Labshake search
Citations for Illumina :
9251 - 9300 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Neuroscience 2023Quote: ... and then aligned to the mouse genome using Top-Hat (Illumina) and fragments were assigned to genes using the FeatureCounts program (iCONICS core facility ...
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bioRxiv - Cancer Biology 2023Quote: ... DNA libraries for sequencing were prepared using the TruSeq DNA library Prep Kit (Illumina, CA, USA) and quantified using the KAPA Library Quantification kit (KAPA Biosystems ...
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bioRxiv - Molecular Biology 2023Quote: ... Dual indexed samples were de-multiplexed using bcl2fastq software (Illumina).
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bioRxiv - Molecular Biology 2023Quote: ... Libraries (100 bp single-end) were sequenced on a NovaSeq 6000 S2 flowcell platform (Illumina, San Diego, USA). RRBS library preparation and sequencing were conducted at the Ramaciotti Centre for Genomics (UNSW ...
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bioRxiv - Molecular Biology 2023Quote: ... followed by sequencing with an Illumina HiSeq 2500 (Illumina, San Diego, IL, USA) to construct a library.
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bioRxiv - Molecular Biology 2023Quote: ... Sequencing was performed on a NextSeq 550 (Illumina) system using a NextSeq 500/550 High Output v2.5 (75 Cycles ...
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bioRxiv - Immunology 2023Quote: ... 50 million reads/sample was done with the NextSeq 500 High Output Kit v2 (300 cycles) sequencer (Illumina Inc) generating paired end reads of approximately 2 × 150 bp in length ...
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bioRxiv - Microbiology 2023Quote: ... Libraries were prepared using Tru-Seq Stranded mRNA Library Prep kit for NeoPrep (Illumina, San Diego, USA) and 100 ng total RNA ...
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bioRxiv - Cancer Biology 2023Quote: Real Time Analysis software (Illumina) was used for primary processing of sequencing images ...
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bioRxiv - Microbiology 2023Quote: ... or TruSeq Stranded Total RNA Ribo-Zero Gold (Illumina #RS-122-2303). 2-4 biological replicates were sequenced for all samples ...
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bioRxiv - Microbiology 2023Quote: ... RNA was ribominus selected and directional cDNA libraries were generated using either Stranded Total RNA Prep with Ribo-Zero Plus (Illumina # 20040525) or TruSeq Stranded Total RNA Ribo-Zero Gold (Illumina #RS-122-2303) ...
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bioRxiv - Biochemistry 2023Quote: ... The libraries were made by NEBNext® Ultra™ II DNA Library Prep Kit (Illumina) according to the manufacturer’s instructions and submitted to Novogene for NGS with PE150.
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bioRxiv - Neuroscience 2023Quote: ... Indexing libraries using Nextera i5 and i7 indexed amplification primers (Illumina XT index kit, 15055290) occurred alongside library amplification with NEBNext High-Fidelity PCR Master Mix (New England Biolabs ...
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bioRxiv - Molecular Biology 2023Quote: ... The RNA solution was then applied to the HiSeq 3000 system (Illumina, CA, USA). Read count data were processed using Cell Ranger (10X Genomics ...
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bioRxiv - Molecular Biology 2023Quote: ... with 50-nt single-end read mode or HiSeqX Ten (Illumina) with 150-nt paired-end mode.
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bioRxiv - Molecular Biology 2023Quote: DNA libraries were sequenced on HiSeq 4000 (Illumina) with 50-nt single-end read mode or HiSeqX Ten (Illumina ...
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bioRxiv - Molecular Biology 2023Quote: ... The amplicons were sequenced by a NextSeq 550 sequencer with a NextSeq 500/550 Mid Output v2.5 300 cycle kit (Illumina) with custom sequencing primers VV16 and VV18 for read 1 and read 2 (paired-end) ...
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bioRxiv - Molecular Biology 2023Quote: ... DNA fragments were then amplified by PCR using Nextera index primer 1 and 2 (Illumina) and produced by PCR amplification (10–13 cycles ...
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bioRxiv - Molecular Biology 2023Quote: We constructed an assay for transposase-accessible chromatin (ATAC) using a Tn5-Nextera DNA library prep kit (Illumina, San Diego, CA, USA), following the manufacturer’s protocol (48) ...
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bioRxiv - Molecular Biology 2023Quote: ... quantified and finally sequenced on a Novaseq 6000 sequencer (Illumina) with a PE150 model ...
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The spatial landscape of progression and immunoediting in primary melanoma at single cell resolutionbioRxiv - Cancer Biology 2022Quote: ... or NextSeq (Illumina) sequencer.
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bioRxiv - Biochemistry 2022Quote: ... Base calling was done by Illumina Real Time Analysis (RTA ...
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bioRxiv - Systems Biology 2022Quote: ... Sequencing libraries were prepared by following the Illumina Stranded Total RNA Prep with Ribo-Zero Plus (Illumina Inc., San Diego, CA) from 100 ng of total RNA ...
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bioRxiv - Genetics 2022Quote: ... Base calling was done by Illumina RTA3 and output of NCS was demultiplexed and converted to FastQ format with Illumina Bcl2fastq v1.9.0.
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bioRxiv - Developmental Biology 2022Quote: ... and sequenced on Illumina HiSeq 2000 (Illumina, San Diego, CA). Data was analyzed using SNPtrack (http://genetics.bwh.harvard.edu/snptrack/) ...
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bioRxiv - Genomics 2022Quote: ... Libraries were prepared using the Nextera XT DNA Library preparation kit (Illumina), and MinION one-dimensional (1D ...
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Three Distinct Transcriptional Profiles of Monocytes Associate with Disease Activity in SSc PatientsbioRxiv - Genomics 2022Quote: ... followed by Nextera XT protocol (Illumina). For NCM samples ...
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bioRxiv - Genomics 2022Quote: ... WGS was performed on the HiSeq X (HCS HD 3.5.0.7; RTA v2.7.7) or NovaSeq v1.0 (Illumina) at 2 x 150-bp read length ...
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bioRxiv - Genomics 2022Quote: ... we used the same standards as were applied to our LUAD cohort to demonstrate generalizability of our SNV-only approach across sequencing platforms (Illumina HiSeq X in LUAD cohort and Illumina NovaSeq v1.0 in Neo cohort).
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bioRxiv - Microbiology 2022Quote: ... 76-bp sequencing was performed using MiSeq (Illumina) with MiSeq reagent kit v3 (Illumina ...
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bioRxiv - Microbiology 2022Quote: ... with MiSeq reagent kit v3 (Illumina, Cat# MS-102-3001). Sequencing reads were trimmed using fastp v0.21.028 and subsequently mapped to the viral genome sequences of a lineage A isolate (strain WK-521 ...
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bioRxiv - Microbiology 2022Quote: ... Library construction and sequencing (Illumina NovaSeq 6000 platform) were performed at Novogene ...
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bioRxiv - Microbiology 2022Quote: ... The sequencing library was constructed using the TruSeq™ Nano DNA LT Sample Prep Kit–Set A (Illumina, USA) and amplified using the TruSeq PE Cluster Kit (Illumina ...
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bioRxiv - Microbiology 2022Quote: ... and amplified using the TruSeq PE Cluster Kit (Illumina, USA).
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bioRxiv - Microbiology 2022Quote: ... Fastq files were generated with bcl2fastq (Illumina) and aligned to the Syrian golden hamster genome (MesAur 1.0 ...
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bioRxiv - Microbiology 2022Quote: ... and aligned to the Syrian golden hamster genome (MesAur 1.0, ensembl) using the RNA-Seq Alignment application (Basespace, Illumina). Salmon files were analyzed using the DESeq2 analysis pipeline (Love et al. ...
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bioRxiv - Microbiology 2022Quote: All resulting fastq files were aligned to the Homo Sapiens genome (GRCh38, RefSeq) using the RNA-Seq Alignment application (Basespace, Illumina). Salmon files were analyzed using the DESeq2 analysis pipeline (Love et al. ...
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bioRxiv - Microbiology 2022Quote: ... and a DNA library was prepared using Illumina Nextera DNA Library Preparation kit (Illumina, San Diego, CA). Fragmented and tagged DNA was subjected to MiSeq at the Stony Brook Microarray Facility ...
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bioRxiv - Microbiology 2022Quote: ... and sequenced on Illumina NovaSeq 6000 (Illumina, San Diego, CA, USA) using the NovaSeq v1.5 SP Reagent Kit (300 cycles) ...
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bioRxiv - Molecular Biology 2022Quote: ... 5ul of 10uM NEB universal primer and 10uM NEB index primer (in NEBNext Multiplex Oligos for Illumina, NEB E7335, E7500), 0.5ul of Phusion DNA polymerase and 21.5ul H2O ...
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bioRxiv - Neuroscience 2022Quote: 100 ng of total RNA was used to generate RNA-seq libraries using Illumina TruSeq stranded mRNA LT kit (Illumina, 20020594), following the manufacturer’s protocol ...
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bioRxiv - Neuroscience 2022Quote: ... Pellets were lysed and DNA precipitated and DNA was used to generate libraries using TruSeq Nano DNA Library Prep Kit (Illumina), libraries were sequenced using NextSeq 500 Sequencing System (Illumina) ...
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bioRxiv - Systems Biology 2022Quote: ... we sorted 500-1000 clonally expanded HLA-A2/YFV NS4b-specific CD8+ T cells directly into 22.5μl of ATAC-buffer (12.5μl 2× TD Buffer (Illumina), 0.5μl 1% Digitonin (Promega G9441) ...
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bioRxiv - Systems Biology 2022Quote: ... RTA (version 2.4.11; Illumina) was used for base calling and MultiQC (version 1.7 ...
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bioRxiv - Systems Biology 2022Quote: ... RTA (version 2.4.11; Illumina) was used for base calling and MultiQC (version 1.7 ...
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bioRxiv - Synthetic Biology 2022Quote: ... Indexes were added to the amplified DNA using i5 and i7 primers from the Nextera XT Index Kit (Illumina # FC-131-1002). Indexed samples were loaded into a MiSeq Reagent Kit v3 600-cycle (Illumina # MS-102-3003 ...
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bioRxiv - Synthetic Biology 2022Quote: ... cartridge sequenced on a MiSeq (Illumina). Reads for each CAR costimulatory domain construct were counted using software provided by Ian Webster at Zenysis Technologies.
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bioRxiv - Synthetic Biology 2022Quote: ... Indexed samples were loaded into a MiSeq Reagent Kit v3 600-cycle (Illumina # MS-102-3003) cartridge sequenced on a MiSeq (Illumina) ...
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bioRxiv - Plant Biology 2022Quote: ... pair-end sequencing was performed using the Illumina Novaseq platform (Illumina, CA, USA).
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bioRxiv - Microbiology 2022Quote: Genomic DNA library was constructed using the tagmentation method (Nextera XT, Illumina, San Diego, CA, USA) and was selected with an average insert size of around 400-1000 bp using AMPure XP beads ...