Labshake search
Citations for Covaris :
151 - 200 of 1241 citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Plant Biology 2023Quote: ... and chromatin sonicated using the Diagenode Bioruptor (set to high intensity, 3 times 7 cyles (30sec ON / 30 sec OFF) or the S220 Focused-ultrasonicator (Covaris) for 20 min at peak power 110 W ...
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bioRxiv - Physiology 2023Quote: ... DNA samples were diluted (where applicable) and fragmented using the Covaris S220 system (Covaris, USA) using the 350 bp setting ...
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bioRxiv - Microbiology 2023Quote: ... using input DNA sheared via an ultrasonicator (Covaris; Woburn, Massachusetts, U.S.A.). The resulting library was sequenced using a HiSeq 2500 System with 2×200 bp paired-end reads ...
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Microhomology-Mediated Circular DNA Formation from Oligonucleosomal Fragments During SpermatogenesisbioRxiv - Genomics 2023Quote: ... The DNA samples were sonicated to a set size of 250 bp with an M220 Focused-ultra sonicator (Covaris, Woburn). Sequencing libraries were generated with NEBNext® UltraTM II DNA Library Prep Kit for Illumina (NEB ...
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bioRxiv - Microbiology 2023Quote: ... the phage genomic DNA was fragmented by Covaris 55 µL series Ultrasonicator ...
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bioRxiv - Systems Biology 2023Quote: Proteomic and phosphoproteomic samples were prepared using a modified version of a previously described protocol79 and employing an adapted version of the EasyPhos platform.80 WCLs were thawed and lysed using the S220 Focused-ultrasonicator (Covaris, LLC., Woburn, MA, USA). Protein concentrations were determined via bicinchoninic acid assay (BCA)-assay ...
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bioRxiv - Plant Biology 2023Quote: ... DNA extracted DNA was fragmented by sonication (S220 from Covaris) and then converted to libraries using TruSeq DNA Sample Prep Kits (Illumina ...
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bioRxiv - Cancer Biology 2023Quote: ... sonicated (Covaris ME220 ...
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bioRxiv - Cancer Biology 2023Quote: ... protease inhibitors) and transferred to the AFA tubes (12×12, Covaris, 520081). Tubes were sonicated at peak power 75 W ...
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bioRxiv - Molecular Biology 2023Quote: ... DNA was sheared with a g-tube (Covaris) we prepared the DNA for ONT long-read sequencing using the ONT ligation sequencing kit (ONT ...
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bioRxiv - Genetics 2023Quote: ... 1 µg of genomic DNA samples were fragmented using g-tubes (Covaris). Sheared DNA was purified with AMPure PB beads and was used to construct a SMRTbell library according to the PacBio library construction guidelines59 ...
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bioRxiv - Genetics 2023Quote: ... Input gDNA was fragmented by Covaris S220 or LE220 Focused-ultrasonicator to an average insert size of 350bp ...
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bioRxiv - Genomics 2023Quote: ... approximately 200 ng of DNA was fragmented by Covaris M220 to generate a mean fragment distribution of 350bp ...
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bioRxiv - Genomics 2023Quote: ... Using a gTUBE (Covaris) we sheared 10 µg of HMW DNA to an average fragment size of of 24 kb and prepared two independent non-barcoded HiFi SMRTbell libraries using SMRTbell Express Template Prep Kit 2.0 (PacBio) ...
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bioRxiv - Genomics 2023Quote: ... genomic DNA was disrupted randomly with 6 kb-20 kb fragments by g-TUBE (Covaris, Woburn, MA, USA) and sequenced by the PacBio Sequel platform ...
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bioRxiv - Molecular Biology 2023Quote: ... Nuclei were prepared using truChIP Chromatin Shearing Reagent Kit (Covaris).
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bioRxiv - Molecular Biology 2023Quote: ... 3 times 30 seconds ON/OFF sonication was carried out at high intensity (Covaris S2 Focus Ultrasonicator) to disrupt the chromatin and release nuclear proteins ...
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bioRxiv - Microbiology 2023Quote: ... Cell lysis was performed with a Tissue Homogenizer (Covaris). Subsequent tryptic digestion ...
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bioRxiv - Plant Biology 2023Quote: ... Young leaves from a single 3-week-old plant were collected for high-molecular-weight DNA extraction followed by shearing to fragments with an average size of 20 kb using g-TUBE (Covaris). The sheared DNA was then used to construct a PacBio SMRT library following the standard SMRT bell construction protocol ...
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bioRxiv - Cell Biology 2023Quote: ... 1.0 μg of genomic DNA from proband’s blood is fragmented to an average length of 140 bp using focused acoustic energy (Covaris E210). DNA fragments were subjected to exome capturing using the IDF xGen capture probe panel with an additional “spike-in” of ∼2,500 region which are total 620 kb of RefGene coding regions ...
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bioRxiv - Cancer Biology 2023Quote: ... and chromatin was isolated and fragmented by sonication (Covaris). Fragmented chromatin was loaded onto REST antibody (Millipore ...
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bioRxiv - Genomics 2023Quote: ... We cryo-pulverised the tissues into a rough powder using a cryoPREP (Covaris) automated dry pulverizer (3 impacts to an extra thick TT1 TissueTube on intensity setting 6 with immersion in liquid N2 for 10 seconds between impacts) ...
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bioRxiv - Microbiology 2023Quote: ... DNA was fragmented by sonic disruption using a Covaris S220 apparatus (Covaris). Subsequently ...
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bioRxiv - Neuroscience 2023Quote: ... fibrils were thawed and sonicated in a sonicator water bath to generate PFFs (Covaris S220 ...
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bioRxiv - Developmental Biology 2023Quote: ... Suspensions were aliquoted into S2 microfibre tubes (Covaris). Suspensions were sonicated to disperse nanoparticle electrostatic aggregates and facilitate intravenous injection through thin-bore glass capillaries ...
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bioRxiv - Developmental Biology 2023Quote: ... using an S2 water-bath sonicator (Covaris), under the following parameters ...
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bioRxiv - Genomics 2023Quote: ... 400 ng of gDNA was brought up to 50 μL volume with 1X low-EDTA TE buffer and sheared with a Covaris E220 sonicator (Covaris, Inc., Woburn, MA) to an average 200 base pare size using the following settings ...
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bioRxiv - Immunology 2023Quote: ... purified ChIP DNA was fragmented using Covaris Focused-ultrasonicator S220 (Covaris) before library preparation ...
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bioRxiv - Genetics 2023Quote: ... 1μg genomic DNA was randomly fragmented by Covaris, and then the fragments were selected by Magnetic beads to an average size of 200-400bp ...
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bioRxiv - Microbiology 2023Quote: ... tissue was first cryo-pulverized using the CP02 CryoPrep automated dry pulverizer (Covaris). Trizol (Invitrogen ...
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bioRxiv - Genomics 2023Quote: ... We fragmented input gDNA by Covaris S220 Focused-ultrasonicator to an average insert size of 350 bp ...
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bioRxiv - Genomics 2023Quote: ... DNA was fragmented by a hydrodynamic shearing system (Covaris, Massachusetts, USA) to generate 180-280 bp fragments ...
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bioRxiv - Genomics 2023Quote: ... we transferred approximately 30 mg of liver tissue from each flash-frozen specimen stock to an extra thick TT05 TissueTube and cryo-pulverised the tissues into a rough powder using a cryoPREP (Covaris) automated dry pulverizer (2 impacts on intensity setting 6 with immersion in liquid N2 for 10 seconds between impacts) ...
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bioRxiv - Developmental Biology 2023Quote: ... cDNA was fragmented with a Covaris S 220 instrument (Covaris). Libraries for RNA-Seq were prepared using a NEBNext Ultra II Directional RNA Library Prep Kit for Illumina (New England Biolabs ...
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bioRxiv - Molecular Biology 2023Quote: ... (4) DNA was sheared to a size of 300-500bp using Covaris LE220 machine (Covaris) at the conditions ...
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bioRxiv - Genomics 2023Quote: ... Samples in each batch were pulverized in four groups of 10 or 11 samples (each sample weighing between 6-9 mg) using a CP02 cryoPREP automated dry pulverizer (Covaris 500001) and resuspended in 1 mL of ice-cold PBS ...
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bioRxiv - Genomics 2023Quote: ... 12 μl of DNA was first sheared using gTUBEs (Covaris) to target 15-18 kbp fragments ...
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bioRxiv - Evolutionary Biology 2023Quote: ... 1.2 μg of DNA was sheared to target 150–200 bp by using two protocols of 400 bp and 200 bp implemented in the S220 Focused-ultrasonicator (Covaris). Sheared DNAs were purified using the MinElute PCR Purification Kit (Qiagen ...
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bioRxiv - Evolutionary Biology 2023Quote: ... DNAs were sonicated using an S220 Focused-ultrasonicator (Covaris) to target 300 bp and purified using the GeneRead Size Selection Kit (Qiagen ...
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bioRxiv - Evolutionary Biology 2023Quote: ... PacBio-HiFi libraries were prepared according to the manual “Procedure & Checklist - Preparing HiFi SMRTbell® Libraries using SMRTbell Express Template Prep Kit 2.0” with an initial DNA fragmentation by g-Tubes (Covaris) and final library size selection on BluePippin (Sage Science) ...
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bioRxiv - Genetics 2023Quote: The resuspended cells were transferred to 1 ml milliTUBE AFA Fiber (Covaris) and sonicated on M220 Focused-ultrasonicator (Covaris ...
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bioRxiv - Genetics 2023Quote: ... and sonicated on M220 Focused-ultrasonicator (Covaris) under the following SonoLab 7.2 settings ...
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bioRxiv - Cancer Biology 2023Quote: ... 131-500ng of genomic DNA was sheared using an LE220-plus Focused-ultrasonicator (Covaris catalog # 500569), and sequencing libraries were prepared using the KAPA Hyper Prep Kit (Kapa Biosystems KK8504 ...
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bioRxiv - Microbiology 2023Quote: ... Chromatin was sheared using ultrasonication (Covaris S2). A total of 2.5 µg of antibody against H3K27ac (Abcam ...
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bioRxiv - Cancer Biology 2023Quote: ... We utilized 20-50ng of cfDNA and 100ng of matched germline DNA (gDNA) that was sonicated to reduce the fragment size to 180-220bp (Covaris M220). Libraries were sequenced on the Illumina HiSeq2500 platform by the Next Generation Sequencing Facility at the University of Trento (Italy) ...
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bioRxiv - Cancer Biology 2023Quote: ... The DNA was transferred to an AFA microTUBE (Covaris 520045) and fragmented in a Covaris E220 using duty factor 10 ...
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bioRxiv - Cancer Biology 2023Quote: ... samples were sheared to 200-350 base pair fragments using the Covaris S220 Sonicator (Covaris; Woburn, MA). Subsequently ...
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bioRxiv - Cancer Biology 2023Quote: ... Genomic DNA samples were fragmented physically by Covaris (200 to 300bp). Methylated cytosine residues of initial 200ng input gDNA were converted enzymatically by Twist Bioscience’s NEBNext Enzymatic Methyl-Seq (EM-Seq) ...
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bioRxiv - Cancer Biology 2023Quote: ... Genomic DNAs were randomly broken into specific short fragments with a length of about 350 bp by Covaris ultrasonic crusher ...
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bioRxiv - Cell Biology 2023Quote: ... the embryo suspension was sonicated (Covaris S2) in 1 mL batches for 6 min (duty cycle 10% ...