Labshake search
Citations for Illumina :
4251 - 4300 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2023Quote: ... and sequenced using a MiSeq sequencing system with a V3 reagent kit (300 × 2 bp, Illumina, San Diego, CA, USA).
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bioRxiv - Immunology 2023Quote: Genotyping was performed on the Illumina Global Screening Array 24 v3 (Illumina). The vcf file exclusively containing chromosome 6 was used as an input for the Michigan Imputation Server Genotype Imputation HLA (Minimac4 ...
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bioRxiv - Immunology 2023Quote: ... Amplicons were sequenced by Next Generation Sequencing (Illumina). Sequences were annotated in PipeBio ...
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bioRxiv - Immunology 2023Quote: ... 1ug RNA for each sample was used for cDNA libraries construction by Illumina TruseqTM RNA sample prep Kit ...
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bioRxiv - Immunology 2023Quote: ... RNA was sequenced using the Novaseq S4 (Illumina, San Diego, CA, USA) Differential expression was estimated with DESeq2 and VST to log2 transform the normalized counts ...
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bioRxiv - Immunology 2023Quote: ... The 10nM library was denatured and further diluted prior to loading on the NovaSeq6000 sequencing platform (Illumina, v1.5 chemistry ...
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bioRxiv - Immunology 2023Quote: ... The final Illumina-compatible sequencing library underwent paired-end sequencing (150 bp) on a NovaSeq 6000 (Illumina) at GenomeScan.
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bioRxiv - Immunology 2023Quote: ... we have removed ribosomal RNA according to Epicentre Ribo-Zero Gold Kit (Illumina, San Diego, USA). Then ...
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bioRxiv - Immunology 2023Quote: ... and paired end-sequenced on the NovaSeq 6000 (Illumina, read length 2 x 101bp). Adaptor sequences and polyT tails were trimmed from unprocessed reads with fqtrim (v 0.9.7 ...
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bioRxiv - Immunology 2023Quote: ... Libraries were sequenced on the NovaSeq 6000 platform (Illumina), paired-end mode ...
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bioRxiv - Microbiology 2023Quote: ... The libraries from both experiments were generated using the TruSeq Stranded Total RNA library Preparation Kit (Illumina, USA) following the manufacturer’s protocol ...
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bioRxiv - Immunology 2023Quote: ... Samples were sequenced on a HiSeq 2500 (Illumina).
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bioRxiv - Immunology 2023Quote: ... 150µL from the 14pM pool was loaded into each well of an 8-well strip tube and loaded onto a cBot (Illumina) for cluster generation ...
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bioRxiv - Immunology 2023Quote: ... using NextSeq 500 High Output reagent kit (Illumina Inc) (1×75 cycles ...
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bioRxiv - Immunology 2023Quote: ... Libraries were sequenced on an Illumina NextSeq 500 instrument (Illumina Inc) using NextSeq 500 High Output reagent kit (Illumina Inc ...
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bioRxiv - Immunology 2023Quote: ... Samples were then indexed by ligating index barcode to Illumina adapters onto the PCR amplicon using the Nextera XT Index Kit v2 Set A (Illumina). Indexed amplicon DNA concentrations in each sample were quantified ...
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bioRxiv - Immunology 2023Quote: ... we performed high-throughput DNA sequencing of the tagmented library on a NextSeq 500 System (Illumina) to generate paired-end ...
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bioRxiv - Genomics 2023Quote: ... which includes high-quality sequenced (WGS and RNA-seq, Illumina NovaSeq6000-S4) data of randomly consented 61 patients ...
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bioRxiv - Immunology 2023Quote: ... and sequenced using the MiSeq 2 × 300 base pair (bp) paired-end sequencing platform (Illumina). Integrated indexed flow cytometry and sequence data integration as well as Ig gene annotation was performed using sciReptor version 1.0-6-g034c8ae (Busse et al. ...
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bioRxiv - Evolutionary Biology 2023Quote: ... We trimmed sequence reads for Illumina adapter artifacts using the Illumina BaseSpace software (Illumina, San Diego, California, USA).
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bioRxiv - Evolutionary Biology 2023Quote: ... a Nextera Flex library (Illumina) was sequenced using an Illumina NextSeq 500 sequencer ...
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bioRxiv - Genomics 2023Quote: ... and sequenced on the NextSeq 2000 (Illumina) with a 51PE format.
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bioRxiv - Genomics 2023Quote: ... The CUT&Tag libraries were subjected to 50bp paired end sequencing on a NextSeq 2000 platform using a P2 100-cycle kit (Illumina). Antibodies are listed in Key Resources Table.
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bioRxiv - Genomics 2023Quote: ... Products were sequenced using Illumina sequencing (Illumina NextSeq 500). 4C-seq reads were demultiplexed by matching the 5’- ends of the R1 reads to the reading primer sequence (allowing 2 mismatches) ...
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bioRxiv - Genomics 2023Quote: ... DNA was cleaned by AMPure XP beads (Agentcourt, USA) and tagmented and indexed using Nextera XT Index Kit (Illumina, Inc., USA). Clean DNA was again quantified and evaluated using Qubit (Invitrogen ...
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bioRxiv - Genomics 2023Quote: 1 ng of genomic DNA from each sample was used with Illumina MiSeq Nextera XT DNA Library Preparation Kit (Illumina, Inc., USA), the paired-end library was constructed with an insert (500 bp ...
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bioRxiv - Genomics 2023Quote: ... all samples were pooled at 4 nm concentration and paired-end [300bp (2 × 151bp)] sequenced in MiSeq platform (Illumina, USA).
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bioRxiv - Genetics 2023Quote: ... Genome-wide DNA methylation was analyzed using the Infinium Mouse Methylation BeadChip (Illumina). Methylation data were acquired using the iScan system and processed using GenomeStudio 2.0 (Illumina) ...
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bioRxiv - Genetics 2023Quote: ... and embryos were then either recommended for transfer or not recommended for transfer using the following workflow: FASTQ files were obtained from MiSeq Illumina based on two diagnostic tests (Illumina VeriSeq PGS and AB Vector AB-PGT) and aligned on GRCh37 by BlueFuse Multi software (Illumina ...
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bioRxiv - Genetics 2023Quote: ... The background was corrected using the method provided by Illumina. We removed probes with detection P values > 0.01 in at least one sample and filtered probes located on the X ...
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bioRxiv - Genetics 2023Quote: ... DNA methylation data were obtained using the Illumina Infinium Methylation EPIC BeadChip array as previously described (Illumina, San Diego, CA, USA).17 Additional control methylation data were obtained from publicly available datasets taken from the Gene Expression Omnibus (GEO ...
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bioRxiv - Genetics 2023Quote: ... and aligned on GRCh37 by BlueFuse Multi software (Illumina) and CNVector tools (AB Vector) ...
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bioRxiv - Genetics 2023Quote: ... and cDNA libraries were prepared using Nextera XT DNA Sample Preparation Kit (Illumina). Sequencing was performed using NovaSeq (Illumina) ...
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bioRxiv - Genetics 2023Quote: ... Methylation data were acquired using the iScan system and processed using GenomeStudio 2.0 (Illumina). The background was corrected using the method provided by Illumina ...
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bioRxiv - Genetics 2023Quote: ... 10-20% PhiX control DNA (Illumina; cat. no. FC-110-3001) was spiked into the pooled 2 nM DNA amplicon library ...
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bioRxiv - Developmental Biology 2023Quote: ... Sequencing was performed on a NextSeq500 (Illumina) with 75bp single-end reads at the Lunenfeld-Tanenbaum Research Institute Sequencing Facility.
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bioRxiv - Immunology 2023Quote: ... Sequencing was performed in 3 sequencing unit of NovaSeq 6000 (Illumina) (100-nt-length reads ...
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bioRxiv - Immunology 2023Quote: ... Libraries were prepared according to Illumina’s instructions accompanying the TruSeq Stranded mRNA Library Prep Kit (Illumina). 500 ng of RNA was used for each sample ...
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bioRxiv - Immunology 2023Quote: ... FASTQ files were generated using bcl2fastq (Illumina) with standard parameters.
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bioRxiv - Genomics 2023Quote: The Nextera XT Index Kit (Illumina inc.) was used to construct the libraries ...
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bioRxiv - Genomics 2023Quote: ... Libraries for next-generation sequencing were prepared and sequenced with a HiSeq 2500 or 3000 instrument (Illumina). Quality filtering and alignment of the raw reads was done using Trimmomatic16 (version 0.36 ...
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bioRxiv - Genomics 2023Quote: ... and paired-end sequencing was done with a HiSeq 3000 instrument (Illumina).
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bioRxiv - Genomics 2023Quote: ... Libraries for sequencing were prepared according to the manufacturer’s instructions with TruSeq Stranded Total RNA Library Prep Kit with Ribo-Zero Gold (Illumina, RS-122-2301) and paired-end sequencing was done with a HiSeq 3000 instrument (Illumina).
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bioRxiv - Immunology 2023Quote: ... Libraries were then sequenced with Novaseq (Illumina). Fastq files generated by sequencing were aligned and mapped using STAR55 with the human genome assembly version GRCh38 ...
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bioRxiv - Immunology 2023Quote: ... Library preparation was performed with a Nextera XT DNA library preparation kit (Illumina FC-131-1096) with 1 ng of pooled library using dual-index primers ...
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bioRxiv - Microbiology 2023Quote: ... The library was sequenced on the Illumina MiSeq using the MiSeq Reagent Kit v3 (Illumina). Deep sequencing was performed in duplicate for each sample.
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bioRxiv - Microbiology 2023Quote: ... Sequences of six IncX4 plasmids carrying mcr-1 were extracted from Illumina data and gaps were filled by PCR-based strategy and Sanger sequencing.
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bioRxiv - Neuroscience 2023Quote: ... prior to RNA sequencing (paired-end 150 bp, with 12 Gb output) on an Illumina NovaSeq 6000 (Illumina). Quality control and adapter removal were done by Novogene ...
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bioRxiv - Neuroscience 2023Quote: ... The sequencing library was prepared with a standard TruSeq RNA Sample Prep Kit v2 protocol (Illumina), as described previously [30 ...
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bioRxiv - Neuroscience 2023Quote: ... according to the standard manufacturer’s protocol (Illumina). For RNAseq data analysis ...