Labshake search
Citations for Illumina :
1551 - 1600 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2024Quote: ... Libraries were checked for quality and quantity and sent for sequencing on a NovaSeq 6000 instrument (Illumina, USA). Raw results were analyzed using Space Ranger v1.3.1 ...
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bioRxiv - Developmental Biology 2024Quote: ... Pooled libraries were subjected to paired-end sequencing according to the manufacturer’s protocol (Illumina NovaSeq XPlus). BCL Convert Software (Illumina ...
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bioRxiv - Developmental Biology 2024Quote: Basecalling and demultiplexing were performed using bcl2fastq2 v2.20.0.422 (Illumina) and sgRNA-sequences were isolated from the reads using cutadapt v3.1 via hard-clipping ...
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bioRxiv - Cell Biology 2024Quote: ... Equimolar amounts of the libraries were pooled and diluted to 750pM for 150-bp paired-end sequencing on a NextSeq2000 instrument (Illumina) using the P2 300-cycle kit v3 chemistry (Illumina Cat# 20046813 ...
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bioRxiv - Cell Biology 2024Quote: ... using the P2 300-cycle kit v3 chemistry (Illumina Cat# 20046813) as per manufacturer’s instructions ...
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bioRxiv - Developmental Biology 2024Quote: The libraries were sequenced at the NGS (next generation sequencing) Core-Facility of the Leibnitz-Institut für Immuntherapie (LIT) on a NextSeq 550 (Illumina) sequencer ...
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bioRxiv - Developmental Biology 2024Quote: The sequencing was again performed at the LIT NGS Core-Facility on a NextSeq 550 (Illumina) sequencer performing single end sequencing ...
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bioRxiv - Developmental Biology 2024Quote: ... The libraries were sequenced using the NextSeq 2000 P2 Reagents (100 cycles) (Illumina). Sequencing data was extracted in FastQ format ...
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bioRxiv - Neuroscience 2024Quote: ... this new plate was used for library preparation (Nextera XT kit; Illumina, Cat#: FC-131–1096) using a semi-automated pipeline ...
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bioRxiv - Developmental Biology 2024Quote: ... and the libraries were then sequenced PE150 on an Illumina® Novaseq S4 flow cell (Illumina, California, USA) for 26 million reads per library ...
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bioRxiv - Cancer Biology 2024Quote: ... and multiplex sequencing was conducted on a HiSeq2500 instrument (Illumina, San Diego, CA, USA) to generate 60-base reads in single-end format ...
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bioRxiv - Cancer Biology 2024Quote: ... FastQ files for each sample were obtained using CASAVA v1.8 software (Illumina). Reads were aligned to the Ensembl reference genome and converted to reads per gene with the STAR software.
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bioRxiv - Cancer Biology 2024Quote: ... RNA-seq libraries were prepared using TruSeq Small RNA Library Preparation Kits (Illumina) following the manufacturer’s protocol ...
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bioRxiv - Cancer Biology 2024Quote: ... cDNA libraries were sequenced on an Illumina NextSeq 500 (Illumina). Read lengths were 26 bp for read 1 ...
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bioRxiv - Cancer Biology 2024Quote: ... and mRNA expression was determined with the HT-12 v4 chip (Illumina, San Diego, CA, USA). Chromosome 3 status was obtained with Single-nucleotide polymorphism analysis ...
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bioRxiv - Cancer Biology 2024Quote: ... Libraries were sequenced in a HiSeq2500 instrument (Illumina), 2×100 paired end ...
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bioRxiv - Cancer Biology 2024Quote: ... bcl2fastq v2.15.0 (Illumina) was used to convert BCL files to FASTQ files using default parameters ...
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bioRxiv - Cell Biology 2024Quote: ... sequencing using NextSeq500 platform (Illumina) with paired-end reading at 75 bps read-length were performed at the EMBL Genomics Core Facility (Germany).
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bioRxiv - Cell Biology 2024Quote: ... the final pool diluted to 2 nM and sequenced on NovaSeq 6000 (Illumina).
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bioRxiv - Cell Biology 2024Quote: ... Samples were pooled and clustered at 1.25 nM on a NovaSeq6000 system (Illumina) to generate ∼10 M single-read (75bp ...
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bioRxiv - Cell Biology 2024Quote: ... libraries were sequenced on a High-output flow cell (400M clusters) using the NextSeq® 500/550 High Output 150 cycles kit (Illumina), in paired- end 76/76 nt mode ...
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bioRxiv - Cell Biology 2024Quote: ... Each library was barcoded using TruSeq_RNA_LT Indexes (Illumina), according to manufacturer’s instructions (A001 to A017).
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bioRxiv - Cancer Biology 2024Quote: ... Nuclei were then resuspended in 50 μL transposition reaction mix containing 25 μL 2X Tagment DNA buffer (Illumina), 2.5 μL Tn5 transposase (Illumina) ...
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bioRxiv - Cancer Biology 2024Quote: ... Sequencing was carried out on a HiSeq4000 (Illumina) by the Oxford Genomics Centre ...
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bioRxiv - Developmental Biology 2024Quote: ... Single-cell RNA-seq libraries were prepared using a Nextera XT DNA Library Preparation Kit (Illumina) according to the manufacturer’s protocol ...
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bioRxiv - Cancer Biology 2024Quote: ... followed by next generation sequencing using the NovaSeq 6000 S4 flow cell (Illumina) with a 2x150bp paired-end read configuration ...
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bioRxiv - Cancer Biology 2024Quote: ... Sequencing of paired tumor and normal libraries was performed on Illumina HiSeqX or NovaSeq6000 (Illumina) with 150 bp paired-end reads ...
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bioRxiv - Cell Biology 2024Quote: Cells were collected and tagged with Tn5 transposase (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Developmental Biology 2024Quote: ... The Nextera library preparation protocol (Nextera XT DNA Library Preparation kit, Illumina) was used for library preparation ...
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bioRxiv - Microbiology 2024Quote: ... sequencing of PCR product libraries was performed on the Illumina MiSeq platform (Illumina Inc, San Diego, CA, USA). The paired-end (PE ...
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bioRxiv - Cell Biology 2024Quote: Raw paired end reads from ChEC-seq libraries were demultiplexed using bcl2fastq (Illumina), and adaptor dimers and short reads were filtered out using cutadapt58 with parameters ...
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bioRxiv - Systems Biology 2024Quote: ... After quality check libraries were sequenced on a NovaSeq 6000 (Illumina, USA) at 150 bp paired-end to an average of 78.74 (range 63.82 – 94.20 ...
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bioRxiv - Systems Biology 2024Quote: ... and sequenced on a MiSeq (Illumina, USA) running 300 bp PE ...
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bioRxiv - Systems Biology 2024Quote: The sub-libraries were subjected to tagmentation using the Nextera DNA Library Preparation Kit from Illumina. The input material for the tagmentation was measured to 1ng/5μL and the tagmentation reaction was carried out for 5 minutes ...
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bioRxiv - Synthetic Biology 2024Quote: ... v3 reagent kit (Illumina, MS-102-3003). Raw FASTQ files were aligned to a FASTA-format reference file containing the expected amplicon sequences ...
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bioRxiv - Systems Biology 2024Quote: ... Gene expression profiles were generated using an iScan BeadArray scanner (Illumina) and pre- processed by variance stabilization and robust spline normalization ...
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bioRxiv - Microbiology 2024Quote: ... to include ssDNA viruses) using GenomiPhi V3 DNA amplification kit (Cytiva) and sequencing library preparation using the Nextera XT kit (Illumina) was performed at previously described [43] ...
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bioRxiv - Systems Biology 2024Quote: ... pooled and analyzed by paired-end sequencing using NextSeq (Illumina) for each of the three DMG cell lines ...
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bioRxiv - Systems Biology 2024Quote: ... The product was loaded on the NextSeq 500 high output v2 kit (Illumina FC-404-2005) together with two custom primers and two PhIX primers at final concentration of 300 nM each ...
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bioRxiv - Systems Biology 2024Quote: ... and library synthesis was performed using the Illumina TruSeq RNA prep kit (Illumina RS-122-2001). Libraries were pooled and sequenced on the Illumina HiSeq 2500 or 4000 platforms ...
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bioRxiv - Immunology 2024Quote: ... Each sample was sequenced to a minimum depth of 30 million reads using the NovaSeq6000 system (Illumina), according to the manufacturer’s guidelines ...
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bioRxiv - Systems Biology 2024Quote: ... and mixed with hydrolyzed PhIX control library (Illumina FC-110-3001). The final product contained 1.8 pM library with 30% PhIX/70% sample in 1.3 ml HT1 buffer ...
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bioRxiv - Systems Biology 2024Quote: ... and hybridized on mouseWG-6 v2 BeadArrays (Illumina). Slides were scanned using an iScan (Illumina SY-101- 1001 ...
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bioRxiv - Systems Biology 2024Quote: ... Sequencing libraries were prepared with the TruSeq stranded mRNA library prep kit per manufacturer’s recommendations (Illumina, RS-122-2101). Libraries were then pooled and sequenced with a NextSeq 500/550 Mid Output v2 kit (150 cycles ...
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bioRxiv - Systems Biology 2024Quote: ... Slides were scanned using an iScan (Illumina SY-101- 1001) to generate the resulting files.
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bioRxiv - Systems Biology 2024Quote: ... Libraries were then pooled and sequenced with a NextSeq 500/550 Mid Output v2 kit (150 cycles) according to the manufacturer’s recommendation (Illumina, FC-404-2001). Pooled samples were run in triplicate for a minimum sequencing depth of 20 million reads per sample ...
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bioRxiv - Neuroscience 2024Quote: The genome-wide DNA methylation profile was measured by the Infinium MethylationEPIC Kit (Illumina) on New York Brain Bank ...
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bioRxiv - Pharmacology and Toxicology 2024Quote: ... Sequencer (Illumina, Novaseq6000), and fluorescence quantitative PCR instrument (Bio-rad Corporation ...
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bioRxiv - Physiology 2024Quote: ... RNA with RIN > 9 were single-end sequenced on a HiSeq4000 platform (Illumina) with a minimum of 8 M reads per sample at a 50 nt read length ...
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bioRxiv - Physiology 2024Quote: ... Photocleaved oligonucleotides from each spatially resolved ROI were sequenced with the Illumina NextSeq500 sequencer (Illumina). The GeoMx libraries were prepared according to the GeoMx DSP NGS Readout User Manual ...