Labshake search
Citations for Illumina :
8251 - 8300 of 8781 citations for Parallel Artificial Membrane Permeability Assay PAMPA Kit since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2022Quote: ... the cDNA libraries were sequenced at the Infectious Disease Sequencing Lab in the Kingston Health Sciences Centre using the MiSeq platform with a MiSeq reagent kit v2 (300 cycles) (Illumina MS-102-2002) producing 150 bp paired-end sequencing data ...
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bioRxiv - Synthetic Biology 2022Quote: ... the genome DNA was extracted and the genomic library was prepared by the TruSeq® DNA LT Sample Prep kit (Illumina Inc., USA). Then ...
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bioRxiv - Pharmacology and Toxicology 2022Quote: Total RNA samples (250ng of Qubit quantified total RNA input) were prepared for library preparation using the Illumina Stranded Total RNA Gold library preparation kit (Illumina, San Diego, CA) following the manufacturer’s protocol ...
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bioRxiv - Physiology 2022Quote: ... and 1.0 μL of each index primer of the Nextera XT Index Kit v2 Set B and Set C (FC-131-2002, FC-131-2003; Illumina Inc., CA., USA.). The first step ...
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bioRxiv - Neuroscience 2022Quote: ... The RNASeq libraries were prepared from total RNA using the TruSeq®Stranded mRNA LT Sample Prep Kit (Illumina Inc., Rev.E, October 2013). Briefly ...
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bioRxiv - Neuroscience 2022Quote: ... the pooled library was sequenced using a 600-cycle MiSeq Reagent Kit v3 and a MiSeq Illumina system a as per manufacturer’s instructions (Illumina, San Diego, CA, USA). The resulting data was processed using QIIME 271 ...
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bioRxiv - Neuroscience 2023Quote: ... Multiplex samples Pool (1.65 pM including PhiX 1%) was loaded in NextSeq 500/550 High Output v2 kit (75 cycles) cartridge (catalog #FC-404-1005; Illumina, San Diego, CA) and loaded on NextSeq 500 System machine (Illumina) ...
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bioRxiv - Plant Biology 2022Quote: ... The sequencing library was prepared from total RNA using the TrueSeq Ribo-Zero Plant RNA library prep kit (Illumina, San Diego, CA, USA) that removes ribosomal RNA ...
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bioRxiv - Zoology 2022Quote: ... Twelve 150 bp paired-end libraries (six for the Mamm01 primer set and six for the MiFish-U primer set) were prepared with an Illumina TruSeq DNA PCR-free LT Sample Prep kit (Illumina, San Diego, California), spiked with 8% phiX ...
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bioRxiv - Microbiology 2023Quote: ... after the construction of a paired-end sequencing library using the Illumina Nextera XT DNA sample preparation kit (Illumina, San Diego, CA, USA). Sequencing depth was 700X for AKK101 Lg ...
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bioRxiv - Neuroscience 2022Quote: ... Approximately 10 ug of total RNA was used to remove ribosomal RNA using an Epicentre Ribo-Zero Gold Kit (Illumina, San Diego, USA). Linear RNA was digested following standard protocols using Epicentre Ribonuclease R (Illumina ...
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bioRxiv - Molecular Biology 2022Quote: Amplified cDNA (0.25 ng) was used for preparing the sequencing library with the Nextera XT DNA Library Prep Kit (Illumina, San Francisco, CA, USA). Paired-end sequencing was performed on the MiSeq platform ...
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bioRxiv - Molecular Biology 2022Quote: ... The RNA-seq libraries were constructed with a TruSeq RNA Library Prep Kit v2 (Illumina Inc, San Diego, US, Cat. RS-122-2001) and sequenced on an Illumina NovaSeq 6000 platform to generate paired-end 150-bp reads as previously described (Ye et al. ...
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bioRxiv - Microbiology 2022Quote: ... greater than 8.0 were used to generate RNA sequencing libraries using the TruSeq Stranded mRNA Sample Prep Kit with TruSeq Unique Dual Indexes (Illumina, San Diego, CA). Samples were processed following manufacturer’s instructions ...
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bioRxiv - Microbiology 2022Quote: Purified ribodepleted RNA underwent library preparation using the Illumina TruSeq Stranded mRNA Sample Preparation kit following the manufacturer’s protocol modification for purified mRNA as input (Illumina, San Diego, CA, USA). Libraries were validated for length and adapter dimer removal using the Agilent TapeStation 4200 D1000 High Sensitivity assay (Agilent Technologies ...
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bioRxiv - Genomics 2022Quote: Illumina RNAseq libraries were prepared for both Porites lobata and Pocillopora meandrina using the TruSeq Stranded mRNA kit (Illumina, San Diego, CA, USA), according to the manufacturer’s protocol starting with 500 ng total RNA ...
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bioRxiv - Genomics 2022Quote: ... 1 μg of total RNA was used to prepare RNA-seq libraries with ribosomal RNA depletion using TruSeq Stranded Total RNA Library Prep Kit (Illumina, RS-122-2201). Two biological replicates per condition were sequenced in a HiSeq X-Ten (PE150 ...
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bioRxiv - Plant Biology 2022Quote: ... 100 ng of this genomic DNA was subsequently used to prepare Bisulfite libraries with the TruSeq Nano kit (Illumina, San Diego, CA, USA) according to the manufacturer’s instructions ...
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bioRxiv - Molecular Biology 2022Quote: ... before final pooling and subsequent run on a MiniSeq Sequencing System using the Miniseq High Output Kit (75 cycles) (Illumina #FC-420-1001) with a 10% of phiX spike-in.
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bioRxiv - Neuroscience 2022Quote: ... after which the pooled library was sequenced on a MiSeq system using a 600-cycle MiSeq Reagent Kit v3 as per manufacturer’s instructions (Illumina, San Diego, CA, USA). Post-processing of the data resulting from the MiSeq sequencing was conducted using QIIME 2 (Bolyen et al. ...
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bioRxiv - Neuroscience 2024Quote: ... Individually barcoded libraries were pooled and sequenced on a NextSeq mid-output paired-end sequencing run at 2×75 using NextSeq 500/550 Mid-Output v2.5 kit (Illumina, San Diego, CA, USA) according to the manufacturer’s instructions ...
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bioRxiv - Microbiology 2024Quote: ... Sequencing was performed using Pair-end 2×100 cycle mode on the Illumina NovaSeq 6000 system (NovaSeq 6000 S1 Reagent Kit v1.5 200 cycles Illumina, cat. no. 20028317; 0.5% of the PhiX control library, Illumina, cat. no. FC-110-3001) and the standard clustering procedure.
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bioRxiv - Immunology 2023Quote: ... which was performed on a MiSeq instrument with paired-end 2×300 bp reads using the NovaSeq 6000 SP Reagent Kit v1.5 (500 cycles) (Illumina, San Diego, California, USA). The protocol was approved by the ethics committee of Liège University Hospital (approval numbers 2021-54 and 2020/107).
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bioRxiv - Microbiology 2024Quote: We whole-genome sequenced each sample with Illumina technology (MiSeq and HiSeq 2500) using Nextera XT library preparation kits as instructed by the manufacturer (Illumina, San Diego, CA). Fastq files (raw sequencing data ...
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bioRxiv - Molecular Biology 2024Quote: ... Paired-end sequencing was carried out on an Illumina MiniSeq system according to the manufacturer’s instructions using a 300-cycle Mid or 300-cycle High kit (Illumina, San Diego, CA, USA), depending on the number of samples in each pool ...
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bioRxiv - Cancer Biology 2024Quote: ... Library preparation and sequencing was performed at the QUT Central Analytical Research Facility (CARF) using the Illumina TruSeq Stranded mRNA Sample Prep Kit (strand-specific, polyA enriched, Illumina, San Diego, USA) with an input of 1 µg total RNA (RIN>9) ...
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bioRxiv - Microbiology 2023Quote: ... Short-read genome sequencing was provided by MicrobesNG (microbesng.com) where DNA was prepared using the Nextera XT kit (Illumina, San Diego, CA, USA) and sequenced on the Illumina HiSeq platform (Illumina) ...
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bioRxiv - Neuroscience 2024Quote: ... Library preparation and small RNA sequencing of the PVH and ARC samples was performed as described previously (40) using a TruSeq® Small RNA Library Preparation kit (Illumina, Cambridge, UK). Libraries were sequenced using a HiSeq 4,000 platform ...
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bioRxiv - Evolutionary Biology 2024Quote: The transcriptome was sequenced using Illumina HiSeq 2000 2x150bp platform from cDNA libraries prepared using TruSeq RNA sample prep kit v2 (Illumina, San Diego, CA) at Macrogen Inc ...
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bioRxiv - Developmental Biology 2024Quote: ... >7 passed quality control and were used for library preparation with the Illumina Stranded mRNA Library Prep Kit according to manufacturer’s instructions (Cat #20040532, Illumina Inc., San Diego, CA). This procedure includes mRNA purification and fragmentation ...
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bioRxiv - Immunology 2024Quote: ... TRB sequencing was performed on pools of libraries from 11 - 15 tumor or skin samples on the Illumina MiSeq platform using a v3 150-cycle kit (Illumina, San Diego, CA) in the FHCC Genomics Core Facility (Seattle ...
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bioRxiv - Immunology 2024Quote: ... Sequencing of the PCR amplicons spanning the MHC loci was performed on the Illumina MiSeq platform using a v2 500-cycle kit (Illumina, San Diego, CA) in the FHCC Genomics Core Facility or the UCI-Fred Hutch Cancer Centre Laboratory.
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bioRxiv - Developmental Biology 2024Quote: ... library construction was immediately carried out using a Chromium Single Cell 3’ Reagent Kit (Version 3) and sequenced on an Illumina HiSeq 4000 or an Illumina NextSeq2000 (Illumina, cat no. 20040559) by the Technion Medicine Faculty Azrieli-Technion Genomics Center ...
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bioRxiv - Developmental Biology 2024Quote: ... Approximately 1 ng of cDNA per cell was transformed into a single-cell library using the Nextera XT DNA Library prep kit (Illumina FC-131-1096) and following the manufacturer’s instructions with slight modifications ...
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bioRxiv - Microbiology 2024Quote: Total RNA of 5 μg was used to construct strand-specific RNA-sequencing libraries using the TruSeq RNA sample preparation Kit from Illumina (San Diego, CA). Briefly ...
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bioRxiv - Microbiology 2024Quote: DNA samples were sequenced at the Center for Quantitative Life Sciences at Oregon State University (Corvallis, OR) on an Illumina HiSeq platform using a Nextera XT library preparation kit (Illumina, San Diego, CA). Primer and adaptor removal and read-trimming were performed with fastP using default settings for Nextera adapters (35) ...
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bioRxiv - Microbiology 2024Quote: ... DNAse-treated RNA extracts from Large RNA fractions were processed for library preparation using the Truseq Stranded mRNA sample preparation kit (Illumina, San Diego, California) according to the manufacturer’s instructions ...
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bioRxiv - Bioengineering 2024Quote: ... then the target exon was extracted with B2M exon primers with attached Nextera XT DNA Library Preparation Kit (Illumina, San Diego, Ca, USA) index adapter sequences ...
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bioRxiv - Immunology 2024Quote: ... paired-end libraries were constructed from 1 µg of the initial genomic material using the TruSeq DNA v2 Sample Prep Kit (Illumina, #FC-121-2001) as per the manufacturer’s instructions ...
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bioRxiv - Microbiology 2023Quote: ... The V3-V4 region of the 16S ribosomal RNA gene was amplified by PCR with universal bacterial primer sets (5’-TCGTCGGCAGCGTCAGATGTGTATAAGAGACAGCCTACGGGNGGCWGCAG-3’ and 5’-GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAGGACTACHVGGGTATCTAATCC-3’) and was sequenced using MiSeq Reagent kit v3 (600 cycle) (Illumina Inc., California, US). The sequence data were analyzed using QIIME2 (https://qiime2.org/ ...
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bioRxiv - Immunology 2023Quote: ... Approximately 1 ug of total RNA was used to remove ribosomal RNA according to the manuscript of the Epicentre Ribo-Zero Gold Kit (Illumina, San Diego, USA). Following purification ...
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bioRxiv - Microbiology 2023Quote: ... the short-read sequencing was done on Illumina NextSeq 550 platform using NextSeq 500/550 Mid-Output kit v2.5 (Illumina Inc, San Diego, USA) at a commercial sequencing facility (SA Pathology ...
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bioRxiv - Microbiology 2023Quote: ... were sequenced by Next-Generation Sequencing (NGS) on the Illumina MiSeq Platform using the Illumina COVIDSeq Kit for library construction (Illumina, San Diego, USA) generating paired-end reads 150 bp long ...
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bioRxiv - Genomics 2022Quote: ... The DNA paired-end libraries were constructed using either a Nextera DNA Flex or KAPA hyper library prep kit (Illumina, San Diego, USA); the RNA paired-end libraries were constructed using a TruSeq Stranded mRNA library prep kit (Illumina ...
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bioRxiv - Immunology 2023Quote: ... 100,000 nuclei per sample were isolated using an iodixanol gradient and ATAC-seq was subsequently performed according to the original protocol (Buenrostro et al, 2013) using Nextera DNA Sample preparation kit (Illumina, FC-121-1030). After library amplification ...
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bioRxiv - Cell Biology 2023Quote: ... mRNA-seq libraries were generated using NEB Ultra II stranded mRNA chemistry (NEBNext® Ultra™ II DNA Library Prep Kit for Illumina®), as per the manufacturers protocol with the following settings ...
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bioRxiv - Microbiology 2022Quote: ... Sequencing libraries were prepared with a plexWell™ 96 kit (seqWell) and sequenced on an Illumina MiSeq platform (Illumina, Inc., San Diego, CA) using a v3 reagent kit yielding 2 x 301 bp paired-end reads totaling 6.4 Gbp of sequence ...
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bioRxiv - Neuroscience 2022Quote: ... Library preparation was performed with 50ng of RNA using the TruSeq PolyA+ Stranded mRNA Library Prep Kit High Throughput (Illumina, RS-122-2103). Libraries were quality-checked on a Fragment Analyzer (Advanced Analytical ...
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bioRxiv - Molecular Biology 2023Quote: ... The pooled library was sequenced on a MiSeq Illumina platform via 2×150 nt paired-end sequencing using the 300 cycle v2 kit (Illumina, #MS-102-2002).
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bioRxiv - Microbiology 2023Quote: ... RNA samples with RQNs ranging from 8 to 10 were used for RNA library preparation with the TruSeq Stranded mRNA Library Prep Kit (Illumina, San Diego, CA). Briefly ...