Labshake search
Citations for Illumina :
8401 - 8450 of 8781 citations for Parallel Artificial Membrane Permeability Assay PAMPA Kit since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cancer Biology 2024Quote: ... Single-indexed and multiplexed samples were run on an Illumina Next Seq 500 sequencer using a NextSeq 500 v2 kit (FC-404–2005; Illumina, San Diego, CA) for paired-end sequencing ...
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bioRxiv - Immunology 2024Quote: ... 60,000 naive CD4+ T cells from each biological replicate were spun down for nuclei isolation followed by transposition using Tn5 transposase from the Tagment DNA (TD) TDE1 Enzyme and Buffer Kit (Illumina, cat. no. 20034197). After transposition ...
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bioRxiv - Cancer Biology 2024Quote: ... using 2 × 100-bp paired-end reads and 2 × 12-bp index reads with either a 200- or 300-cycle kit (Illumina, 20012861 or 20012860).
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bioRxiv - Genomics 2024Quote: ... Illumina sequencing adapters and index barcodes were added to the amplicon target using the Nextera XT DNA Library Preparation Kit (Illumina Inc, CA, US), after which the libraries were pooled for sequencing ...
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bioRxiv - Genomics 2024Quote: ... mRNA enrichment and preparation of barcoded cDNA libraries were done using the TruSeq RNA Sample Prep Kit (Illumina, Inc., San Diego, CA, USA). F ...
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bioRxiv - Systems Biology 2024Quote: ... and sequencing on the Illumina HiSeq 3000 platform by the University of California Los Angeles Technology Center for Genomics and Bioinformatics (UCLA, CA, USA) using standard kits and protocols (Illumina Inc. CA, USA). Sequencing comprised 3 lanes of 50 nt reads ...
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bioRxiv - Plant Biology 2024Quote: ... The denatured pool was loaded on an Illumina MiSeq Sequencer for quality control with a 300 cycle MiSeq Reagent Kit v2 (Illumina MS-102-2002) at 10pM concentration with a 1% phiX control v3 spike (Illumina FC-110-3001) ...
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bioRxiv - Synthetic Biology 2024Quote: ... we performed 12 cycles of pre-amplification PCR and 12 cycles of index PCR and used 0.002 ul TDE1 Tn5 enzyme per cell (Illumina Tagment DNA TDE1 Enzyme and Buffer Kits; Illumina, San Diego, CA, USA). Sequencing was performed using an SE100 sequencing kit (MGI) ...
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bioRxiv - Genetics 2024Quote: ... Sequencing was performed on an Illumina MiSeq instrument with v2 flow cell and a 300-cycle reagent kit (MS-102-2002; Illumina, San Diego, CA) with 2×150 paired-end reads to achieve the desired coverage ...
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bioRxiv - Developmental Biology 2024Quote: ... cDNA mix was diluted to 0.2ng/μl and used for library preparation as described earlier (Trombetta et al., 2014) using Nextera XT DNA Library Prep Kit (Illumina, #FC-131-1024). Briefly ...
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bioRxiv - Developmental Biology 2024Quote: ... 500 ng of total RNA from each sample was used for the RNA-Seq library preparation using the TruSeq Stranded mRNA kit (Illumina, San Diego, CA) following the manufacturer’s instructions[7] ...
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bioRxiv - Developmental Biology 2024Quote: Total RNA samples were prepared for mRNA-Sequencing using the Illumina Stranded mRNA Ligation Sample Preparation kit following the manufacturer’s protocol (Illumina, San Diego, CA, USA). Libraries were validated for lengths ...
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bioRxiv - Microbiology 2020Quote: ... Proteomics and Bioinformatics Laboratory at the University of Hawai‘i – Mānoa sequenced the libraries in two runs using separate 300-bp paired-end Illumina MiSeq v3 reagent kits (Illumina Inc., San Diego, CA, USA). Sequence data are available at the Sequence Read Archive as PRJNA543421.
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bioRxiv - Synthetic Biology 2021Quote: ... genomic library was prepared from four strains (B0, B1, B2 and B3) using the Nextera XT Library Preparation Kit (Illumina, San Diego, CA, USA), according to the manufacturer’s protocol ...
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bioRxiv - Cell Biology 2020Quote: ... Stranded mRNA-seq libraries were prepared at EMBL Genecore facility from 200ng of total RNA using the Illumina TruSeq RNA Sample Preparation v2 Kit (Illumina, San Diego, CA, USA) implemented on the liquid handling robot Beckman FXP2 ...
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bioRxiv - Evolutionary Biology 2020Quote: ... Libraries from herbarium samples were prepared with 22–157 ng of gDNA using Illumina TruSeq Nano DNA LT Sample Prep kit (Illumina, San Diego, CA, USA). They were sequenced at the GenoToul-GeT-PlaGE platform (Toulouse ...
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bioRxiv - Cell Biology 2020Quote: ... Single-end sequencing was performed on an Illumina HiSeq2000 instrument using the TruSeq SBS Kit HS-v3 (50-cycle) (Illumina, San Diego, CA, US).
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bioRxiv - Evolutionary Biology 2020Quote: ... Libraries were constructed using 1ng of input DNA in a Low Input, Transposase Enabled (LITE) pipeline developed at the Earlham Institute (Norwich, UK) and based on the Illumina Nextera kits (Illumina, San Diego, CA, USA) [48] ...
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bioRxiv - Evolutionary Biology 2021Quote: ... Library preparation for Illumina sequencing was performed at the Transcriptome and Genome Analysis Laboratory Goettingen (TAL) using the TruSeq RNA Library Prep Kit v2 (Illumina, San Diego, CA, USA). Pooled libraries were run on an Illumina HiSeq 4000 to produce 50bp single end reads ...
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bioRxiv - Genomics 2020Quote: ... The remaining 1μl re-dissolved contents were tagmented using 0.6 μl TD Tagmentation buffer and 0.3 μl ATM Tagmentation enzyme from Nextera XT DNA Library Prep Kit (Illumina, catalog no. FC-121-1030) for 5min at 55 °C ...
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bioRxiv - Genomics 2020Quote: ... Individual libraries for each of the analyzed bovines (N=16) were processed using the TruSeq Stranded mRNA Preparation kit (Illumina, San Diego, CA, USA) according to manufacturer’s instructions ...
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bioRxiv - Evolutionary Biology 2022Quote: Genomic DNA from all smut species was isolated using a MasterPure™ Complete DNA&RNA Purification Kit (Epicentre®, Illumina®, Madison, Wisconsin, USA) according to the manufacturer’s instructions ...
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bioRxiv - Physiology 2022Quote: RNA-seq Expression Analysis: RNA-seq libraries were prepared from total RNA using the TruSeq Stranded mRNA kit (Illumina, Inc., San Diego, CA, USA). Library size distribution was validated using an Agilent 4200 TapeStation (Agilent Technologies ...
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bioRxiv - Genomics 2022Quote: RNA-Seq library preparations were carried out from 500ng to 2000ng of total RNA using the TruSeq Stranded mRNA kit (Illumina, San Diego, CA, USA), which allows mRNA strand orientation (sequence reads occur in the same orientation as antisense RNA) ...
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bioRxiv - Molecular Biology 2021Quote: ... newly synthesized RNA using TruSeq Stranded Total RNA LT Sample Prep Kit with Ribo-Zero Gold (Illumina, San Diego, CA, Cat# RS-122-2301) according to the Illumina protocol with the following modifications ...
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bioRxiv - Neuroscience 2021Quote: ... One hundred pg of amplified cDNA was tagmented and indexed for sequencing using a Nextera XT DNA Library Prep Kit (Illumina, San Diego, CA, USA). LabChip GX Touch HT High Sensitivity assay (PerkinElmer ...
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bioRxiv - Molecular Biology 2020Quote: ... RNA-seq libraries were sequenced using the Illumina NextSeq 500/550 platform with the High Output v2 kit (150 cycles) on paired-end mode (Illumina Inc, San Diego, CA). BCL files were converted to FASTQ and demultiplexed using the bcl2fastq conversion software (Illumina ...
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bioRxiv - Genomics 2020Quote: ... fragment libraries (average fragment sizes of ∼560 bp) were constructed using TruSeq DNA PCR-Free LT Library Prep Kit (Illumina, San Diego, CA, USA). Paired-end sequences of 150 bp long were determined using HiSeq X (Illumina) ...
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bioRxiv - Genomics 2020Quote: RNA libraries from all samples were prepared for shotgun transcriptomic sequencing using the TruSeq Stranded Total RNA Library kit from Illumina (San Diego, CA, USA), following manufacturer’s instructions ...
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bioRxiv - Genomics 2020Quote: ... a library with insert size of 270bp was constructed using TrueLib DNA Library Rapid Prep Kit for Illumina (Genetimes Technology Inc., Shanghai, China) and sequenced using Illumina HiSeq 4000 system (Illumina, San Diego, CA, USA). All raw reads were processed using a local perl script (developed by Biomarker Technologies Corporation ...
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bioRxiv - Genomics 2020Quote: Globin reduction and cDNA library preparation for total RNA was performed with the Illumina TruSeq Stranded Total RNA with Ribo-Zero Globin kit (Illumina, Inc., San Diego, CA). Library quality control included quantification with picogreen ...
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bioRxiv - Genomics 2020Quote: ... according to the instructions for qChIP-Seq and paired-end sequencing (2×75nt) was performed on a NextSeq 500/550 using a HighOutput v2 Kit for 150 cycles (Illumina #FC-404-2002, discontinued).
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bioRxiv - Genomics 2020Quote: ... according to the manufacturer’s instructions and paired-end sequencing (2 × 75 bp) was performed on a NextSeq 500/550 using a HighOutput v2 Kit for 150 cycles (Illumina #FC-404-2002, discontinued).
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bioRxiv - Genomics 2020Quote: ... was prepared from total RNA from a testicular tissue sample of one BSW bull homozygous for the mutant T-allele at Chr6:58373887 using the Illumina TruSeq RNA Sample Preparation Kit (Illumina, San Diego, CA, USA). The library was sequenced using an Illumina NovaSeq6000 instrument ...
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bioRxiv - Genetics 2021Quote: Tagmentation plates were prepared by the combination of 420 uL of 1400 nuclei/uL solution with 540 uL 2X TD Buffer (Nextera XT Kit, Illumina Inc. FC-131-1024). From this mixture ...
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bioRxiv - Genetics 2020Quote: ... were captured using Agilent (Santa Clara, CA, USA) SureSelect kits (version C2, December 2018) and sequenced using the NovaSeq platform (Illumina, San Diego, CA, USA). Sequence reads were aligned to the human reference sequence (original GRCh37 from NCBI ...
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bioRxiv - Evolutionary Biology 2020Quote: ... 2 x 150 NextSeq500 Shotgun Libraries were prepared from each sample using an Illumina TruSeq® Nano DNA Library Prep Kit (Illumina Inc, CA, USA). The quality of each library was checked using the Agilent 4200 Tape Station (Agilent Technologies ...
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bioRxiv - Genomics 2020Quote: ... Paired-end RNA libraries (2 × 150 bp) were prepared using total RNA purified from testis tissue using the Illumina TruSeq RNA Sample Preparation Kit (Illumina, San Diego, CA, USA). The libraries were sequenced at an Illumina NovaSeq6000 instrument yielding 49,198,010 and 70,451,148 reads ...
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bioRxiv - Genomics 2020Quote: ... or homogenized tissues were digested with proteinase K prior to DNA isolation using MasterPure™ DNA Purification Kit (Epicentre, by Illumina, Madison, United States) according to manufacturer’s instructions.
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bioRxiv - Immunology 2021Quote: ... libraries were prepared using the NEXTflex®Rapid Directional RNA-Seq Kit (Bio Scientific) and samples were sequenced 75 base pair single-end on Illumina NextSeq500 (Illumina, Utrecht DNA Sequencing Facility) and processed as described above ...
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bioRxiv - Immunology 2021Quote: ... prior to pooling and sequencing on an Illumina NextSeq 500 sequencer utilizing a BRB-seq custom primer and the High Output v2 kit (75 cycles) (Illumina, Cat. #FC-404-2005). The sequencing configuration is as follows ...
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bioRxiv - Zoology 2021Quote: ... Meta-transcriptome library preparation of each pool was carried out using the TruSeq™ Stranded Total RNA Sample Preparation Kit from Illumina (San Diego, CA) after removal of host ribosomal RNA using Illumina Ribo-Zero™ rRNA Removal Kits (San Diego ...
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bioRxiv - Evolutionary Biology 2020Quote: ... library preparation was performed using the Illumina TruSeq small RNA kit and cDNA was sequenced on an Illumina NextSeq platform (50bp; Illumina, San Diego, CA, USA). Adapter sequences were trimmed with cutadapt (v2.3 ...
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bioRxiv - Evolutionary Biology 2020Quote: ... Sequencing libraries were prepared using NEBNext Ultra II directional RNA library kit and paired-end sequenced (150bp) in an Illumina HiSeq3000 (Illumina Inc., San Diego, USA) instrument ...
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bioRxiv - Microbiology 2021Quote: ... An average 350-bp paired-end libraries were prepared from extracted genomic DNA by TruSeq DNA PCR-Free High Throughput Library Prep Kit (Illumina, San Diego, CA, USA). Pair-end sequencing (2× 150-bp ...
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bioRxiv - Developmental Biology 2021Quote: ... All cDNA libraries were pooled and sequenced to a depth of 355 million reads on a NextSeq500 machine (Illumina, 150 Cycle High Output Kit).
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bioRxiv - Cancer Biology 2021Quote: ... 356-500ng of total RNA with DV200% varying from 88-93 underwent ribosomal depletion and library preparation using the TruSeq Stranded Total RNA LT Kit (Illumina catalog # RS-122-1202) according to instructions provided by the manufacturer with 8 cycles of PCR ...
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bioRxiv - Cell Biology 2021Quote: Genomic DNA was isolated with the NucleoSpin Tissue kit (Macherey Nagel) and subsequently bisulfite converted and hybridized to the Infinium MethylationEPIC BeadChip (Illumina, San Diego, California, USA) at Life and Brain GmbH (Bonn ...
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bioRxiv - Physiology 2021Quote: ... the libraries were loaded onto an Illumina MiSeq sequencer and then sequenced using MiSeq Reagent kits v2 500 cycles (Illumina, San Diego, CA, USA) to obtain 250 bp paired-end reads ...
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bioRxiv - Plant Biology 2021Quote: ... A total of 20 RNA-Seq libraries (one per individual) were prepared with the TruSeq RNA Library Preparation Kit v2 (Illumina, San Diego, CA, USA) using 0.5 μg of starting RNA and aiming at a median insert size of ∼ 155 bp (standard fragmentation protocol) ...