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Citations for Illumina :
301 - 350 of 1318 citations for 6β Fluoro 21 hydroxypregna 1 4 9 11 16 tetraene 3 20 dione 21 acetate since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Molecular Biology 2023Quote: ... and each sample was sequenced in 3 different lanes (3 technical replicates per sample) on an Illumina HiSeq platform (Illumina, USA).
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bioRxiv - Microbiology 2022Quote: ... spiked with 20 % PhiX pre-made library from Illumina, and loaded on a MiSeq v3 kit ...
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bioRxiv - Cell Biology 2023Quote: ... spiked with 20% PhiX pre-made library from Illumina and loaded on a MiSeq v3 kit ...
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bioRxiv - Cancer Biology 2023Quote: ... pre-treatment and post-treatment/acquired resistant biopsies were obtained from patients receiving various immune checkpoint inhibitor treatments (PD-L1, PD-1, CTLA-4 targeted therapies) for RNA-seq analysis (Illumina HiSeq2500) from formalin fix paraffin embedded samples ...
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bioRxiv - Systems Biology 2021Quote: ... Libraries were then pooled in groups of 4 and sequenced on 4 lanes on a NextSeq500 sequencer (Illumina) using 10X Genomics recommended reads configuration.
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bioRxiv - Neuroscience 2021Quote: To analyze the potency of our guide library we established a targeted genomic sequencing approach similar to the 16S metagenomic sequencing library preparation protocol (Illumina #15044223). In short ...
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bioRxiv - Microbiology 2021Quote: ... 16S amplicon libraries were prepared by addition of Nextera XT Index Kit v2 Set A adapter sequences (Illumina, San Diego, CA) which were cleaned using KAPA Pure Beads (Roche ...
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bioRxiv - Zoology 2022Quote: ... to construct the 16S gene library for high-throughput sequencing on the Miseq platform according to the standard protocol (Illumina, USA) by Sangon Biotech (Shanghai ...
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bioRxiv - Genetics 2019Quote: ... The final pool of balanced libraries was loaded over an additional 16 lanes of the Illumina HiSeqX (Illumina, San Diego, CA). 2x150 paired-end sequence data was generated ...
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bioRxiv - Microbiology 2022Quote: ... PCR reactions were then prepared into amplicon libraries for sequencing following an adapted version of the Illumina 16S Metagenomic Sequencing Library Preparation protocol (Illumina Inc.). Libraries were quantified using the Qubit dsDNA HS Assay kit on a Qubit 2.0 fluorometer (ThermoFisher Scientific) ...
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bioRxiv - Microbiology 2022Quote: ... The first stage PCRs for Illumina Next Generation Sequencing (NGS) were performed in-house according to the ‘16S Metagenomic Sequencing Library Preparation’ instructions for the Illumina MiSeq system (Illumina, Australia). Conventional PCR assays were carried out with Q5 Hot Start High-Fidelity 2× Master Mix (New England Biolabs ...
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bioRxiv - Neuroscience 2021Quote: ... using TruSeq SR Cluster Kit 3-cBot-HS (Illumina) and TruSeq SBS Kit 3-HS (Illumina ...
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bioRxiv - Microbiology 2023Quote: ... 2 μl of the v1.5 sRNA 3’ adapter (Illumina) was mixed with the 14 μl eluate of the previous step in a 200 μl nuclease-free ...
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bioRxiv - Immunology 2024Quote: ... 3 biological replicates were sequenced with NextsSeq 550 (Illumina). For data analysis ...
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bioRxiv - Genomics 2019Quote: ... 500bp and 800bp) and long insert mate-pair reads (4-6Kb, 8-10Kb and 1-20Kb) were sequenced using HiSeq 2500 (Illumina Inc., USA) at SciGenom Labs ...
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bioRxiv - Microbiology 2019Quote: Tag-encoded 16S rRNA gene amplicon sequencing was performed on an Illumina NextSeq using v2 MID output 2×150 cycles chemistry (Illumina, CA, USA). DNA extraction and library building for amplicon sequencing was performed in accordance with Krych et al.[19] ...
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bioRxiv - Microbiology 2022Quote: ... Bacterial 16S rRNA V4 region was amplified during library preparation via Illumina’s Nextera XT Index Kit v2 (Illumina, Inc.; San Diego, CA) (primers ...
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bioRxiv - Microbiology 2020Quote: ... Samples were normalized to 1.67 × 105 16S rRNA gene copies/μL prior to barcoding and Illumina MiSeq sequencing (reagent kit v3; Illumina, San Diego, CA) at the University of Minnesota Genomics Center (Minneapolis ...
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bioRxiv - Microbiology 2022Quote: ... The library preparation and sequencing was performed by the Host Microbe Systems Biology Core at UC Davis using primer pair 341F and 806R in 300 bp paired-end run for the V3-V4 hypervariable regions of the 16S rRNA on an Illumina MiSeq (Illumina, San Diego). The 16S rRNA Raw FASTQ sequence files were deposited and processed in QIITA (36 ...
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bioRxiv - Genomics 2019Quote: Amplicons of the 16S rRNA gene were sequenced through Illumina MiSeq 2×250 paired-end technology (Illumina®, San Diego, California, USA) at the Unidad de Secuenciación Masiva of the UNAM Biotechnology Institute (Cuernavaca ...
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bioRxiv - Microbiology 2019Quote: Tag-encoded 16S rRNA gene amplicon sequencing was performed on a Illumina NextSeq using v2 MID output 2×150 cycles chemistry (Illumina, CA, USA). DNA extraction and library building for amplicon sequencing was performed in accordance to Krych et al ...
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bioRxiv - Microbiology 2022Quote: The V3–V4 region of the 16S rRNA amplicons was subjected to high-throughput sequencing using a MiSeq system (Illumina, United States) and MiSeq Reagent Kit v2 (500 cycles ...
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Genomic local adaptation of a generalist plant species to pollinator communities and abiotic factorsbioRxiv - Plant Biology 2022Quote: ... with 16 threads of freebayes running in parallel across regions of 100kb in the de novo polished genome assembly (PacBio, Illumina and Bionano). Single nucleotide polymorphisms (SNPs ...
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bioRxiv - Pathology 2023Quote: Genomic DNA from snap-frozen fecal samples and the amplification of hypervariable V3-V4 regions of their 16S rRNA gene were prepared as described previously.[34] Libraries preparation and sequencing (Illumina Miseq cartridge) were performed by the Genotoul facility (Get-Biopuces ...
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bioRxiv - Microbiology 2023Quote: ... The microbial community of each sample was analyzed by 16S rRNA gene amplicon sequencing of the V4-V5 hypervariable region (Illumina MiSeq platform) (Illumina Inc. ...
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bioRxiv - Microbiology 2024Quote: ... The RNA was treated with the QIAseq FastSelect 5S/16S/23S rRNA removal kit prior to library prep with the TruSeq Stranded Total RNA Library Prep Kit (Illumina, CA, USA). The Illumina HISeq 4000 was used for sequencing at 50bp single-end reads.
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bioRxiv - Microbiology 2024Quote: ... The 16S rRNA amplicons and ITS amplicons were pooled separately and sequenced using the Illumina MiSeq instrument (Illumina, San Diego, CA, USA). The raw sequences were quality filtered using the Quantitative Insights into Microbial Ecology pipeline (QIIME v1.9) ...
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bioRxiv - Microbiology 2023Quote: ... The V3-V4 region of the 16S ribosomal RNA gene was amplified by PCR with universal bacterial primer sets (5’-TCGTCGGCAGCGTCAGATGTGTATAAGAGACAGCCTACGGGNGGCWGCAG-3’ and 5’-GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAGGACTACHVGGGTATCTAATCC-3’) and was sequenced using MiSeq Reagent kit v3 (600 cycle) (Illumina Inc., California, US). The sequence data were analyzed using QIIME2 (https://qiime2.org/ ...
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bioRxiv - Developmental Biology 2024Quote: ... library construction was immediately carried out using a Chromium Single Cell 3’ Reagent Kit (Version 3) and sequenced on an Illumina HiSeq 4000 or an Illumina NextSeq2000 (Illumina, cat no. 20040559) by the Technion Medicine Faculty Azrieli-Technion Genomics Center ...
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bioRxiv - Developmental Biology 2019Quote: ... or 6 bp (Nextera Index Read 1 Primer/i7) additional base pairs to the 3’ ends of standard Nextera primer sequences [100] (Illumina Inc., San Diego, California). Although we have not confirmed this directly ...
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bioRxiv - Molecular Biology 2019Quote: ... 48 μL of 20 pM PhiX DNA (Illumina, San Diego) and 360 μL of HT1 buffer were added to 192 μL of the 20 pM library to obtain an 8 pM library ...
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bioRxiv - Cell Biology 2020Quote: ... with a spike-in of 20% phiX gDNA library (Illumina). Raw reads were trimmed from technical sequences (adapter and cassette sequences ...
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bioRxiv - Genomics 2020Quote: ... and SNPs with poor sequence quality (Illumina phred score < 20) were removed ...
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bioRxiv - Cancer Biology 2022Quote: ... libraries were spiked with 20% PhiX Control v3 (Illumina 1501766) then run using the NovaSeq Illumina sequencing platform by the Johns Hopkins Microarray and Deep Sequencing Core ...
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bioRxiv - Microbiology 2021Quote: ... UK). Libraries were prepared from 8 samples (4× T. brucei, 4× T. congolense) using the TruSeq Stranded mRNA kit (Illumina) and 2 × 75 bp paired-end sequencing was carried out using a HiSeq 4000 system (Illumina) ...
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bioRxiv - Cancer Biology 2021Quote: ... Barcoded libraries of ten samples (4 treated, 4 untreated and two controls) were equimolarly pooled and sequenced on MiSeq (Illumina) using MiSeq v3 150 reagent kit (MS-102-3001 ...
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bioRxiv - Microbiology 2019Quote: ... and the primers V3F - 5’-CCTACGGGNGGCWGCAG-3’ and V4R – 5’-GACTACHVGGGTATCTAATCC-3’ [28] with the addition of the appropriate Illumina Nextera XT overhang adapter sequences (Illumina, San Diego, CA, USA). Following purification using a magnetic bead capture kit (Ampure ...
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bioRxiv - Genomics 2019Quote: ... and 4 μL TDE1 (tagment DNA enzyme, Illumina). 0.1% SDS treatment then denatured the enzyme and 1:1 SPRI followed by elution in TE buffer was used to remove SDS ...
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bioRxiv - Genomics 2023Quote: ... 4 washes with PR2 buffer (PR2, Illumina MiSeq), and 6 minute incubation at 60°C with shaking followed by 4 washes was performed a total of 3 times ...
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bioRxiv - Molecular Biology 2019Quote: ... and 3’ end adenylation per the TruSeq protocol (Illumina, Inc.), libraries were constructed using an Apollo 324 automated library system ...
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bioRxiv - Molecular Biology 2019Quote: ... v1.5 small RNA 3’ adaptor kit (Illumina FC-102-1009) or by using TruSeq directional small RNA kit (Illumina RS-200-0012) ...
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bioRxiv - Genomics 2019Quote: ... the sequence 3’ of the indices were bound by Illumina’s Sequencing Primers ...
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bioRxiv - Plant Biology 2023Quote: ... with the MiSeq reagent kit version 3 (600 cycles; Illumina). The reads were cleaned up using the cutadapt ver ...
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bioRxiv - Microbiology 2021Quote: ... Each pool of V4-V5 16S rRNA amplicons was sequenced (2×300nt paired end) on one lane of a MiSeq V2 sequencer (Illumina, San Diego, CA) at the Carver Biotechnology Center of the University of Illinois ...
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bioRxiv - Microbiology 2022Quote: The V4 region of the 16S rRNA gene was amplified from extracted fecal DNA and sequenced on a MiSeq (Illumina, San Diego, CA) using 2 x 250 V2 chemistry following the MiSeq Wet Lab SOP [(22) ...
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bioRxiv - Molecular Biology 2020Quote: ... Sequencing of the 16S rRNA gene amplicons was conducted on the Illumina Mi-Seq DNA sequencing platform (Illumina Inc., San Diego, CA, U.S.A.). Amplicon sequence data was analyzed using an internal pipeline known as the Amplicon Sequencing Analysis Pipeline (Zhang et al. ...
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bioRxiv - Microbiology 2022Quote: ... a sequencing library of the V3-V4 region of the 16S rRNA gene was constructed following the manufacturer’s instructions (Part # 15044223Rev.B; Illumina Inc., San Diego, CA, USA) with improvement as previously described [20] ...
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bioRxiv - Microbiology 2022Quote: ... A sequencing library of the V3-V4 region of the 16S rRNA gene was constructed following the manufacturer’s instructions (Part # 15044223Rev.B; Illumina Inc., San Diego, CA, USA) with improvement as previously described [20] ...
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bioRxiv - Microbiology 2022Quote: ... Microbial composition of intestinal biopsies was determined by Illumina MiSeq paired-end sequencing of the V3-V4 hypervariable region of the 16S rRNA gene (MiSeq Benchtop Sequencer, Illumina Inc., San Diego, USA). Amplification of bacterial DNA was performed by PCR using modified 341F and 806R primers with a six-nucleotide barcode on the 806R primer for multiplexing [101 ...
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bioRxiv - Microbiology 2020Quote: ... the V3–V4 region of bacterial 16S rRNA genes was sequenced using primers 341F-806R [25] with MiSeq technology (Illumina, San Diego, CA). Internal company standards worked as expected (Supplementary Methods) ...