 (2×150 cycles) ...
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bioRxiv - Immunology 2020Quote: ... An input of 1 ng of total RNA were prepared and indexed separately for sequencing using the CloneTech SMART ultra-low RNA input Prep Kit (Illumina, San Diego, CA) as per manufacturer’s instruction ...
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bioRxiv - Evolutionary Biology 2021Quote: ... A paired-end library was constructed from 1 µg of the DNA using TruSeq DNA PCR-Free LT Sample Prep kits (Illumina K.K., Tokyo, Japan) following the manufacturer’s instructions ...
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bioRxiv - Evolutionary Biology 2021Quote: ... Paired-end libraries were constructed from 100 ng of the total RNAs using TruSeq RNA Library Prep kits v2 (Illumina K.K., Tokyo, Japan) following the manufacturer’s instructions ...
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bioRxiv - Cancer Biology 2021Quote: ... RNA-seq libraries were generated with 1 μg of RNA as input using the TruSeq RNA Sample Prep Kit (Illumina, San Diego, CA) with poly(A)-enrichment according to the TruSeq protocol ...