Labshake search
Citations for Illumina :
4551 - 4600 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Molecular Biology 2023Quote: ... Accuracy metrics on the new HIV-PULSE assay compared to FLIPS and STIP-Seq reference proviruses (sequenced using Illumina technology) were calculated using pomoxis (v0.3.6 ...
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bioRxiv - Molecular Biology 2023Quote: ... rRNAs were depleted with the Ribo-Zero Gold rRNA Removal Kit (Human/Mouse/Rat) (Illumina) for human and mouse samples and with Caenorhabditis elegans Ribo-Seq riboPOOLs (siTOOLs Biotech ...
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bioRxiv - Molecular Biology 2023Quote: ... The pooled library was sequenced on a MiSeq Illumina platform via 2×150 nt paired-end sequencing using the 300 cycle v2 kit (Illumina, #MS-102-2002).
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bioRxiv - Molecular Biology 2023Quote: ... rRNA-depleted by a Ribo-Zero Gold rRNA Removal Kit (Human/Mouse/Rat) (Illumina), and reverse transcribed by ProtoScript II Reverse Transcriptase (New England Biolabs) ...
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bioRxiv - Molecular Biology 2023Quote: ... Deep sequencing (Hiseq4000, Illumina) was conducted by the high throughput genomics team of the Wellcome Trust Centre for Human Genetics (WTCHG) ...
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bioRxiv - Molecular Biology 2023Quote: DNA libraries were sequenced on HiSeq X (Illumina) with a paired-end 150-bp option.
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bioRxiv - Molecular Biology 2023Quote: ... RNA libraries were prepared according to manual of Truseq small RNA library prep kit (Illumina). Deep sequencing (Hiseq4000 ...
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bioRxiv - Molecular Biology 2023Quote: ... The other RNA-Seq libraries were generated by a TruSeq Stranded mRNA Library Prep kit (Illumina). The DNA libraries were sequenced on a HiSeq 4000 with 50-bp single-read mode (s-µg experiments ...
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bioRxiv - Molecular Biology 2023Quote: ... with indexing of 96-samples per run according to the manufacturer’s instructions (Illumina, #FC-131-2001), except that input and reagents volumes were halved and libraries were normalized manually ...
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bioRxiv - Molecular Biology 2023Quote: ... libraries were pooled and sequenced on NovaSeq S4 2×150-bp run (Illumina). Mapping to the human hg38 genome and peak calling were performed using the ENCODE ATAC-seq pipeline.
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bioRxiv - Molecular Biology 2023Quote: ... DNA libraries were sequenced on HiSeq 4000 (Illumina) with a single-end 50 bp option.
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bioRxiv - Molecular Biology 2023Quote: ... Samples were treated by RiboZero (Illumina) or Ribominus (Thermo Scientific ...
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bioRxiv - Molecular Biology 2023Quote: ... rRNA removal reagents and libraries were prepared using TruSeq Stranded mRNA kit (Illumina). We strictly followed the protocol except that we started directly at the fragmentation step after the rRNA removal step and we adjusted the number of cycle required to amplify libraries ...
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bioRxiv - Microbiology 2023Quote: ... Eighteen pM libraries were clustered in a high-output flow cell using HiSeq Cluster Kit v4 on a cBot (Illumina). After cluster generation ...
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bioRxiv - Microbiology 2023Quote: ... RNA samples with RQNs ranging from 8 to 10 were used for RNA library preparation with the TruSeq Stranded mRNA Library Prep Kit (Illumina, San Diego, CA). Briefly ...
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bioRxiv - Microbiology 2023Quote: ... and then sequenced with the MiSeq platform using a MiSeq Reagent Kit v3 (2×300 bp paired-end) (Illumina), yielding 3,272,078 paired-end reads ...
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bioRxiv - Microbiology 2023Quote: ... using the HiSeq2500 platform (Illumina) for 56 bps single-end sequencing ...
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bioRxiv - Microbiology 2023Quote: ... The sequence library was prepared with Nextera Mate Pair Sample Prep Kit (Illumina) according to the manufacture’s protocol ...
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bioRxiv - Microbiology 2023Quote: ... the flow cell was loaded onto HiSeq 2500 for sequencing using HiSeq SBS kit v4 (Illumina). DNA was sequenced from both ends (paired-end ...
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bioRxiv - Molecular Biology 2023Quote: ... the resulting library was run on a Miniseq sequencer (Illumina, USA), using the MiniSeq High Output Reagent Kit (150-cycles).
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bioRxiv - Microbiology 2023Quote: Whole-genome sequencing for strains AKK101 and 3336 was performed by the Virginia Commonwealth University Genomics Core using the MiSeq platform (Illumina, San Diego, CA, USA) after the construction of a paired-end sequencing library using the Illumina Nextera XT DNA sample preparation kit (Illumina ...
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bioRxiv - Microbiology 2023Quote: ... Libraries were constructed using the TruSeq Nano library kit (Illumina, Inc., San Diego, CA, USA) and shotgun sequencing was performed in four runs using an Illumina HiSeq 2500 ...
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bioRxiv - Microbiology 2023Quote: ... according to the manufacturer’s instructions (Illumina, San Diego, CA, USA). Sequencing was carried out using a 2 × 150 paired-end (PE ...
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bioRxiv - Microbiology 2023Quote: ... Genomic DNA libraries were prepared for whole genome sequencing using the Tagmentation-based library prep kit according to the manufacturer’s instructions (Illumina Inc, San Diego, CA, USA). Next ...
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bioRxiv - Molecular Biology 2023Quote: ... 2.5µL TDE1 Tagment DNA Enzyme (Illumina) was added to each well (final volume = 50µL) ...
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bioRxiv - Molecular Biology 2023Quote: ... BCL files from Illumina sequencing were first converted to fastq files with bcl2fastq v2.16 (Illumina). Reads were filtered to include only those associated valid cell barcode combinations ...
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bioRxiv - Microbiology 2023Quote: ... a targeted bait-enrichment approach was used to enrich RNA-seq libraries for sequencing on the MiSeq platform (Illumina, San Diego, CA, USA). Hantavirus sequences from each genomic segment (S ...
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bioRxiv - Microbiology 2023Quote: ... This allowed for extensive multiplexing of samples on a single sequencing lane of the MiSeq (Illumina) platform after quantification and normalisation ...
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bioRxiv - Microbiology 2023Quote: ... Both primer sets were tagged with 10 bp oligonucleotides for multiplexing Nextera™ DNA Sample Prep Kit (Illumina®-Compatible ...
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bioRxiv - Microbiology 2023Quote: ... genomic reads from Illumina run SRR341961 of the original study (54 ...
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bioRxiv - Microbiology 2023Quote: ... The quantified and denatured libraries were sequenced using paired-end 2×250-bp chemistry with 5% PhiX as an internal control on the Illumina MiSeq 2000 platform (Illumina Inc., USA). The quality-filtered reads were de-novo assembled using SPAdes (version 3.11.1) ...
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bioRxiv - Molecular Biology 2023Quote: ... The libraries were treated with Illumina Free Adapter Blocking Reagent (Illumina, San Diego, CA, USA) and were sequenced on Illumina NovaSeq 6000 using NovaSeq 6000 S1 Reagent Kit (150 cycles ...
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bioRxiv - Molecular Biology 2023Quote: ... Ribosomal RNAs (rRNAs) were removed using Ribo-Zero rRNA removal kit (Illumina). rRNA-free RNAs were controlled on a Fragment Analyzer (Agilent formerly Advanced Analytical ...
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bioRxiv - Molecular Biology 2023Quote: ... and sequenced on an Illumina NovaSeq 6000 system using the NovaSeq 6000 S4 Individual Lane Loading Reagent kit (#20028313, Illumina; 150 cycles, paired end run 1x 111 bp) with an average of 2×107 reads per sample ...
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bioRxiv - Microbiology 2023Quote: Genomic libraries of clinical GBS isolates were prepared using Nextera XT kits (Illumina, San Diego, CA) and sequenced using the Illumina MiSeq Reagent Kit v3 (600-cycle) ...
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bioRxiv - Microbiology 2023Quote: ... Genomic DNA of samples 161-U7 and 161-I0 were sequenced at Macrogen on a Novaseq 6000 sequencer (Illumina, San Diego, CA) to obtain 151 cycle paired-end libraries with an insert-size of 550 bp using TruSeq Nano DNA library preparation ...
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bioRxiv - Microbiology 2023Quote: ... and cDNA libraries were constructed using the TruSeq Stranded mRNA kit (Illumina), after which they were purified using the Zymoclean Gel DNA Recovery Kit (Zymo Research) ...
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bioRxiv - Microbiology 2023Quote: ... Paired-end sequencing (2 × 150 or 250 cycles) was performed using the NextSeq 550 or MiSeq system (Illumina).
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bioRxiv - Microbiology 2023Quote: ... We stored the DNA at −80° C and an aliquot from each sample was used for sequencing using a MiSeq sequencer (2 × 250 bp, Illumina). A first run was sent to the Integrated Microbiome Resource (Halifax ...
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bioRxiv - Microbiology 2023Quote: Extracted DNA for all samples was sent to The Center for Applied Genomics (Toronto, Canada) for shotgun metagenome sequencing using an Illumina HiSeq platform with paired 2 × 150 bp reads (Illumina, San Diego, CA). Metagenomic reads were quality trimmed using bbduk in the BBTools suite (https://sourceforge.net/projects/bbmap/ ...
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bioRxiv - Molecular Biology 2023Quote: ... PCR-amplified libraries were quantified on a Bioanalyser and appropriately diluted and multiplexed for deep sequencing (Illumina MiSeq 2×75 bp).
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bioRxiv - Microbiology 2023Quote: ... Genomic DNA libraries were prepared using Nextera XT Library Prep Kit (Illumina, San Diego, USA) following the manufacturer’s protocol with the following modifications ...
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bioRxiv - Microbiology 2023Quote: ... Samples were DNAse-treated and sent for library preparation and mRNA-seq by NUcore (Northwestern) on a HiSeq 4000 (Illumina) with 50 bp single-end reads ...
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bioRxiv - Microbiology 2023Quote: ... Genomic libraries were prepared with the NexteraXT DNA Sample Preparation Kit (Illumina) and WGS was performed using Illumina MiSeq and HiSeq instruments ...
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bioRxiv - Microbiology 2023Quote: ... They were then sequenced by Shanghai Biotechnology Corporation on a MiSeq PE300 sequencing system (Illumina, San Diego, USA).
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bioRxiv - Microbiology 2023Quote: ... Sequencing libraries were generated using the TruSeq® DNA PCR-Free Sample Preparation Kit (Illumina, San Diego, CA, USA) following the manufacturer’s recommendations and index codes were added ...
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bioRxiv - Microbiology 2023Quote: ... and tagmentation was processed using the Nextera DNA Flex library Prep kit (Illumina, USA). The sample concentrations were normalized in equimolar concentration at 1 nM ...
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bioRxiv - Microbiology 2023Quote: ... Paired-end sequencing of the pooled libraries was performed with an Illumina MiniSeq Mid Output reagent kit and an Illumina NextSeq 500/550 High Output Kit v2.5 (Illumina, USA), configured to 2 × 150-bp cycles ...
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bioRxiv - Microbiology 2023Quote: ... Resequencing was performed by Illumina HiSeq4000 with 2x 125 bp ...
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bioRxiv - Microbiology 2023Quote: ... The products of DArTag assay were then sequenced on the HiSeq 2500 (Illumina), demultiplexed and targeted SNPs detected using DArT P/L’s proprietary analytical pipeline (DArToolbox) ...