Labshake search
Citations for Illumina :
1201 - 1250 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2024Quote: ... Ltd (Hong Kong, China) for polyA selected RNA sequencing library construction using the TruSeq RNA Sample Prep Kit v2 (Illumina Cat. No. RS-122-2001), and 150 bp paired-end (PE ...
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bioRxiv - Genomics 2024Quote: Whole metagenome sequence libraries were prepared using an Illumina Nextera DNA Flex Library Prep kit (Illumina, San Diego, CA) according to the manufacturer’s instructions ...
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bioRxiv - Genomics 2024Quote: ... Library quality control was performed on an Illumina iSeq100 sequencer (Illumina, San Diego, CA). Whole metagenome sequencing was performed on an Illumina NovaSeq6000 instrument with a 500-cycle SP flow cell ...
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bioRxiv - Genomics 2024Quote: ... Library quality control was performed on an Illumina iSeq100 sequencer (Illumina, San Diego, CA). Whole metagenome shotgun sequencing was performed on an Illumina NovaSeq6000 instrument with a 500-cycle SP flow cell ...
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bioRxiv - Genomics 2024Quote: ... The libraries were sequenced on a NovaSeq instrument (Illumina, 150 bp paired-end reads). Fastq files were trimmed with Trim Galore (Cutadapt [v2.8] ...
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bioRxiv - Genomics 2024Quote: ... 1.3 μg of total RNA was prepared for sequencing using the Illumina TruSeq mRNA Stranded Library Kit (Illumina) following the manufacturer’s instructions.
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bioRxiv - Genomics 2024Quote: ... and (ii) Illumina NextSeq 500 platform (Illumina, San Diego, CA), at the Quadram Institute ...
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bioRxiv - Genomics 2024Quote: ... Small RNA library preparation and sequencing were carried out at the Max Planck Institute facility in Freiburg (Germany) with Truseq Small RNA library preparation kit as per manufacturer’s protocol (Illumina). Total RNA extracted from 1 st instar nymphs was also used to produce and sequence RN-Seq libraries (Macrogen ...
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bioRxiv - Genomics 2024Quote: ... base calling and quality scoring of the run were processed using the manufacturer’s software Real Time Analysis (RTA 3.4.4, Illumina) and followed by generation of FASTQ sequence files ...
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bioRxiv - Genomics 2024Quote: ... The 60 libraries were sequenced on NovaSeq6000 (Illumina) in paired-end mode with a read length of 2x151+17+8 bp following the manufacturer’s protocol for dual indexing ...
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bioRxiv - Microbiology 2024Quote: ... and run in a MiSeq (Illumina). Sequencing reads were imported into CLC Genomics Workbench (Qiagen) ...
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bioRxiv - Genomics 2024Quote: ... Library coverage was determined by Illumina Next Generation Sequencing using staggered guide-specific primers for a first target amplification PCR and dual indexing barcodes for a second barcoding PCR using NEBNext PCR polymerase.
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bioRxiv - Genomics 2024Quote: ... Cells were washed with MiSeq buffer PR2 (Illumina), and perturbation barcodes were analyzed by sequencing-by-synthesis using reagents from used Illumina NextSeq 2000 P2 cassettes ...
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bioRxiv - Immunology 2024Quote: ... The Nextera XT Index Kit v2 (Illumina) was used to add the dual-barcoded adaptors ...
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bioRxiv - Genomics 2024Quote: Sequencing libraries were prepared from 10 -100 ng input DNA using the Nextera DNA flex library prep (Illumina, USA) using IDT for Illumina – Nextera DNA UD Indexes Sets A-D (Illumina ...
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bioRxiv - Genomics 2024Quote: ... Bacterial isolates and a subset of the aquatic environmental cells were sequenced on the NextSeq 2000 (Illumina), while the remainder libraries from aquatic and soil bacteria were sequenced on the Novaseq 6000 (Illumina ...
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bioRxiv - Genomics 2024Quote: ... while the remainder libraries from aquatic and soil bacteria were sequenced on the Novaseq 6000 (Illumina) (Supplementary Tables 5 and 6) ...
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bioRxiv - Genomics 2024Quote: ... using IDT for Illumina – Nextera DNA UD Indexes Sets A-D (Illumina, USA). Fragmentation times and amplification cycles were performed according to the ranges recommended by the manufacturer ...
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bioRxiv - Immunology 2024Quote: ... The molar concentration of the amplicon from each sample was normalized and then sequenced on a NextSeq 500/550 instrument (Illumina). The purified Kinome CRISPR Knockout Library plasmids were also PCR-amplified and sequenced using the same procedure to verify the integrity of the sgRNA library.
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bioRxiv - Immunology 2024Quote: ... Indexed amplicons were sequenced on a NextSeq 2000 P3 flow cell (Illumina) with 50 bp single end reads with a target of 50 M reads per sample ...
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bioRxiv - Immunology 2024Quote: ... and the indexed library was sequenced on a NextSeq 2000 P3 flow cell (Illumina) with 50 bp single end reads with a target of 25 M reads per sample ...
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bioRxiv - Immunology 2024Quote: ... All clonal cell lines were genotyped by Illumina sequencing and phenotyped for absence of protein production by western blot.
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bioRxiv - Microbiology 2024Quote: ... rRNA depletion and development of adapter-tagged cDNA libraries were performed using Script-Seq Complete Kit (Bacteria) [Epicentre (Illumina)] ...
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bioRxiv - Microbiology 2024Quote: ... Libraries for sequencing were prepared with Nextera DNA library and indexing kits (Illumina) and run in a MiSeq (Illumina) ...
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bioRxiv - Microbiology 2024Quote: ... Then ribosomal depletion (Ribo-Zero, Illumina) and subsequent cDNA synthesis and conversion into sequencing libraries (SOLiD Total RNA-Seq Kit ...
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bioRxiv - Immunology 2024Quote: ... The sequencing was performed on an Illumina NovaSeq using S1 and S2 100 cycle kits (Illumina, San Diego, CA, USA) with specific dimensions (67 × 8 × 50 bp).
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Resolution of SARS-CoV-2 infection in human lung tissues is driven by extravascular CD163+ monocytesbioRxiv - Immunology 2024Quote: ... The library was sequenced on a MiSeq with a V3 600 cycle kit (Illumina). Sequencing reads were filtered ...
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bioRxiv - Immunology 2024Quote: The RNA-seq library was generated using the TruSeq Stranded Total RNA Sample Preparation kit from Illumina (NEB, USA) following the manufacturer’s recommendations for 150-bp paired-end sequencing ...
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bioRxiv - Immunology 2024Quote: ... or NovaSeq 6000 (Illumina).
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bioRxiv - Immunology 2024Quote: ... and sequenced on either a NextSeq 2000 (Illumina) or NovaSeq 6000 (Illumina).
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bioRxiv - Immunology 2024Quote: ... Deep sequencing was done by RNA-seq (Hiseq2000, Illumina) at the core facility for Bioinformatics and Expression Analysis (Karolinska Institute ...
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bioRxiv - Immunology 2024Quote: ... Raw sequence data were obtained in Bcl-files and converted into fastq text format using the bcl2fastq program from Illumina.
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bioRxiv - Immunology 2024Quote: ... DNA libraries were prepared with ThruPLEX (Rubicon) and sequenced with a Hiseq2000 sequencing system (Illumina) according to the manufacturer’s protocols ...
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bioRxiv - Immunology 2024Quote: ... Bcl-files were converted and demultiplexed to fastq with bcl2fastq (Illumina).
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bioRxiv - Microbiology 2024Quote: ... was used to prepare the sequencing library for sequencing on the HiSeq 2500 and NextSeq 1000 instruments (Illumina), run with the fast protocol ...
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bioRxiv - Microbiology 2024Quote: ... The resulting lag phase RNA-sequencing library (fig. S21B) was sequenced on a NextSeq 500 instrument with a 150 cycles Mid Output Kit (Illumina, San Diego, CA, USA) in paired-end mode (Read 1 ...
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bioRxiv - Microbiology 2024Quote: ... An initial poly A+ RNA isolation step (included in the Illumina protocol) was performed with 1 µg of large RNA to isolate the mRNA fraction and remove ribosomal RNA ...
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bioRxiv - Microbiology 2024Quote: ... ATAC-seq libraries were sequenced as 79 + 79 nt paired end reads using NextSeq 550 (Illumina).
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bioRxiv - Microbiology 2024Quote: ... DNAse-treated RNA extracts from Large RNA fractions were processed for library preparation using the Truseq Stranded mRNA sample preparation kit (Illumina, San Diego, California) according to the manufacturer’s instructions ...
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bioRxiv - Microbiology 2024Quote: ... The PhiX Control v3 Library (Illumina, San Diego, CA, USA) was added as the control.
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bioRxiv - Microbiology 2024Quote: ... The second PCR (adaptor PCR) was performed with limited cycles to attach specific sequencing Nextera v2 Index adapter (Illumina). After purification ...
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bioRxiv - Microbiology 2024Quote: ... Purified libraries were subjected to sequencing on a NextSeq 500 (Illumina).
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bioRxiv - Microbiology 2024Quote: ... Hi-SC2 libraries were prepared and subjected to pair-end sequencing on a NextSeq 500 (Illumina). After sequencing ...
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bioRxiv - Microbiology 2024Quote: Whole genome sequencing (Illumina, San Diego, CA, USA) was used to confirm the isolate identities and their phylogenetic relationships (Table 1 ...
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bioRxiv - Microbiology 2024Quote: ... Paired-end sequencing was performed on an Illumina sequencer according to the manufacturer instructions (PairedEnd DNA sample Prep Kit – Illumina – PE-930-1001). The custom-made adapters were removed from the reads using cut-adapt ...
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bioRxiv - Microbiology 2024Quote: ... libraries construction (TruSeq Stranded mRNA, illumine) and sequencing (NextSeq 500, Illumina) were done following manufacturer instructions ...
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bioRxiv - Microbiology 2024Quote: ... the library was constructed using the Nextera XT kit (Illumina, San Diego, CA, USA). Two technical replicates were generated for each biological sample ...
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bioRxiv - Microbiology 2024Quote: Illumina Miseq (Illumina, USA) NGS strategy ...
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bioRxiv - Microbiology 2024Quote: ... PCR products were checked by gel electrophoresis and sequencing was performed using a MiSeq sequencer (Illumina Inc., San Diego, CA) using a 600 bp kit ...
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bioRxiv - Microbiology 2024Quote: ... amplification and PCR products index labeling adapted from the bacterial 16s rRNA Metagenomic sequencing library preparation (Illumina, USA). The previously designed primers were modified for NGS analysis adding the following overhang adaptors to the 5’-prime end of each forward and reverse primers ...