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Citations for Covaris :
51 - 100 of 1249 citations since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Evolutionary Biology 2024Quote: ... DNA was sheared into 400-600 bp fragments through ultrasonication (Covaris inc.) and amplification-free Illumina libraries were prepared ...
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bioRxiv - Genomics 2024Quote: ... the genomic DNA was sheared into fragments of 10–30 kb using a g-tube device (Covaris Inc., MA, USA). A SMRTbell library for HiFi reads was prepared using the SMRTbell Prep Kit 3.0 (Pacific Bioscience ...
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bioRxiv - Immunology 2024Quote: ... the crystal size was reduced by using a focused-ultrasonicator (Covaris E220e) for 1 minute to obtain crystals <10 µm in length ...
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bioRxiv - Genetics 2024Quote: ... The resulting lysate was separated from the glass beads and 130 µl from each sample was added to an AFA Fiber Pre-Slit Snap-Cap microtube (Covaris). Chromatin was sheared in a E220 Focused-Ultrasonicator using the following conditions ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Fragmentation was performed using Covaris micro Tubes AFA Fibre with pre-slit SnapCap (6×16mm; Covaris Ltd, Brighton, UK) in a Covaris ultrasonicator (Covaris Ltd ...
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bioRxiv - Evolutionary Biology 2024Quote: ... in a Covaris ultrasonicator (Covaris Ltd, Brighton, UK) for 80 seconds (high fragmentation ...
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bioRxiv - Genomics 2024Quote: ... 120 μl of the reaction was first sonicated in split-cap tubes by Covaris E220 to obtain fragments around 300-500nt in length (Peak power-75 ...
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bioRxiv - Plant Biology 2024Quote: ... Sheared gDNA fragment distributions with a modal peak ∼18kb were produced using g-Tubes from Covaris and Blue Pippin S1 High Pass 6-10kb cassettes to remove everything under 10kb in size.
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bioRxiv - Genomics 2024Quote: ... and g-TUBEs (Covaris). HiFi libraries were constructed using a SMRTbell Express Template Prep Kit 2.0 (PacBio) ...
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bioRxiv - Genomics 2024Quote: Approximately 5 μg of HMW DNA was sheared with a g-tube (Covaris Part No. 520079) for 6 rounds of centrifugation at 1,990 × g for 2 min ...
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bioRxiv - Genomics 2024Quote: ... the high-molecular-weight genomic DNAs were sheared with a g-TUBE (Covaris, MA, USA) by centrifugation at 1,600 × g ...
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bioRxiv - Genomics 2024Quote: ... This was subjected to shearing using Adaptive Focused AcousticsTM (Covaris) with the following parameters – Duty Factor ...
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bioRxiv - Genomics 2024Quote: ... samples meeting quality standards were digested with TaqI restriction endonuclease for 20 min at 37°C and then randomly fractionated by Covaris Focused-Ultrasonicator ...
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bioRxiv - Genomics 2024Quote: ... Nuclei were then lysed in 25 μl lysis buffer and sheared in small tubes (microTUBE AFA Fiber Pre-Slit Snap-cap 6×16mm, Covaris, Cat. #520045) using an S220 instrument (Covaris) ...
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bioRxiv - Microbiology 2024Quote: ... DNA was sheared to approximately 8 kb using a g-TUBE (Covaris, Brighton, UK) and a library prepared with the SQK-MAP006 kit ...
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bioRxiv - Genomics 2024Quote: DNA extracted from dried blood spots using a chelex protocol59 was sheared to 300bp using a LE220R-plus Covaris Sonicator (Covaris, Woburn, MA). Fragment size was checked with an Agilent TapeStation 4150 (Agilent ...
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bioRxiv - Genomics 2024Quote: ... The isolated DNA was sheared into 400- to 600-bp fragments by focused ultrasonication (Covaris Inc.). Sequencing libraries were generated using a PCR-free approach (33 ...
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bioRxiv - Genomics 2024Quote: Genomic DNA of artificial samples and clinical samples were first sheared by focused ultrasonication (Covaris Inc., USA) into 200 to 300 bp fragments followed by a quality control assessment using the Invitrogen Qubit 4 Fluorometer (Invitrogen ...
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bioRxiv - Genomics 2024Quote: ... 12Lμl of DNA was first sheared using gTUBEs (Covaris) to target 15–18Lkbp fragments ...
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bioRxiv - Genomics 2024Quote: ... genomic DNA was sheared in a gTube (Covaris, Woburn, MA) for 1 min at 6,000 rpm in an Eppendorf MiniSpin plus microcentrifuge (Eppendorf ...
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bioRxiv - Cancer Biology 2024Quote: ... 300ng of DNA was used for precapture library construction and then sheared by Covaris Acoustic shearing to generate 200bp fragmentsin length ...
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bioRxiv - Physiology 2024Quote: ... transferred to a microTUBE AFA vial, and sonicated (mean power 20 W, 30 s × 4) by a ME220 focused-ultrasonicator (Covaris, USA). After centrifugation (5 min ...
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bioRxiv - Cancer Biology 2024Quote: ... The cell lysate was sonicated using an M220 Focused-ultrasonicator (Covaris) to release chromatin lengths to 400bp ...
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bioRxiv - Cancer Biology 2024Quote: ... The cell lysate was sonicated to shear DNA to an average fragment size of 400 bp by the M220 Ultrasonicator (Covaris) as previously mentioned for ChIP ...
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bioRxiv - Genomics 2024Quote: Genomic DNA (120 μl volume) was sheared to an average size of 400-500 bp by sonication using a bath sonicator (Covaris S2) in a 6 x 16 mm microTUBE AFA fiber ...
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bioRxiv - Pathology 2024Quote: ... After cells were sonicated for 2 min using a Covaris S220 ultrasonicator (Covaris), 2 μg of antibody against H3K27ac (Abcam ...
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bioRxiv - Molecular Biology 2024Quote: ... For CUT&RUN on liver tissues flash-frozen pieces of human liver biopsies were weighted (around 1 g per sample) and transferred to pre-cooled tissue TUBES TT1 (Covaris, PN 520128). Tissues were pulverized with the CP02 cryoPREP automated Dry Pulverizer from Covaris by executing one pulse at intensity level 2 followed immediately by a second pulse at intensity level 4 ...
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bioRxiv - Immunology 2024Quote: ... the truChIP Chromatin Shearing Kit (#PN520154, Covaris) was used to cross-link DNA-protein ...
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bioRxiv - Genomics 2024Quote: ... The three samples were then mechanically sheared to 300 base pairs using the M220 Focused-ultrasonicator (Covaris, 500295) and methylated lambda control DNA ...
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bioRxiv - Microbiology 2024Quote: ... Libraries were prepared by fragmenting 500 ng of genomic DNA from each sample by sonicating with Adaptive Focused Acoustics (E220 Focused Ultrasonicator, Covaris, Woburn, Massachusetts). This produced an average fragment size of 500 base pairs ...
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bioRxiv - Cancer Biology 2024Quote: ... Fragmented DNA was obtained using a SimpleChIP(R) Plus Enzymatic Chromatin IP (CST, 9005) kit and an M220-focused ultrasonicator (Covaris).
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bioRxiv - Genomics 2024Quote: ... 15 μg of HMW DNA was sheared by g-TUBE (Covaris, USA) and applied for PacBio SMRTbell library ...
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bioRxiv - Evolutionary Biology 2024Quote: ... 8°C) and Covaris microTUBE Snap-Cap tubes (Covaris 520045). Sequencing libraries were produced using the KAPA HyperPrep Kit (Roche 07137923001 ...
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bioRxiv - Genomics 2024Quote: ... HMW DNA was sheared using gTUBE (Covaris) and HiFi libraries were prepared using the SMRTbell Express Template Prep Kit 2.0 (Pacific Biosciences ...
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bioRxiv - Cancer Biology 2024Quote: ... Then the chromatin was sheared to 200 – 700 bp in Covaris Shearing Buffer with the ultrasonicator Covaris LE220 (Covaris, Woburn, MA).
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bioRxiv - Cancer Biology 2024Quote: ... After shearing of cDNA by Covaris ultrasound water bath sonicator and purification by Ampure beads (Beckman Coulter ...
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bioRxiv - Cancer Biology 2024Quote: ... and 5% duty cycle in the S220 Focused Ultrasonicator (Covaris). Under this condition ...
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bioRxiv - Evolutionary Biology 2024Quote: ... we sheared the gross genomic DNA by g-TUBEs (Covaris, USA) and prepared SMRTbell libraries with an average insert-size of 14.85 kb according to the standard PacBio protocols (Pacific Biosciences ...
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bioRxiv - Genomics 2024Quote: ... 1.2 µg of gDNA was sonicated into ∼200 bp fragments using the S220 focused ultrasonicator (Covaris). To maximize IP yield for hMeDIP-seq ...
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bioRxiv - Genomics 2024Quote: ... ∼2.5ug of DNA in a volume of 130 µL was sheared to ∼800bp using a S220 focused ultrasonicator (Covaris) and the following parameters ...
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bioRxiv - Genomics 2024Quote: ... 5-10 mg of snap-frozen tissue was placed into a tissueTUBE-TT05 (Covaris 520071) and cryopulverized using the Covaris CP02 cryoPREP Automated Dry Pulverizer ...
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bioRxiv - Neuroscience 2024Quote: We used the dry pulverizer Cryoprep (Covaris) for pulverization of tissue blocs ...
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bioRxiv - Developmental Biology 2024Quote: ... Chromatin was sheared in the S220 Focused Ultrasonicator (Covaris) with silia beads and immunoprecipitation was performed with an antibody to H3K4me3 (Cell Signaling #9751) ...
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bioRxiv - Evolutionary Biology 2024Quote: ... 250 ng of genomic DNA extracted from an adult individual fished in Roscoff (France; sex unknown) were sonicated using the S2 Covaris instrument (Covaris, Inc., USA). Sheared DNA was used for Illumina library preparation by a semi-automatized protocol ...
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bioRxiv - Evolutionary Biology 2024Quote: ... and sheared through Covaris M220 (Covaris, Woburn, MA, USA) and Qsonica Q800R sonicators ...
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bioRxiv - Genetics 2024Quote: ... Frozen livers were pulverised with the cryoPREP® Automated Dry Pulverizer (Covaris #CP02) using the TT2 holder ...
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bioRxiv - Genomics 2024Quote: ... The genomic DNA sample was first sheared with g-TUBEs (Covaris, USA) according to the expected size of the fragments for the library ...
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bioRxiv - Genomics 2024Quote: ... 1 μg of genomic DNA was randomly fragmented by Covaris. The fragmented DNA was selected to an average size of 200-400 bp using MGIEasy DNA Clean Beads (CAT#1000005279 ...
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bioRxiv - Genomics 2024Quote: ... the g-Tube (Covaris, Woburn, MA, USA) was used to shear 3 µg of nuclear genomic DNA by centrifuging at 2,000x g for 1 min to get DNA fragments with mean size of 13 to 15 kb ...
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bioRxiv - Plant Biology 2024Quote: ... 1.5 μg of genomic DNA was sonicated to a 100–1500-bp size range using a Covaris E220 sonicator (Covaris). The fragments (1µg ...