Labshake search
Citations for Illumina :
4551 - 4600 of 5691 citations for TD 5108 CAS 866933 46 2 99% since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Plant Biology 2023Quote: ... The final library was sequenced using a 2 × 150 bp paired-end protocol on the NovaSeq 6000 system (Illumina).
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bioRxiv - Microbiology 2023Quote: Viral enrichment was performed using the Illumina RNA Prep with the Respiratory Viral Oligo Panel version 2 (RVOP) (Illumina Inc ...
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bioRxiv - Genetics 2023Quote: ... Paired-end sequencing (2 × 150 bases) of these amplicons was performed using iSeq 100 i1 Reagent v2 (#20031371; Illumina) and iSeq 100 (Illumina).
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bioRxiv - Cancer Biology 2023Quote: ... and sequencing was carried out with a NovaSeq 6000 SP 2×100bp FlowCell plus PhiX spike-in (Illumina, US), outputting ∼25M read pairs/sample ...
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bioRxiv - Molecular Biology 2023Quote: ... Ligated fragments were amplified using the Phusion enzyme Library pools were sequenced on the HiSeq 2000 (2×75bp) (Illumina) at the CNAG ...
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bioRxiv - Immunology 2024Quote: ... The sequencing run was performed using Illumina NovaSeq 6000 SP v1.5 (650-800 M reads/run, 2 lanes; Illumina) in the Finnish Functional Genome Centre (Turku Bioscience Center ...
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bioRxiv - Microbiology 2024Quote: ... 2 µl of isolated genomic DNA sample and 100 nmol of each primer (WISH_Illumina_fwd and WISH_Illumina_rev, see Table S11) were used in a DreamTaq MasterMix (Thermo Fisher Scientific) ...
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bioRxiv - Microbiology 2024Quote: ... 2 µl of isolated genomic DNA sample and 100 nmol of each primer (WISH_Illumina_fwd and WISH_Illumina_rev, see Table S6) were used in a DreamTaq MasterMix (Thermo Fisher Scientific) ...
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bioRxiv - Immunology 2024Quote: ... quantitated by qPCR and sequenced on 2 10B lanes with 28 x 150 nucleotide reads on a NovaSeq X Plus with V1.0 sequencing kits (Illumina). The samples each yielded 350-450 million paired reads.
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bioRxiv - Microbiology 2024Quote: ... The amplicon libraries were paired-end sequenced (2 × 300 bp) on the Illumina MiSeq using v3 chemistry (Illumina, USA). 10 to 20% PhiX control library was added to mitigate low diversity library effects.
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bioRxiv - Cancer Biology 2024Quote: ... sample libraries were sequenced to a target coverage of 0.5x using paired-end 2×100bp reads on a NovaSeq 6000 (Illumina). Sequencing libraries were deconvoluted using bcl2fastq ...
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bioRxiv - Microbiology 2024Quote: ... sequenced (251bp x 2) using the MiSeq benchtop sequencer and a 500 cycle V2 reagent kit (Illumina Inc., USA).
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bioRxiv - Developmental Biology 2024Quote: ... Libraries were generated from day 2 RNA using the TruSeq RNA Library Prep Kit v2 (Illumina RS-122-2001) and day 3 RNA using the TruSeq Stranded mRNA Library Prep Kit (Illumina 20020594 ...
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bioRxiv - Immunology 2024Quote: ... on a NextSeq 500 using the NextSeq 500/550 High Output Kit V.2 according to the manufacturer’s instructions (Illumina). For each sample ...
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bioRxiv - Genomics 2024Quote: ... RNA-seq libraries were clustered and sequenced at 2×150 bp on a NovaSeq 6000 System using the NovaSeq 6000 S4 Reagent Kit v1.5 (300 cycles; Illumina).
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bioRxiv - Genomics 2024Quote: ... RNA-seq libraries were clustered and sequenced at 2×150 bp on a NovaSeq 6000 System using the NovaSeq 6000 S4 Reagent Kit v1.5 (300 cycles; Illumina).
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bioRxiv - Genomics 2024Quote: ... RNA-seq libraries were clustered and sequenced at 2×150 bp on a NovaSeq 6000 System using the NovaSeq 6000 S4 Reagent Kit v1.5 (300 cycles; Illumina).
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bioRxiv - Genomics 2024Quote: ... RNA-seq libraries were clustered and sequenced at 2×150 bp on a NovaSeq 6000 System using the NovaSeq 6000 S4 Reagent Kit v1.5 (300 cycles; Illumina).
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bioRxiv - Cell Biology 2024Quote: ... After 2-3 passages in complete DMEM with 10% FBS gDNA was extracted to confirm the genotype by Illumina amplicon sequencing and live cell microscopy was performed.
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bioRxiv - Plant Biology 2020Quote: ... A second round of PCR was used to add the dual indices with the Nextra XT Index Kit (Illumina, San Diego, CA, USA). The quality of these sequencing libraries was determined by the Qubit® 2.0 Fluorometer ...
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bioRxiv - Cancer Biology 2021Quote: ... were subjected to the transcriptome sequencing by Beijing Genomics Institute (BGI, Shenzhen, China) on an Illumina HiSeq 2000 sequencing system (Illumina, San Diego, CA). All detected mRNAs were fragmented into short fragments (~200bp) ...
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bioRxiv - Developmental Biology 2021Quote: ... 500 ng of total RNA from each sample was used for the RNA-seq library preparation using the TruSeq stranded mRNA kit (Illumina, San Diego, CA) following the manufacturer’s instructions ...
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bioRxiv - Cell Biology 2020Quote: ... were prepared from HepG2 cell samples using 200–500 ng of total RNA following the manufacturer’s instructions for the TruSeq RNA kit (Illumina, San Diego, CA, USA). With this kit ...
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bioRxiv - Developmental Biology 2021Quote: ... Libraries were prepared starting from 1000 ng of total RNA using the RNA Sample Prep Kit v2 (Illumina Inc, San Diego, CA, USA) including a poly-A selection step following the manufacturer’s instructions and sequenced as 2 x 100 nt paired-end reads using an Illumina HiSeq 2500 ...
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bioRxiv - Microbiology 2020Quote: ... Library construction and sequencing were conducted using the Illumina Nextera NGS Library Prep Kit or the Illumina Nextera XT DNA Library Prep Kit (Illumina, San Diego, CA). Libraries were sequenced on an Illumina NextSeq with 150bp paired-end reads ...
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bioRxiv - Genetics 2021Quote: Participants in the South African Zulu study were genotyped using the Illumina Multi-Ethnic Genotyping Array (Illumina, Illumina Way, San Diego, CA, USA). The Affymetrix Axiom PANAFR SNP array or Illumina Multi-Ethnic Genotyping Array was used to genotype participants in the AADM study ...
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bioRxiv - Genetics 2021Quote: Participants in the South African Zulu study were genotyped using the Illumina Multi-Ethnic Genotyping Array (Illumina, Illumina Way, San Diego, CA, USA). The Affymetrix Axiom PANAFR SNP array or Illumina Multi-Ethnic Genotyping Array was used to genotype participants in the AADM study ...
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bioRxiv - Developmental Biology 2021Quote: ... RNA-seq libraries were generated using Illumina SureCell WTA 3’ Library Prep Kit for the ddSEQ System (6 cartridge version, cat.no. 20014280, Illumina, San Diego, CA, USA). Libraries were assessed for quality ...
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bioRxiv - Evolutionary Biology 2020Quote: ... was isolated by magnetic bead and converted into RNA libraries using the Illumina TruSeq RNA Library preparation kit v2 according to the manufacturer’s instructions (Illumina, San Diego, CA, USA). Libraries were sequenced on a HiSeq 2100 ...
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bioRxiv - Developmental Biology 2020Quote: ... A total amount of 3μg RNA per sample was used for mRNA purification and library construction via the Truseq™ RNA Sample Prep Kit (Illumina, CA, USA) followed the manufacturer’s instructions ...
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bioRxiv - Developmental Biology 2020Quote: ... libraries were prepared from 1 ng of cDNA using the Nextera® XT DNA Library Preparation Kit (Illumina Inc., San Diego, CA USA) according to the manufacturer’s instructions ...
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bioRxiv - Developmental Biology 2020Quote: ... 500 ng of total RNA was used for each RNA-seq library preparation using a TruSeq Standard mRNA kit (Illumina, San Diego, CA) as described in our previous publications (Khristi et al. ...
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bioRxiv - Developmental Biology 2021Quote: ... This nuclear pellet was used to prepare ATAC-seq libraries using the Nextera DNA Library Preparation Kit (Illumina, San Diego, CA, Cat #FC1211030). The pellet was suspended in 5 μL buffer TD before adding 2.5 μL water and 2.5 μL tagment DNA enzyme ...
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bioRxiv - Genomics 2020Quote: ... Deep- and shallow-sequence libraries were pooled separately and sequenced on either Illumina HiSeq 2500 or HiSeq 4000 (Table S1, Illumina, San Diego, CA).
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Host transcriptomic profiling of COVID-19 patients with mild, moderate, and severe clinical outcomesbioRxiv - Genomics 2020Quote: ... RNA libraries were then prepared for shotgun transcriptome sequencing using the TruSeq Stranded Total RNA Library kit from Illumina (San Diego, CA, USA) as previously described.12,13,14 Libraries were then sequenced using the NovaSeq SP Reagent kit (2 × 150 cycles ...
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bioRxiv - Genomics 2020Quote: ... The remaining 74 paired-end short insert (350 nt) sequencing libraries were constructed using 100 ng sample DNA and the TruSeq DNA Nano kit (Illumina, San Diego, CA) with coverage between 8-40x (Kitchen et al ...
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bioRxiv - Cell Biology 2022Quote: ... The RNA samples were sent to the JHMI Transcriptomics and Deep Sequencing Core and quantified by deep sequencing with the Illumina NextSeq 500 platform (Illumina, San Diego, CA). Data analyses were performed using software packages including Partek Genomics Suite ...
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bioRxiv - Genomics 2022Quote: ... One ng of the pooled amplicons was used for library construction with the Nextera XT DNA library preparation kit (#FC-131–1096; Illumina, San Diego, CA), according to the manufacturer’s instructions ...
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bioRxiv - Molecular Biology 2020Quote: ... Oxford Nanopore Technologies’ Direct RNA sequencing (DRS) libraries were constructed as follows: intracellular RNA was immediately ribo-depleted using Ribo-Zero kits (Illumina, San Diego, CA) upon RNA extraction and used within 24 hours of ribodepletion (stored on ice) ...
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bioRxiv - Molecular Biology 2020Quote: ... RT-qPCR gene expression quantifications were performed using AceQ qPCR SYBR Green Mix (Vazyme Biotech) on Eco Real-Time PCR System (Illumina, San Diego, CA). RNA expression was normalized to a geometric mean of two reference genes ...
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bioRxiv - Molecular Biology 2021Quote: ... DNA quality control was performed in a fragment analyzer and sequencing libraries were constructed using a Nextera DNA Flex kit (now renamed to Illumina DNA Prep, Illumina, San Diego, CA) and 2×150 BP paired-end sequencing was performed in an Illumina NextSeq500 ...
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bioRxiv - Cell Biology 2022Quote: ... Then libraries with different indices were multiplexed and loaded on an Illumina Novaseq instrument according to manufacturer’s instructions (Illumina, San Diego, CA, USA). Sequencing was carried out using a 2×150 paired-end (PE ...
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bioRxiv - Evolutionary Biology 2022Quote: Genomic DNA was extracted from Bergerac and N2 control lines as previously described (Konrad et al. 2018) with libraries prepared using the Nextera DNAflex library kit (Illumina, San Diego, CA). Libraries were sequenced on the Illumina Novaseq6000 platform (2×150 bp ...
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bioRxiv - Genomics 2020Quote: 54 samples were sequenced on two Illumina HiSeq 4000 lanes using 150 bp paired-end chemistry with 300 cycles (Illumina, San Diego, CA). All remaining samples were sequenced on three Illumina NovaSeq lanes using S4 150 bp paired-end chemistry with 300 cycles ...
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bioRxiv - Genomics 2020Quote: ... The 300 ng gDNA of all four samples were used to prepare paired-end libraries with the Nextera ™ DNA Flex Library Preparation kit with an average insert size of 600 bp for all four samples according to the manufacturer’s instructions (Illumina Inc., San Diego, CA).
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bioRxiv - Genomics 2020Quote: ... and libraries were constructed by the Lexogen QuantSeq 3’ mRNA-Seq Library Kit FWD (Lexogen, Vienna, Austria).19 All RNA libraries were sequenced by the Illumina HiSeq4000 (Illumina, San Diego, CA). Raw sequencing data were aligned to the reference genome (GRCh37 ...
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bioRxiv - Molecular Biology 2021Quote: ... The library was prepared with PCR products pooled in equimolar amounts following the manufacture’s protocol and loaded in a Micro MiSeq Reagent Kit v2 (500-cycles) (Illumina, San Diego, CA, USA) on a MiSeq platform (Illumina) ...
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bioRxiv - Genetics 2020Quote: ... 5 males and 1 female) were used to perform library preparation and sequencing (100 bp single-end) on the HiSeq 4000 sequencer (Illumina, San Diego, CA) following the manufacturer’s sequencing protocols ...
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bioRxiv - Genetics 2020Quote: ... was then used to perform exome capture and library preparations The library were then sequenced using a NovaSeq 6000 System (Illumina, San Diego, CA) with 150 base-pair reads and output data up to 10 Gb per sample ...
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bioRxiv - Genomics 2020Quote: ... These libraries were then sequenced for 150nt from each side of the DNA fragments (paired-reads) on a NovaSeq 6000 (Illumina, San Diego, CA) one lane of an S2 flowcell.