Labshake search
Citations for Illumina :
4751 - 4800 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2023Quote: ... Histones ChIP sequencing (paired-end 50 nt) was performed at Montpellier GenomiX platform on NovaSeq 6000 (Illumina) with NovaSeq Reagent Kits (300 cycles) ...
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Human CCR6+ Th cells show both an extended stable gradient of Th17 activity and imprinted plasticitybioRxiv - Immunology 2023Quote: ... Arrays were washed and scanned following the protocols in the Illumina Whole-Genome Gene Expression Direct Hybridization Assay Guide (Illumina). Signal data were extracted from the image files with the Gene Expression module of the GenomeStudio software (Illumina ...
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bioRxiv - Microbiology 2023Quote: ... amplicons were sequenced for 2□×□150 paired-end reads with MiSeq Sequencing (Illumina). The CRISPResso software was used to analyze the deep sequencing data 32.
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bioRxiv - Cell Biology 2023Quote: ... Libraries were pooled and sequenced on an Illumina® NovaSeq 6000 (Illumina®, San Diego, USA) on an SP flow cell ...
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bioRxiv - Evolutionary Biology 2023Quote: ... Library preparation and whole genome sequencing (using Illumina NovaSeq 6000) of 5 CRISPR mutants was performed by CeGaT (Tübingen ...
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bioRxiv - Cancer Biology 2023Quote: WES sequencing libraries were prepared using Nextera Flex for Enrichment (Illumina, 20025524) according to manufacturer’s instructions ...
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bioRxiv - Developmental Biology 2023Quote: ... The libraries were sequenced on a 2x 35 bp PE run on a NextSeq 550 instrument (Illumina). UMI-tools (v1.0.0 ...
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bioRxiv - Developmental Biology 2023Quote: ... Isolated nuclei were mixed with 50 µl of transposition reaction mix containing Tagment DNA Enzyme 1 (Illumina, 20034197). Samples were incubated using a thermo shaker at 37°C ...
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bioRxiv - Evolutionary Biology 2023Quote: Sequencing libraries were generated with the Stranded mRNA Prep kit (Illumina Catalog # 20040532) using 68-80 ng of RNA for 10 dpf samples and 150 ng of RNA for 17 dpf samples ...
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bioRxiv - Evolutionary Biology 2023Quote: ... and sequencing was performed on a HiSeq4000 Illumina sequencer (Illumina, San Diego, CA, USA), at 16x coverage on average ...
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bioRxiv - Immunology 2023Quote: ... which were then sequenced in dedicated flowcells in paired-end mode on a HiSeq 2500 (Illumina) targeting a depth of 5×104–1×105reads per cell.
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bioRxiv - Microbiology 2023Quote: Amplification of the V4 region of the 16S rRNA gene was carried out in triplicates with primers containing illumina adapters (515F-Illumina 5’-TCG TCG GCA GCG TCA GAT GTG TAT AAG AGA CAG GTG CCA GCM GCC GCG GTA A-3’ and 806R-Illumina 5’-GTC TCG TGG GCT CGG AGA TGT GTA TAA GAG ACA GGG ACT ACH VGG GTW TCT AAT-3’) ...
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bioRxiv - Microbiology 2023Quote: ... Illumina paired[end next-generation sequencing (NGS) was then performed using a 500-cycle Rapid Run kit (Illumina) on a Hiseq2500 sequencer operated by Genewiz (Leipzig ...
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bioRxiv - Microbiology 2023Quote: Amplification of the V4 region of the 16S rRNA gene was carried out in triplicates with primers containing illumina adapters (515F-Illumina 5’-TCG TCG GCA GCG TCA GAT GTG TAT AAG AGA CAG GTG CCA GCM GCC GCG GTA A-3’ and 806R-Illumina 5’-GTC TCG TGG GCT CGG AGA TGT GTA TAA GAG ACA GGG ACT ACH VGG GTW TCT AAT-3’) ...
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bioRxiv - Microbiology 2023Quote: ... Whole genome sequencing variant calling was performed using paired-end reads generated by Illumina sequencing (2 x 150 bp) ...
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bioRxiv - Microbiology 2023Quote: ... We sequenced at least one isolate of all strains across all study periods with both short-read (Illumina) and long-read (Oxford Nanopore ...
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bioRxiv - Microbiology 2023Quote: ... and long range amplicons were used as input DNA for library preparation using the Nextera XT DNA Kit (Illumina) following the manufacturer’s protocol ...
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bioRxiv - Microbiology 2023Quote: ... Libraries for short read sequencing were prepared using the Nextera Flex DNA Library Prep Kit (Illumina), and 150 bp paired-end sequencing was performed on the NovaSeq 6000 system (Illumina) ...
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bioRxiv - Microbiology 2023Quote: ... The sequencing libraries were prepared using a modified protocol for the Nextera XT DNA library preparation kit (Illumina Inc. FC-131-1024). The genomic DNA was fragmented ...
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bioRxiv - Microbiology 2023Quote: ... Samples were sequenced using the MiSeq™ sequencer (Illumina) with paired-end reads (2×150-250 ...
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bioRxiv - Microbiology 2023Quote: ... and 150 bp paired-end sequencing was performed on the NovaSeq 6000 system (Illumina). Libraries for long-read sequencing were prepared using the Ligation Sequencing Kit with Native Barcoding Expansion (Oxford Nanopore Technologies ...
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bioRxiv - Microbiology 2023Quote: ... and NextSeq 500/550 Mid-Output kit v2.5 (Illumina Inc., FC-131-1024). To prepare for short-read sequencing ...
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bioRxiv - Molecular Biology 2023Quote: ... Samples were multiplexed and paired-end sequencing was performed using either a MiniSeq or NovaSeq 6000 (Illumina).
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bioRxiv - Molecular Biology 2023Quote: ... Sequencing data was demultiplexed by Illumina the on-board DRAGEN FASTQ Generation software v3.8.4.
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bioRxiv - Molecular Biology 2023Quote: ... using IDT for Illumina RNA UD Indexes (Illumina: 20040553). Library assessment and quantification was done using Qubit 1x HS DNA (Invitrogen ...
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bioRxiv - Molecular Biology 2023Quote: ... primarily as paired end 2 × 151 read multiplex runs on MiSeq platform (Illumina). We used the ShapeMapper2 algorithm [17] to determine the mutation frequency in chemically modified (5NIA ...
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bioRxiv - Molecular Biology 2023Quote: Libraries were prepared with total RNAs using TruSeq Stranded Total RNA Library Prep Gold Kit from Illumina (San Diego, California) according to the manufacturer ...
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bioRxiv - Molecular Biology 2023Quote: ... RNAseq libraries were prepared using Illumina mRNA Prep kit (Illumina, USA). Libraries were pooled to equal molarity and sequenced on an Illumina NovaSeq (2 × 100bp ...
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bioRxiv - Molecular Biology 2023Quote: ... minus (Table 1) was used for whole-genome sequencing using Illumina short-read sequencing technology (Illumina, California, USA). Paired-end libraries with insert sizes of 327–353 bp were sequenced on a NovaSeq 6000 system (Illumina).
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bioRxiv - Molecular Biology 2023Quote: ... Libraries for RNA-seq were then prepared using the TruSeq Stranded mRNA Library Prep Kit (Illumina, San Diego, CA, USA). Briefly ...
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bioRxiv - Molecular Biology 2023Quote: ... Purified and amplified cDNA was then subjected to library preparation and sequenced on a NovaSeq 6000 instrument (Illumina, USA) to a depth of 40,000 mean read pairs per cell ...
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bioRxiv - Molecular Biology 2023Quote: ... The library was then diluted to 0.6 nM and subjected to paired-end sequencing for 500 cycles using the NovaSeq 6000 system (Illumina). The samples are deposited in GenBank as project PRJNA599071.
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bioRxiv - Molecular Biology 2023Quote: ... The libraries were then pooled in equimolar ratios of 0.6 nM and subjected to paired-end sequencing for 500 cycles using a NovaSeq 6000 system (Illumina).
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bioRxiv - Molecular Biology 2023Quote: ... and sequenced on an Illumina NextSeq500 platform with a 75-cycle NextSeq 500/550 High Output Kit v2.5 (Illumina 20024906).
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bioRxiv - Pharmacology and Toxicology 2023Quote: ... and those with a size of 200–400 base pairs were selected and sequenced using the NovaSeq 6000 system (Illumina Inc., San Diego, CA). Detected changes in gene expression levels were analyzed using the Kyoto Encyclopedia of Genes and Genomes (KEGG ...
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bioRxiv - Neuroscience 2023Quote: ... and sequenced on the NextSeq 500 high-output (Illumina) with 85 bp single-end reads ...
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bioRxiv - Microbiology 2023Quote: ... The V3-V4 region of the 16S ribosomal RNA gene was amplified by PCR with universal bacterial primer sets (5’-TCGTCGGCAGCGTCAGATGTGTATAAGAGACAGCCTACGGGNGGCWGCAG-3’ and 5’-GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAGGACTACHVGGGTATCTAATCC-3’) and was sequenced using MiSeq Reagent kit v3 (600 cycle) (Illumina Inc., California, US). The sequence data were analyzed using QIIME2 (https://qiime2.org/ ...
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bioRxiv - Microbiology 2023Quote: ... ChIP-Seq libraries were prepared using the DNA Sample Prep Kit (Illumina) following manufacturer instructions ...
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bioRxiv - Molecular Biology 2023Quote: ... and the libraries were sequenced by NovaSeq 6000 system (Illumina).
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bioRxiv - Molecular Biology 2023Quote: ... or a 76-bp single-end sequencing on a NextSeq 500 platform (Illumina). A total of 5.5 billion reads were generated.
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bioRxiv - Molecular Biology 2023Quote: DNA libraries were sequenced on the HiSeq X (Illumina) platform with the paired- end 150-nt option.
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bioRxiv - Molecular Biology 2023Quote: ... (Hatfield, Pretoria, South Africa) for sequencing on the Illumina MiSeq sequencing platform (Illumina (Pty) Ltd. ...
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bioRxiv - Molecular Biology 2023Quote: ... for 1[h at 60°C and was subsequently PCR amplified using the primers 5′-AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTC-3′ and 5′-CAAGCAGAAGACGGCATACGAGATJJJJJJGTGACTGGAGTTCAGACGTGTG-3′(where Js indicates the 6-mer index sequence for Illumina sequencing).
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bioRxiv - Molecular Biology 2023Quote: ... The library was prepared using a TruSeq RNA Library Preparation Kit v2 (Illumina) according to the manufacturer’s instructions.
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bioRxiv - Genetics 2023Quote: ... sequencing libraries were generated using Nextera tagmentation (Illumina). Libraries were sequenced on an Illumina MiSeq instrument with paired end 150 bp reads ...
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bioRxiv - Microbiology 2023Quote: ... using the TruSeq stranded mRNA library preparation kit with polyA selection (Illumina, Inc). Libraries were sequenced using the Illumina NovaSeq 6000 at the SNP&SEQ Technology Platform ...
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bioRxiv - Molecular Biology 2023Quote: ... The TruSeq SR Cluster Kit HS4000 (Illumina, Inc, California, USA) was used for cluster generation using 10pM of pooled normalized libraries on the cBOT ...
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bioRxiv - Microbiology 2023Quote: Raw BCL files were converted to fastq files using bcl2fastq/2.20.0 (Illumina, Inc). For quantification of SARS-CoV-2 sgRNA and gRNA expression ...
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An updated C. elegans nuclear body muscle transcriptome for studies in muscle formation and functionbioRxiv - Genetics 2023Quote: ... as per the manufacturer’s protocol and sequenced on the Nextseq 500 instrument (Illumina, San Diego, CA), using 75bp SE chemistry ...
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bioRxiv - Evolutionary Biology 2023Quote: ... and haplocontig level (using BUSCO, see above. Raw Illumina reads were remapped onto their own assembly and Purge Haplotigs ...