Labshake search
Citations for Illumina :
1401 - 1450 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2024Quote: ... leaf and flower samples from three biological replicates of Huizhan and ZH11 were collected and sequenced on the NovaSeq 6000 platform (Illumina) following the manufacturers’ recommended procedures.
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bioRxiv - Genomics 2024Quote: ... and 2ng used for tagmentation with the NexteraXT kit (Illumina) per manufacturer’s directions in half volume reactions (25µL total).
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bioRxiv - Genomics 2024Quote: ... The production-scale sequencing of the Hi-C library was performed on a NextSeq2000 sequencer (Illumina) using 150 bp paired-end read mode at the Berlin Center for Genomics in Biodiversity Research.
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bioRxiv - Evolutionary Biology 2024Quote: ... we generated libraries following the Illumina TruSeq protocol (Illumina, IP-202-9001DOC), with the introduction of an additional step of kinetic enrichment ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Libraries for sequencing were prepared with the NEBNext Ultra Directional RNA Library Prep Kit (Illumina), following poly(A ...
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bioRxiv - Evolutionary Biology 2024Quote: ... sequenced by Illumina, and motifs generated as previously described [91].
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bioRxiv - Evolutionary Biology 2024Quote: ... Sweden where library preparation and sequencing was performed by the SNP&SEQ Platform using the TruSeq PCRfree DNA library preparation kit (Illumina Inc.). The libraries were sequenced on the NovaSeq 6000 platform ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Libraries were sequenced on a NovaSeq6000 platform (Illumina) with S4 flow cells by Novogene Europe (Cambridge ...
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bioRxiv - Evolutionary Biology 2024Quote: ... ligation kit (Illumina, 20040532) according to the manufacturer’s instruction from 35 ng of RNA (except for macaque replicate_2 ...
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bioRxiv - Genetics 2024Quote: ... 5 μL index primer N7xx and 5 μL index primer S5xx from Nextera XT V2 Index kit (Illumina, FC-131-2001) were used for the total volume of 50 μL ...
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bioRxiv - Genetics 2024Quote: ... Libraries were sequenced on a NextSeq 2000 machine (Illumina; up to 77 cycles – dual-index ...
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bioRxiv - Genetics 2024Quote: ... Libraries were pooled equimolarly and sequenced on a NovaSeq 6000 S2 flowcell (Illumina) in paired end 150 mode to yield ∼120-278mio fragments.
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bioRxiv - Genetics 2024Quote: ... The construction of the amplicon sequencing library was adapted from Illumina’s protocol #15044223 Rev ...
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bioRxiv - Genetics 2024Quote: ... The 0.2 M NaOH was used to denature the pooled library and PhiX library (Illumina, FC-110-3001). After diluting the libraries with pre-chilled HT1 to 12 pM ...
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bioRxiv - Immunology 2024Quote: ... The RNA was fragmented and transformed into double-stranded cDNA libraries using the TruSeq RNA Sample Preparation Kit v2 (Illumina), following manufacturer’s protocol ...
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bioRxiv - Immunology 2024Quote: ... after cluster generation on a cBot station (Illumina). Raw sequencing reads underwent quality control with fastQC 0.11.9 (https://www.bioinformatics.babraham.ac.uk/projects/fastqc/ ...
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bioRxiv - Immunology 2024Quote: ... Sequencing was performed with 2 x 100 bp read length and 50 million clusters/probe on NovaSeq 6000 (Illumina). Normalization data was provided by CeGat ...
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bioRxiv - Immunology 2024Quote: ... The resulting pools were sequenced on a NovaSeq 6000 instrument (Illumina, San Diego, CA, USA) in 50 base pair paired-end configuration ...
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bioRxiv - Immunology 2024Quote: ... After centrifugation at 500ξ g for 5min at 4°C, the cell pellets were resuspended in tagmentation-mix (containing Tagment DNA buffer, Tagment DNA Enzyme (Illumina), Digitonin (Promega ...
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bioRxiv - Genomics 2024Quote: Sequencing libraries were prepared from 10 -100 ng input DNA using the Nextera DNA flex library prep (Illumina, USA) using IDT for Illumina – Nextera DNA UD Indexes Sets A-D (Illumina ...
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bioRxiv - Genomics 2024Quote: ... Bacterial isolates and a subset of the aquatic environmental cells were sequenced on the NextSeq 2000 (Illumina), while the remainder libraries from aquatic and soil bacteria were sequenced on the Novaseq 6000 (Illumina ...
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bioRxiv - Genomics 2024Quote: ... while the remainder libraries from aquatic and soil bacteria were sequenced on the Novaseq 6000 (Illumina) (Supplementary Tables 5 and 6) ...
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bioRxiv - Genomics 2024Quote: ... using IDT for Illumina – Nextera DNA UD Indexes Sets A-D (Illumina, USA). Fragmentation times and amplification cycles were performed according to the ranges recommended by the manufacturer ...
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bioRxiv - Immunology 2024Quote: ... The molar concentration of the amplicon from each sample was normalized and then sequenced on a NextSeq 500/550 instrument (Illumina). The purified Kinome CRISPR Knockout Library plasmids were also PCR-amplified and sequenced using the same procedure to verify the integrity of the sgRNA library.
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bioRxiv - Genomics 2024Quote: ... Hi-C libraries for scaffolding were generated and sequenced by Arima Genomics (200.48 million PE 150-bp reads; Illumina NovaSeq; Arima Genomics, USA). To aid gene annotation ...
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bioRxiv - Genomics 2024Quote: ... 2nM pools for each kit were prepared for sequencing on a NextSeq 2000 (Illumina) according to the manufacturer’s instructions and sequenced to ∼0.5X coverage per sample.
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bioRxiv - Genomics 2024Quote: ... DNA Prep (Illumina, 20060059), the library prep kit from IDT ...
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bioRxiv - Genomics 2024Quote: ... Ligation (Illumina, San Diego, USA), according to manufacturer’s instructions ...
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bioRxiv - Genomics 2024Quote: ... Miniaturization involved testing libraries at 1/6th (IDT mini) or 1/8th (Roche mini, Illumina mini) of reaction volume tailoring input DNA to each kit between 24-45 ng total (Table 2) ...
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bioRxiv - Genomics 2024Quote: ... We also generated 545.60 million paired-end (PE) 151-bp reads (Illumina NovaSeq ...
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bioRxiv - Genomics 2024Quote: ... Sequencing was performed on the NextSeq500 machine (Illumina). For RRBS ...
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bioRxiv - Genomics 2024Quote: ... using a 100-cycle S2 Kit or NextSeq2000 (Illumina) using a 100-cycle P3 kit (ATAC ...
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bioRxiv - Genomics 2024Quote: ... Paired-end reads of 150 bp were generated using TruSeq RNA Access sequencing chemistry on HiSeq X instrument (Illumina, San Diego, CA) by an external service provider (Macrogen Europe ...
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bioRxiv - Genomics 2024Quote: Libraries were sequenced on the NovaSeq6000 (Illumina) using a 100-cycle S2 Kit or NextSeq2000 (Illumina ...
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bioRxiv - Microbiology 2024Quote: ... Variant type was confirmed in a subset of samples with available nasopharyngeal swabs by SARS-CoV-2 complete genome next-generation sequencing using Artic v5.3.2 (IDT, Coralville, IA) and Artic v4.1 primer sets (Illumina, San Diego, CA).
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bioRxiv - Microbiology 2024Quote: DNA samples were sequenced at the Center for Quantitative Life Sciences at Oregon State University (Corvallis, OR) on an Illumina HiSeq platform using a Nextera XT library preparation kit (Illumina, San Diego, CA). Primer and adaptor removal and read-trimming were performed with fastP using default settings for Nextera adapters (35) ...
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bioRxiv - Microbiology 2024Quote: ... A paired-end library was constructed using a TruSeq DNA PCR-Free Library Prep kit (Illumina, CA, USA) and size-selected on an agarose gel using a Zymoclean Large Fragment DNA Recovery Kit (Zymo Research ...
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bioRxiv - Genomics 2024Quote: DNA concentration was normalized to 1 ng/μl and subjected to library preparation using Nextera XT DNA Library Preparation Kit (Illumina, CA, USA) according to the manufacturer’s instructions and sequenced with NextSeq550 using Mid Output Kit v2.5 (300 cycles ...
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bioRxiv - Genomics 2024Quote: The short-read data (DNBSeq and Illumina ddRADseq) from individual males and females and their pooled data were aligned to the assembly versions with Bowtie2 (Langmead and Salzberg 2012 ...
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bioRxiv - Genomics 2024Quote: ... All libraries were sequenced on the Nova-seq 6000 platform (Illumina) using S4 2×150bp v1.5 kits (Read 1 ...
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bioRxiv - Genomics 2024Quote: ... Libraries were pooled and sequenced on an Illumina Miseq instrument with a Miseq v3 600 cycle kit (Illumina, MS-102-3003) with read lengths of 250x250.
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bioRxiv - Genomics 2024Quote: ... Samples were pooled and sequenced on a MiSeq (Illumina) with 21-bp paired-end sequencing using the following custom read and index primers:
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bioRxiv - Genomics 2024Quote: ... RNA was purified from 1 μg total RNA using RNA purification beads as part of the Truseq Stranded mRNA kit according to the manufacturer’s protocol (Illumina). 1 ng of poly(A)-enriched RNA was loaded into each qRT-PCR reaction.
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bioRxiv - Genomics 2024Quote: ... Nuclei from BMDMs were subjected to tagmentation using Nextera DNA Library Preparation Kit (Illumina). After tagmentation DNA was purified with MinElute PCR Purification Kit (Qiagen) ...
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bioRxiv - Genomics 2024Quote: ... were used to prepare Illumina libraries using the Nextera DNA Flex Library Prep Kit according to the manufacturers’ instructions (Illumina Inc. San Diego, CA, USA). Library quality was measured via electrophoresis in D1000 ScreenTape on an Agilent 4200 TapeStation System (Agilent Technologies Netherlands BV ...
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bioRxiv - Genomics 2024Quote: Sequencing libraries were generated using the TruSeq ChIP Library Preparation Kit – Set A (Illumina, IP-202-1012) according to the manufacturer’s instructions ...
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bioRxiv - Genomics 2024Quote: ... Sequencing was performed using Illumina Miseq (Illumina Inc.). A reference-based genome assembly was conducted using the ViralFlow 1.0 pipeline (Dezordi et al. ...
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bioRxiv - Genomics 2024Quote: ... Unique dual indexes (cat# 20022371, Illumina) were used ...
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bioRxiv - Genomics 2024Quote: ... gDNA from Illumina short-read sequencing (gDNA ILMN ...
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bioRxiv - Genomics 2024Quote: ... The sequencing library was prepared with 1 μg of DNA using the TruSeq PCR-free DNA sample preparation kit (cat# 20015962, Illumina), according to the TruSeq DNA PCR-free Reference Guide ...