Labshake search
Citations for Illumina :
4501 - 4550 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cancer Biology 2023Quote: ... using the HiSeq 3000/4000 SR Cluster Kit (Illumina, SanDiego, USA), sequencing was performed using the HiSeq 3000/4000 SBS Kit (50 cycles ...
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bioRxiv - Cancer Biology 2023Quote: ... cDNA fragments were ligated to IDT for Illumina TruSeq UD Indexed adapters (Illumina Inc, San Diego CA, USA). Quality and quantity of the finished libraries were assessed using a combination of Agilent DNA High Sensitivity chip (Agilent Technologies ...
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bioRxiv - Cancer Biology 2023Quote: ... sequences (9 Go for cell lines and 15 Go for acinar cells) were generated using a NovaSeq 6000 apparatus (Illumina) by Novogen (Cambridge ...
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bioRxiv - Systems Biology 2023Quote: ... and sequenced on a NextSeq 500 machine (Illumina). We sequenced 26 cycles on Read 1 which gives 10x cell-identifying sequence and UMI ...
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bioRxiv - Systems Biology 2023Quote: ... analysis prior to sequencing on a NextSeq 500 machine (Illumina) using 28 cycles for read 1 ...
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bioRxiv - Pathology 2023Quote: ... All cDNA libraries were sequenced on an Illumina NextSeq 500 instrument according to Illumina and 10X Genomics guidelines with 1.4–1.8 pM input and 1% PhiX control library spike-in (Illumina, USA). Sequencing data were processed using 10X Genomics’ Cell Ranger pipeline to generate feature/barcode matrices from raw count data.
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FTSH3 facilitates complex I degradation through a direct interaction with the complex I subunit PSSTbioRxiv - Plant Biology 2023Quote: ... from total genomic DNA and sequenced with a 70-bp read length on a NextSeq 500 system (Illumina). Whole genome sequencing was done using the HiSeq 2500 (Illumina) ...
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bioRxiv - Plant Biology 2023Quote: ... Nuclei were subjected to a transposition reaction with Tn5 (Illumina). For the transposition reaction ...
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bioRxiv - Plant Biology 2023Quote: ... The ATAC-seq libraries were sequenced on HiSeq 4000 platform (Illumina).
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bioRxiv - Plant Biology 2023Quote: ... and together with TruSeq DNA Sgl Index Set A/B (Illumina) to perform adapter ligation ...
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bioRxiv - Neuroscience 2023Quote: ... using a NovaSeq S4 Reagent Kit (200 cycles, catalog no. 20027466, Illumina), at very high sequencing depths ranging between 290-420 10×106 read-pairs per sample ...
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bioRxiv - Molecular Biology 2023Quote: ... Libraries were pooled at an equimolar concentration (4nM) and sequenced on a MiSeq platform using a 250 bp Paired End Sequencing Kit v2 (Illumina).
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bioRxiv - Molecular Biology 2023Quote: ... by using the Nextera XT index kit according to the manufacturer’s recommendation (Illumina). The thermocycling conditions were the same than in step 1 ...
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bioRxiv - Molecular Biology 2023Quote: ... All libraries were sequenced on Illumina Hiseq X10 (Illumina, CA, USA). Raw reads from Illumina sequencing were subjected to adaptor trimming and filtering of low-quality reads by Fastp (version 0.12.3) ...
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bioRxiv - Molecular Biology 2023Quote: ... Reads produced from Illumina libraries were pre-processed and mapped using the rf-map module (parameters ...
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bioRxiv - Molecular Biology 2023Quote: ... The DNA methylation profiling was carried out using the Infinium Mouse Methylation BeadChip (Illumina) according to the manufacturer’s standard protocol ...
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bioRxiv - Microbiology 2023Quote: ... Mutant libraries were then pooled and sequenced by Illumina using the NextSeq® 500/550 High Output Kit v2 at the RNomics platform of the Laboratoire de Génomique Fonctionnelle de l’Université de Sherbrooke (https://rnomics.med.usherbrooke.ca ...
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bioRxiv - Microbiology 2023Quote: ... Equimolar pooling of libraries was performed based on the QC values and sequenced on Illumina NovaSeq 6000 (Illumina, CA, USA) with a read length configuration of 150 paired end for 10 million paired-end reads per sample.
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bioRxiv - Microbiology 2023Quote: ... pooled equimolarily and sequenced on an Illumina MiSeq v3 2×300 base pair (bp) platform (Illumina Inc., San Diego, CA, USA).
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bioRxiv - Plant Biology 2023Quote: ... Nuclei were resuspended in 50 μL of tagmentation reaction mix as per manufacturer instructions (TDE1, Illumina) and incubated at 37°C for 30 mins with gentle agitation every 5 min ...
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bioRxiv - Developmental Biology 2023Quote: Bcl2fastq2 Conversion Software (Illumina) was used to generate de-multiplexed fastq files ...
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bioRxiv - Cancer Biology 2023Quote: ... Pooled libraries were sequenced using a NextSeq500 150-cycle flow cell (Illumina). To identify specific TF activity for each cell cluster ...
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bioRxiv - Cell Biology 2023Quote: ... For Sequencing it was loaded and sequenced on an Illumina NextSeq 2000 platform (Illumina, San Diego, CA, USA) using a P3 50 cycle kit and a read-length of 80 bases.
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bioRxiv - Neuroscience 2023Quote: ... Samples underwent 250 × 2 paired-end sequencing on an Illumina MiSeq (Illumina, San Diego, CA, USA).71 Raw fastq files were processed using the DADA2 pipeline in R ...
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bioRxiv - Neuroscience 2023Quote: ... RNA libraries for RNA sequencing were constructed using the Truseq stranded total RNA kit (Illumina Inc.) which converts the RNA in a total RNA sample into a library of template molecules of known strand origin ...
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bioRxiv - Neuroscience 2023Quote: ... and purified with a RiboZero kit (Illumina). The resulting mRNA fragment inserts were then reverse transcribed to first strand cDNA using reverse transcriptase and random primer in the presence of actinomycin D ...
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bioRxiv - Evolutionary Biology 2023Quote: ... BCL files were converted into FASTQ format using bcl2fastq v1.8.4 (Illumina). Cell Ranger v3.0.2 was used to generate gene-barcode matrix for each sample with mkref and count functions on default parameters ...
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bioRxiv - Systems Biology 2023Quote: ... We diluted libraries and sequenced an equimolar pool all samples on a NextSeq 500 using a 150 cycle mid output kit (Illumina, 20024904) using 28 cycles for read one to capture the 10X barcodes and UMIs ...
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bioRxiv - Microbiology 2023Quote: ... were sequenced by Next-Generation Sequencing (NGS) on the Illumina MiSeq Platform using the Illumina COVIDSeq Kit for library construction (Illumina, San Diego, USA) generating paired-end reads 150 bp long ...
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bioRxiv - Microbiology 2023Quote: ... pooled libraries were sequenced by Illumina NextSeq1000 (paired end).
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bioRxiv - Microbiology 2023Quote: ... cDNA libraries were prepared using Illumina Stranded Total RNA Prep with Ribo-Zero Plus Kit (Illumina 20040529) with IDT for Illumina RNA UD Indexes ...
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bioRxiv - Cell Biology 2023Quote: ... before sequencing with a HiSeq 4000 (Illumina). Sequencing read fastq files were demultiplexed with sabre (https://github.com/najoshi/sabre ...
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bioRxiv - Developmental Biology 2023Quote: ... Libraries were then subjected to paired-end sequencing according to the manufacturer’s protocol (Illumina NovaSeq 6000). Four LT reactions were run in parallel (LT1-4 ...
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bioRxiv - Physiology 2023Quote: RNA sequencing libraries were prepared with the Illumina stranded total RNA prep with ribo-zero plus kit (Illumina, 20040525). LabChip (Perkin Elmer ...
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bioRxiv - Physiology 2023Quote: ... were sequenced on 1 lane for 100 cycles from each end of the fragments on an Illumina NovaSeq 6000 using a NovaSeq 6000 S4 reagent kit v1.5 (Illumina, 20028313) at the McGill Genome Centre ...
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bioRxiv - Physiology 2023Quote: ... CLS138948) and samples were subjected to paired indexing sequencing (Illumina HiSeq 4000). RNA sequencing data were analysed using Seurat.
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bioRxiv - Systems Biology 2023Quote: ... cDNA libraries were pooled and sequenced using v1.5 reagent kit (Illumina) for paired-end sequencing (2×150 ...
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bioRxiv - Developmental Biology 2023Quote: ... bead-bound complexes were resuspended in tagmentation mixture (25µL reaction containing 1 µL of enzyme in 1X buffer, Illumina) and incubated at 37°C for 25minutes ...
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bioRxiv - Plant Biology 2023Quote: ... The library was then sequenced by Illumina MiSeq nano PE150 at the Georgia Genomics and Bioinformatics Core ...
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bioRxiv - Developmental Biology 2023Quote: ... A total RNA of 1μg was used to generate libraries using of Illumina stranded total RNA prep with Ribo-Zero Plus library preparation kit (Illumina, 20040529). The Qubit dsDNA HS (High Sensitivity ...
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bioRxiv - Cancer Biology 2023Quote: ... mRNA was sequenced using the NovaSeq 6000 system (Illumina; paired end, 150bp). FastQC82 confirmed high per base sequence quality and high per sequence quality scores for each individual fastq file and assessed duplicate reads ...
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bioRxiv - Neuroscience 2023Quote: ... or the Infinium HumanMethylation450 BeadChip (Illumina) for FTLD3 ...
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bioRxiv - Cell Biology 2023Quote: ... Sequencing was carried out on the NovaSeq 6000 instrument from Illumina using paired-end 2 x 100 bp ...
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bioRxiv - Microbiology 2023Quote: ... Sequencing libraries were prepared and indexed by adapter ligation and PCR (8 cycles) using the TruSeq Nano DNA Library Prep Kit (Illumina) and TruSeq DNA Single Indexes Set A or B (Illumina) ...
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bioRxiv - Immunology 2023Quote: ... 100,000 nuclei per sample were isolated using an iodixanol gradient and ATAC-seq was subsequently performed according to the original protocol (Buenrostro et al, 2013) using Nextera DNA Sample preparation kit (Illumina, FC-121-1030). After library amplification ...
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bioRxiv - Physiology 2023Quote: ... the flow cell was loaded onto a HiSeq 2500 for sequencing using a HiSeq SBS kit v4 (Illumina). DNA was sequenced from both ends (paired-end ...
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bioRxiv - Biochemistry 2023Quote: ... Sequencing was done on a Miseq instrument (Illumina) using a V3 600 cycles kit ...
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bioRxiv - Developmental Biology 2023Quote: ... Sequencing was performed on a NovaSeq 6000 (Illumina) with 25 million reads per sample.
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bioRxiv - Cancer Biology 2023Quote: ... RNAseq libraries were prepared from the same samples using TruSeq RNA Library Prep kit according to the manufacturer’s instructions (Illumina Part # 15026495). Sequencing data were analyzed using Bowtie v1.0.0 45 to remove rRNA reads ...
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bioRxiv - Developmental Biology 2023Quote: ... Libraries obtained from Illumina Sequencer were demultiplexed into reads in FASTQ format using the “cell ranger mkfastq” pipeline ...