Labshake search
Citations for Illumina :
4201 - 4250 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Evolutionary Biology 2023Quote: Complementary DNA (cDNA) libraries were prepared using the Illumina TruSeq v2 mRNA sample prep kit (Illumina, San Diego, CA, USA), following a standard protocol ...
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bioRxiv - Evolutionary Biology 2023Quote: ... China: 1.5 µg of DNA was used as input for the TruSeq Nano DNA HT Sample preparation kit (Illumina), with a 350 bp insert ...
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bioRxiv - Evolutionary Biology 2023Quote: ... RNA-seq library preparation was performed using the TruSeq Stranded mRNA sample prep kit from Illumina, and sequenced using Illumina 125bp paired-end reads ...
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bioRxiv - Evolutionary Biology 2023Quote: ... Sequencing data were demultiplexed using the bcl2fastq2 Conversion Software (v2.20, Illumina). Six biological replicates were processed resulting in snRNA-seq data from 120 central brains each for D ...
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bioRxiv - Evolutionary Biology 2023Quote: The mRNA libraries were generated using the Illumina Stranded mRNA Prep kit (Illumina Inc., San Diego, CA, USA) and analyzed using Qubit HS dsDNA and TapeStation HSD1000 reagents (Agilent) ...
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bioRxiv - Cell Biology 2023Quote: ... Libraries were sequenced on a NovaSeq6000 system (Illumina) and the following quantitative analysis was performed using 19 bp cell barcode reads (Read 1 ...
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bioRxiv - Cell Biology 2023Quote: ... Sequencing was performed with an Illumina NovaSeq 6000 (Illumina).
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bioRxiv - Cell Biology 2023Quote: ... RNase H or the Ribo-Zero method (human, mouse, plants) (Illumina, USA) was used to remove rRNA ...
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bioRxiv - Evolutionary Biology 2023Quote: ... submitted to CeGaT GmbH (Germany) and sequenced on a NovaSeq 6000 system (Illumina, USA) in 1×100 base pair (bp ...
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bioRxiv - Evolutionary Biology 2023Quote: ... and all samples were run on one lane of the NovaSeq6000 S4 v1.5 (Illumina, San Diego, United States).
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bioRxiv - Evolutionary Biology 2023Quote: ... which are likely contaminations from Illumina PhiX control sequences ...
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bioRxiv - Evolutionary Biology 2023Quote: ... The libraries were sequenced on an Illumina NextSeq2000 using v3 chemistry (Illumina, San Diego, California, USA), producing approximately 109 2×100 bp reads.
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bioRxiv - Genomics 2023Quote: ... PolyA sequencing libraries were prepared and RNA-Seq was conducted by Novogene Corporation (40M reads, Illumina 150PE).
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bioRxiv - Genomics 2023Quote: ... we conducted whole genome sequencing (WGS) on the HiSeq platform (Illumina, San Diego, CA) in a paired-end format with a read length of 150 bp ...
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bioRxiv - Genomics 2023Quote: ... Samples were pooled and sequenced by Illumina NovaSeq (8.04-12.4M ...
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bioRxiv - Genomics 2023Quote: ... Libraries were generated using Illumina Nextera CD Indexes (Illumina #20018708) and sequenced in paired-end mode (2×75bp ...
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bioRxiv - Genomics 2023Quote: ... using a 150 bp paired-end protocol (Illumina). Raw reads were trimmed using cutadapter version 4.1 ...
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bioRxiv - Genomics 2023Quote: ... All cfMNase-Seq samples were then pooled and sequenced by Illumina NovaSeq (41.2-69.2 million (M) ...
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bioRxiv - Microbiology 2023Quote: Sequencing libraries were generated using the TruSeq DNA PCR-Free Sample Preparation Kit (Illumina, USA), following the manufacturer’s recommendations ...
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bioRxiv - Microbiology 2023Quote: ... The pooled library (600 μL at 20 picomolar) was denatured and sequenced on an Illumina MiSeq sequencer (Illumina Inc., San Diego, CA, US).
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bioRxiv - Microbiology 2023Quote: ... The libraries were constructed using the Nextera DNA prep Kit (Illumina, USA) according to the manufacturer’s protocol ...
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bioRxiv - Genomics 2023Quote: ... Libraries were prepared from 500 ng of total RNA using TruSeq RNA v2 library preparation kit (Illumina) according the manufacturer’s instructions and subsequently quantified and quality checked using Agilent 2100 Bioanalyzer Instrument (DNA 7500 assay) ...
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bioRxiv - Genomics 2023Quote: ... The “mkfastq” module in CellRanger demultiplexes the raw base call (BCL) files generated by Illumina sequencers into FASTQ files ...
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bioRxiv - Genomics 2023Quote: ... according to the manufacture’s protocol (Vazyme Hyperactive® Universal CUT&Tag Assay Kit for Illumina).
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bioRxiv - Genomics 2023Quote: ... Genomes were sequenced by NextSeq (Illumina). Genome sequences are available under the bioproject number PRJNA1041872.
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bioRxiv - Genomics 2023Quote: ... The pooled libraries were sequenced on the IlluminaMiSeqplatform with a V3-300 reagent cartridge (Illumina, San Diego, California, USA) to generate 2x150 bp paired-end reads.
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bioRxiv - Genomics 2023Quote: ... DNA was sequenced at University College London/ University College London Hospitals Biomedical Research Pathogen Genomics Unit using Illumina paired-end technology (Illumina GAII or HiSeq 2000).
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bioRxiv - Genomics 2023Quote: ... 2.5 μl Tagment DNA TDE1 enzyme (Illumina), 16.5 μl PBS and 5 μl H2O ...
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bioRxiv - Genomics 2023Quote: ... along with 10 ul of Nextera DNA Flex Dual Index adapters (Illumina: IDT for Illumina DNA/RNA UD indexes: 20027213) as primers ...
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bioRxiv - Genomics 2023Quote: ... The TruSeq DNA Sample Prep Kit (Illumina Inc. CA, USA) was used for library preparation according to the manufacturer’s instructions ...
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bioRxiv - Genomics 2023Quote: ... we used Manta version 1.6.0 (Chen et al., 2015) according to instructions for germline joint samples analysis (https://github.com/Illumina/manta/blob/master/docs/userGuide/README.md#germline-configuration-examples) ...
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bioRxiv - Genomics 2023Quote: ... the libraries were mixed with 30% PhiX control libraries (Illumina FC-110-3001) and sequenced for 150 cycles for Read 1 and 100 cycles for Read 2 ...
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bioRxiv - Genomics 2023Quote: ... Libraries were pooled and sequenced (2x150nt) on one lane of a S1 flowcell on the NovaSeq 6000 (Illumina, San Diego, CA). FastQ files were generated and demultiplexed with the bcl2fastq v2.20 Conversion Software (Illumina).
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bioRxiv - Genomics 2023Quote: ... 500 cycle kit (Illumina; San Diego, CA).
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bioRxiv - Genomics 2023Quote: ... FastQ files were generated and demultiplexed with the bcl2fastq v2.20 Conversion Software (Illumina).
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bioRxiv - Genomics 2023Quote: ... RNA-seq (2 × 100 nt paired-end reads) was performed using a HiSeq 3000 instrument (Illumina), yielding an average of 38 million reads/sample.
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bioRxiv - Genomics 2023Quote: ... following vendor protocol with poly-A enrichment (Illumina). Libraries were sequenced with 2×75bp paired-end on Illumina NextSeq 500 instrument.
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bioRxiv - Genomics 2023Quote: ... a 51-bp k-mer matrix from Illumina paired raw reads of 136 lablab accessions was created using Jellyfish (v ...
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bioRxiv - Genomics 2023Quote: ... tn5-digested ‘input’ controls were made by performing tagmentation for 50 ng iXist-ChrX genomic DNA by a basic 50 μl transposition mix of 1X TDE buffer and 2.5 μl TDE1 Enzyme (Illumina) in H2O ...
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bioRxiv - Genomics 2023Quote: ... The raw sequencing data were demultiplexed and converted to FASTQ format using bcl2fastq software v2.20.0 (Illumina).
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bioRxiv - Genomics 2023Quote: ... The libraries were sequenced at a target depth of 20,000 paired-end 150 bp reads per sample using a MiSeq machine (Illumina, San Diego, CA, USA). Reads were filtered by length <150 bp and using a maximum expected error threshold of 1.0 ...
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bioRxiv - Genomics 2023Quote: ... Each library was sequenced using 151 base-length read chemistry on a paired-end flow cell on the Illumina NovaSeq6000 (Illumina, USA). After Illumina sequencing ...
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bioRxiv - Genomics 2023Quote: ... Libraries were produced by first fragmenting 75 ng DNA with the Nextera reagent (Illumina, Inc), and ligation of short adapter sequences to fragments ...
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bioRxiv - Genomics 2023Quote: ... Trimmomatic version 0.39 was employed to trim reads after a quality drop below a mean of Q15 in a window of 5 nucleotides and keeping only filtered reads longer than 15 nucleotides (Trimmomatic37: a flexible trimmer for Illumina sequence data). Reads were aligned versus Ensembl mouse genome version mm10 (Ensembl release 101 ...
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bioRxiv - Immunology 2023Quote: Libraries were sequenced on a MiSeq sequencer (Illumina) for 2 × 250 cycles using MiSeq PE cluster generation kits and MiSeq SBS Kit sequencing reagents (Illumina).
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bioRxiv - Genomics 2023Quote: ... and each library was sequenced from 150-bp paired-end reads using a HiSeq 4000 (Illumina). To prepare genomic DNA for sequencing ...
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bioRxiv - Immunology 2023Quote: ... The library was sequenced on a NovaSeq 6000 (Illumina) with 2 x 150-bp paired-end reads ...
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bioRxiv - Immunology 2023Quote: ... sample specific barcodes (Illumina Nextera) were introduced ...
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bioRxiv - Microbiology 2023Quote: ... The product was then sequenced using the MiSeq™ platform (Illumina, San Diego, USA).
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bioRxiv - Microbiology 2023Quote: ... according to the qPCR Quantification Protocol Guide (KAPA Library Quantification Kit for Illumina Sequencing platforms), and qualified using the TapeStation D1000 ScreenTape (Agilent Technologies ...