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Citations for Covaris :
201 - 250 of 1249 citations since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cancer Biology 2024Quote: ... Flash-frozen PDX tumors were crushed using a cryoPREP Manual Dry Pulverizer (Covaris) and resuspended in SP3 buffer (100 mM HEPES ...
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bioRxiv - Cancer Biology 2024Quote: ... 0.1% Na–Deoxycholate and 0.5% N-lauroylsarcosine for 20 minutes with a duty factor of 5% (Covaris S220). All buffers contained protease inhibitors (Roche) ...
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bioRxiv - Cancer Biology 2024Quote: ... The nuclei pellet was resuspended in RIPA buffer and sonicated to a range of 300bp∼500bp with M220 focused-ultrasonicator (Covaris, USA). The sonicated chromatin was incubated with 5µg of indicated antibodies followed by A/G magnetic beads (ThermoFisher ...
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bioRxiv - Genomics 2024Quote: ... Samples were fragmented to an average size of 550 bp via sonication (Covaris ME220) and NGS libraries prepared according to the IDT xGen DNA Library Prep Kit MC UNI (Version 2 ...
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bioRxiv - Genomics 2024Quote: ... Library preparation was performed using the S220 Focused-ultrasonicator (Covaris) to shear samples to 550bp followed by a DNA purification bead cleanup with no size selection ...
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bioRxiv - Genomics 2024Quote: ... We then sheared the gDNA to approximately 20kb fragments using Covaris G-tubes (Covaris LLC., Woburn, MA, USA) at 4200 RMP for 1 minute ...
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bioRxiv - Genomics 2024Quote: ... The resulting DNA was fragmented by sonication (Covaris E220) and enriched in biotinylated fragments followed by library preparation ...
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bioRxiv - Genetics 2024Quote: ... we used focused ultrasonication (Covaris M220 instrument) followed by size selection ...
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bioRxiv - Genomics 2024Quote: ... The samples were sonicated using a Covaris E220 focused-ultrasonicator (Covaris, MA) for 10 minutes (Duty ...
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bioRxiv - Genomics 2024Quote: ... We lysed cells with lysis buffer supplemented with protease inhibitors and mechanically sheared chromatin to 200-500bp fragments (median fragment sizes 394-536 bp in all samples) in Covaris fiber pre-slit microtubes (cat. no. 520045, Covaris, Woburn, MA, USA) with a Covaris S220 sonicator (50 μl sample ...
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bioRxiv - Genomics 2024Quote: ... the enriched DNA was sheared with a Covaris M220 Focused-ultrasonicator using 50 µl reactions in microTUBE-50 AFA Fiber Screw-Cap (Covaris), using the protocol for ∼550 bp fragments ...
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bioRxiv - Genomics 2024Quote: ... and FFPE DNA were sheared with acoustics using a 96 AFA-TUBE TPX plate (PN 520291, Covaris) set at 400-500 bp.
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bioRxiv - Genomics 2024Quote: ... the DRIPed DNA sample was fragmented to an average size of about 250 base pairs (bp) with an S220 Focused-ultrasonicator (Covaris, Woburn, MA, USA). The sonicated DNA was denatured into ssDNA at 98°C for 2 min and placed on ice immediately for another 2 min ...
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bioRxiv - Genomics 2024Quote: ... coli DNA was sheared to an average size of 5-10KB using gTubes (Covaris, Woburn, MA) and concentrated using 0.6V Ampure beads (Pacific Biosciences) ...
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bioRxiv - Zoology 2024Quote: ... DNA fragments were sheared by ultrasonication with a Covaris M220 (Covaris Inc., Woburn, MA, USA), A-tailed ...
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bioRxiv - Cancer Biology 2024Quote: ... and fragmented to average size at 8 kb with g-TUBE™ (Covaris, 520079). The DNA libraries were prepared using Ligation Sequencing Kit (ON SQK-LSK110 ...
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bioRxiv - Cancer Biology 2024Quote: ... Chromatin was sonicated to an average length of 200–600 bp using an E220 focused ultrasonicator (Covaris). Supernatants containing chromatin fragments were pre-cleared with protein A agarose beads (Millipore ...
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bioRxiv - Cancer Biology 2024Quote: ... Chromatin isolated was sheared to 300 to 700 bp fragments using a bath sonicator (Covaris S200). Fragment size was confirmed by D1000 screen tape on Agilent tape station ...
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bioRxiv - Cancer Biology 2024Quote: ... and aliquoted into Covaris 1 ml vials that were sonicated in a S220 sonicator (Covaris) for 15 min at 160 W ...
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bioRxiv - Cancer Biology 2024Quote: ... in microTUBE AFA Fiber Pre-Slit Snap-Cap tubes (Covaris, 520045) with settings for 200-bp DNA shearing ...
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bioRxiv - Cancer Biology 2024Quote: ... Lysed samples were sonicated using the E220 sonicator (Covaris, 500239) in microTUBE AFA Fiber Pre-Slit Snap-Cap tubes (Covaris ...
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bioRxiv - Evolutionary Biology 2024Quote: We sheared extracted DNA using a Covaris ultrasonicator (Covaris, Inc. Woburn, MA) prepared into Illumina sequencing libraries using either the NEB Ultra II FS kit (NEB ...
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bioRxiv - Evolutionary Biology 2024Quote: ... DNA (750 ng) was sheared into fragments of approximately 200-600 bp using the Covaris E220 system (96 well format, Covaris, Inc. Woburn, MA) followed by purification of the fragmented DNA using AMPure XP beads ...
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bioRxiv - Physiology 2024Quote: ... each weighing 25 mg were cryo-fractured in muscle sample extraction solution (50% HPLC-grade methanol and 100% formic acid in a 100:1 ratio) in tissueTUBE TT1 Extra Thick tubes (520007, Covaris, Woburn, MA, USA) using a Covaris CryoPREP CP02 Cryogenic Dry Pulverization system (Covaris) ...
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bioRxiv - Physiology 2024Quote: ... using a Covaris CryoPREP CP02 Cryogenic Dry Pulverization system (Covaris). The pulverized samples were further homogenized with zirconium silicate beads (Next Advance ...
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bioRxiv - Bioengineering 2024Quote: ... The DNA was fragmented into around 200-300 bp by ultrasonicator (Covaris). Bisulfite-converted DNA was captured using EZ-96 DNA Methylation-DirectTM MagPrep (Zymo ...
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bioRxiv - Systems Biology 2024Quote: ... and fully submerged in wells prefilled with Covaris tissue lysis buffer (TLB) (Covaris, Part No. 52-284). FFPE tissue was deparaffinized by ultra-sonication in the Covaris LE220Rsc Focused-ultrasonicator at 3 mm Y-dither at 10 mm/s ...
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bioRxiv - Systems Biology 2024Quote: ... Scrolls were transferred immediately into a Covaris 96 AFA-Tube TPX Plate (Covaris, Part No. 520291) and fully submerged in wells prefilled with Covaris tissue lysis buffer (TLB ...
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bioRxiv - Genetics 2024Quote: ... The genomic DNA was sheared using M220 focused-ultrasonicator (Covaris) and end-repaired using the End-it DNA End-repair kit (Epicentre Technologies) ...
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bioRxiv - Cancer Biology 2024Quote: ... 7°C) using AFA Fiber microTube (Covaris). Sonicated samples were diluted to 2.5 mL with dilution solution (0.01% SDS ...
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bioRxiv - Cancer Biology 2024Quote: ... 100-1000 ng of genomic DNA was sheared (Covaris) and sequencing libraries were prepared using a modified KAPA Hyper Prep Kit (Kapa Biosystems) ...
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bioRxiv - Cancer Biology 2024Quote: ... Chromatin was sheared using a combination of MNase digestion and ultrasonication (Covaris) to yield predominantly mono- and di-nucleosomes for each cell line ...
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bioRxiv - Bioengineering 2024Quote: ... and sheard to average length of 500 bp using sonication (Focused-ultrasonicator, Covaris). End-repair and sequencing adaptor ligation were performed using NEBNext Ultra End Repair/dA Tailing Module (E7546S ...
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bioRxiv - Cancer Biology 2024Quote: ... or fragmented to a size of 15-25kb with a gTUBE (Covaris, 520079) centrifuged at 1,500rcf ...
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bioRxiv - Cancer Biology 2024Quote: ... sonicated at 20% amplitude for 10min at 4°C using a Covaris M220 Focused Ultrasonicator (Covaris) and centrifuged at 12,000rpm at 4°C for 30min ...
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bioRxiv - Cell Biology 2024Quote: ... Spinal cord tissue was post-fixed using cyroPREP (Covaris, Woburn, MA) in 20% sucrose overnight ...
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bioRxiv - Cell Biology 2024Quote: ... The cells were then transferred to 1 ml Covaris shearing tube (Covaris milliTUBE 1ml AFA Fiber, 520135). The cells were sonicated using Covaris sonicator (E220 evolution ...
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bioRxiv - Cancer Biology 2024Quote: DNA was sheared to an average size of 450bp by focused ultrasonication using the Covaris 644 LE220 instrument (Covaris, Woburn, Massachusetts, USA) in 120uL ...
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bioRxiv - Cell Biology 2024Quote: ... 1 μg DNA was randomly sheared to fragments less than 500 bp using an S220 ultrasonicator (Covaris), followed by end repairing and adapter ligation ...
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bioRxiv - Cell Biology 2024Quote: Nuclei isolation was performed on fixed cells using the truChIP Chromatin Shearing Kit (Covaris) according to the manufacturer’s instructions ...
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bioRxiv - Cell Biology 2024Quote: ... Fixation buffer A (truChIP Chromatin Shearing Kit, Covaris) was added to each plate ...
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bioRxiv - Cancer Biology 2024Quote: ... The resulting DNA was sheared using the Covaris LE220 (Covaris, Woburn, MA) to a fragment size of 300-500 bp in a Covaris microTUBE ...
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bioRxiv - Microbiology 2024Quote: ... genomic DNA (gDNA) was sheared using Covaris g-tubes (Covaris, Woburn, MA, USA 520079) at 6000 RPM in an Eppendorf 5424R centrifuge (Eppendorf ...
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bioRxiv - Genetics 2024Quote: ... Genomic DNA was sonicated to an average fragment size of 350 bp using a Covaris E220 instrument (Covaris, Woburn, MA). The libraries were generated using the xGen Prism library prep kit for NGS (Integrated DNA Technologies ...
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bioRxiv - Genetics 2024Quote: ... the DNA was sheared to an average size of 600 bp using a Covaris M220 (Covaris). Sequencing was done on a MiSeq apparatus using a 600 cycle v3 kit (2 x 300 ...
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bioRxiv - Cell Biology 2024Quote: ... Total extracted chromatin was sonicated in a Covaris M220 focused-ultrasonicator using snap cap microTUBEs (Covaris, 520045) (water bath set to 7 °C ...
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bioRxiv - Genomics 2024Quote: ... gDNA and tumor DNA were sheared to an average fragment length of 200bp using a Covaris ultrasonicator (Covaris, Woburn, MA).
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bioRxiv - Genetics 2024Quote: ... DNA fragmentation was performed by ultrasonication on a device from Covaris Inc ...
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bioRxiv - Genetics 2024Quote: ... The genomic DNA was sheared into 8 kb fragments with g-TUBE (Covaris, 520079). The sheared DNA was used for PCR-free nanopore sequencing library preparation using Ligation Sequencing Kit (Oxford Nanopore Technology ...
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bioRxiv - Cell Biology 2024Quote: ... After sonication with an ultrasonicator (Covaris), the libraries for RNA sequencing were generated from fragmented DNA with eight cycles of amplification using a NEB Next Ultra DNA Library Prep Kit (New England Biolabs) ...