Labshake search
Citations for Illumina :
9201 - 9250 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2023Quote: ... libraries were prepared with Ilumina compatible NEXTflex Rapid DNA-seq Kit and sequenced on a NextSeq2000 (Illumina). At least two independent biological replicates were performed for each histone modification and RNA Pol II chromatin immunoprecipitation assays.
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bioRxiv - Genomics 2023Quote: ... Libraries were then sequenced on the NovaSeq 6000 platform (Illumina, CA, USA) and 150 bp pair-ended reads were generated to provide ∼12 G of sequence data.
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bioRxiv - Genomics 2023Quote: ... The libraries were sequenced in 0.6 lanes to obtain PE150 reads on a HiSeq X (Illumina). Quality control of the obtained fastq files for individual libraries was performed with FASTQC v0.11.5 (https://www.bioinformatics.babraham.ac.uk/projects/fastqc/).
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bioRxiv - Genomics 2023Quote: ... and IDT for Illumina RNA UD Indexes Set A Ligation (Illumina, Cat. No. 20040553) according to its standard protocol unless stated otherwise below ...
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bioRxiv - Genomics 2023Quote: The libraries were sequenced on NextSeq 500 machine with customized sequencing primers as follows: Read 1 sequencing primer: ACA CTC TTT CCC TAC ACG ACG CTC TTC CGA TCT (the same as Illumina Tru-seq i5 sequencing primer), Read 2 sequencing primer ...
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bioRxiv - Cell Biology 2023Quote: ... nuclei were treated with Tn5 enzyme (Illumina, Cat. #20034197) for 30 minutes at 37°C and purified with Minelute PCR Purification Kit (Qiagen ...
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bioRxiv - Cell Biology 2023Quote: ... Raw sequence data (.bcl files) generated from Illumina HiSeq was converted into fastq files and de-multiplexed using Illumina’s bcl2fastq 2.17 software ...
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bioRxiv - Cell Biology 2023Quote: ... 940 µl ice-cold buffer HT1 (Illumina) was added to generate a 20 pM library ...
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bioRxiv - Cell Biology 2023Quote: PCR amplicons were sequenced using a NextSeq 550 (Illumina, San Diego, CA) using a NextSeq 500/550 High Output Kit v2.5 (75 Cycles) ...
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bioRxiv - Cell Biology 2023Quote: ... Sequencing runs were processed into fastq files by index using bcl2fastq (Illumina).
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bioRxiv - Genetics 2023Quote: ... The WGS libraries were pooled and sequenced on a HiSeq 3000 instrument (Illumina, San Diego, CA) to at least 20-fold coverage ...
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bioRxiv - Genomics 2023Quote: All animals imputed to sequence were initially genotyped on either (Illumina) Geneseek custom 50K or 25K SNP chips ...
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bioRxiv - Evolutionary Biology 2023Quote: ... Sequences were generated at the Berlin Center for Genomics in Biodiversity Research (BeGenDiv) on the Illumina MiSeq platform (Illumina, San Diego, California, USA) using v2 chemistry with 500 cycles ...
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bioRxiv - Developmental Biology 2023Quote: ... and 5 µM RT Primer (RTP, TruSeq kit; Illumina) was then performed according to the manufacturer’s recommendations ...
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bioRxiv - Genomics 2023Quote: ... Note the TruSeq Mammalian Ribo Profile Kit (illumina, RPHMR12126) and RiboZero Plant Leaf kit (Illumina, MRZPL1224) described here have been discontinued ...
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bioRxiv - Genomics 2023Quote: ... The pools were then sequenced on a Novaseq 6000 instrument (Illumina) in single-end 100 bp format at the Institute for Genomic Medicine at UCSD or the La Jolla Institute for Immunology.
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bioRxiv - Genomics 2023Quote: ... we processed 500 ng of total RNA using the TruSeq Stranded mRNA Library Prep kit (Illumina, Cat # 20020595 ...
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bioRxiv - Genomics 2023Quote: ... groups was based on 5 μg of total RNA according to the manufacturer’s protocol using the Illumina HiScanSQ Instrument (Illumina, USA) and sequenced in the same flow cell as paired-end (2 × 100 bp) ...
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bioRxiv - Immunology 2023Quote: ... Sequencing was performed on a NovaSeq 6000 instrument (Illumina). Read depth was targeted at 30K reads per cell for GEX and ∼8K for surface and TCR-BCR libraries ...
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bioRxiv - Immunology 2023Quote: ... paired-end sequencing (Illumina, San Diego, CA). Data were assembled with Sciscloud® software (Scisco Genetics Inc. ...
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bioRxiv - Immunology 2023Quote: ... The libraries were pooled prior to sequencing on a NovaSeq 6000 instrument (Illumina) using the following configuration ...
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bioRxiv - Immunology 2023Quote: ... Four plates were pooled together and sequenced on a NextSeq500 instrument (Illumina) with 75 bp paired-end reads in high-output mode.
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bioRxiv - Immunology 2023Quote: ... 2 (Illumina) was the primer source ...
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bioRxiv - Developmental Biology 2023Quote: ... Sequencing: 150 bp paired-end reads (Illumina NextSeq 600), samples received 28 million paired-end reads and Cell Ranger Software Suite 3.0.2 (10x Genomics ...
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bioRxiv - Cancer Biology 2023Quote: ... Equimolar multiplexed libraries were then sequenced using 100 or 150 bp paired-end runs on HiSeq 4000 or NovaSeq 6000 S4 platforms (Illumina) at the DKFZ Genomics and Proteomics Core Facility ...
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bioRxiv - Evolutionary Biology 2023Quote: ... followed by the Nextera XT DNA library preparation kit (Illumina, FC-131-1024, FC-131-1096) per manufacturer instructions ...
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bioRxiv - Evolutionary Biology 2023Quote: ... The whole genome has been sequenced on a NovaSeq SP system (Illumina, 2X150 bp).
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bioRxiv - Genomics 2023Quote: ... respectively (Illumina, San Diego, USA). After demultiplexing and adapter trimming ...
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bioRxiv - Genomics 2023Quote: ... Libraries were quantified and sequenced (paired-end, 2 x 111 cycles) using the Illumina NovaSeq 6000 device (Illumina Inc., San Diego, CA, USA) at IPK Gatersleben54 ...
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bioRxiv - Cancer Biology 2023Quote: ... Library preparation was performed using Illumina TruSeq Stranded mRNA Sample Library Preparation kit (Illumina) following manufacture’s protocol ...
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bioRxiv - Cancer Biology 2023Quote: ... Illumina Ribo Zero Gold for human/mouse/rat kit (Illumina) was used to remove rRNA during sample preparation per manufacturer’s protocol ...
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bioRxiv - Cancer Biology 2023Quote: ... and samples were demultiplexed and converted to Fastq using bcl2fastq (v2.19, Illumina). Fastp [71] was used to perform quality control analysis and adapter removal ...
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bioRxiv - Immunology 2023Quote: ... We sequenced the libraries on 2 lanes of a NovaSeq S4 (Illumina), aligned using CellRanger (10X Genomics ...
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bioRxiv - Cell Biology 2023Quote: ... Editing frequencies in samples collected following transplantation were assessed via deep sequencing of PCR amplified libraries of the CD33 gRNA target region (Table S1) on an Illumina Miseq (Illumina, San Diego, CA) via 300bp paired end reads and a median sequencing depth of 100,000 reads/gRNA target site ...
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bioRxiv - Neuroscience 2023Quote: ... the raw sequencing data from Illumina HiSeq’s BCL files was converted to expression counts matrices ...
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bioRxiv - Immunology 2023Quote: ... Sequencing was performed with a Novaseq6000 sequencer (Illumina). See sample metadata for further details (Supplementary Table 1 ...
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bioRxiv - Genomics 2023Quote: ... and ligation of NEBNext adaptors (NEBNext Multiplex Oligos for Illumina kit, New England BioLabs). Libraries were digested using the USER enzyme (New England BioLabs) ...
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bioRxiv - Cell Biology 2023Quote: ... and amplicon sequencing by Illumina MiSeq at 250 bp x 250bp paired-end reads ...
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bioRxiv - Microbiology 2023Quote: ... tuberculosis gDNA was fragmented with a Covaris S220 ultrasonicator and a whole genome library was prepared using the TruSeq Nano library preparation kit (Illumina). Library fragments containing Tn junctions were PCR-amplified from the whole genome library using the Tn-specific primer Mariner_1R_TnSeq_noMm and Illumina p7 primer (Table S4) ...
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bioRxiv - Systems Biology 2023Quote: ... The raw Illumina amplicon sequence data was uploaded to BaseSapce Website (Illumina, San Diego, CA, United States) to assess sequence run quality and completion ...
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bioRxiv - Evolutionary Biology 2023Quote: For samples (yLIC136) sequenced on the HiSeq platform (Illumina), PCR amplification of the transposon genome-junctions ...
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bioRxiv - Cell Biology 2023Quote: ... using a NovaSeq 6000 SP Reagent Kit (Illumina) to generate 108-nucleotide single-end reads ...
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bioRxiv - Cell Biology 2023Quote: ... RNA-seq libraries were subjected to paired-end sequencing (53 nucleotides each) on NovaSeq 6000 (Illumina) using a NovaSeq 6000 SP Reagent Kit (Illumina) ...
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bioRxiv - Microbiology 2023Quote: ... transcriptomic libraries were generated and sequenced on an Illumina NovaSeq 6000 (S4 flow cell, 100bp paired-end; Illumina, San Diego, CA). Raw data is available in the NCBI SRA under the accession number PRJNA857920 ...
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bioRxiv - Neuroscience 2023Quote: ... RNA samples with RQNs ranging from 8 to 10 were used for RNA library preparation with the TruSeq Stranded mRNA Library Prep Kit (Illumina, San Diego, CA). Briefly ...
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bioRxiv - Evolutionary Biology 2023Quote: ... using the TruSeq Nano DNA Library Preparation Kit (Illumina). The library was sequenced on an Illumina NovaSeq 6000 machine ...
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bioRxiv - Cancer Biology 2023Quote: ... 200-cycle sequencing kit (Illumina Inc.) to a depth of 70M reads per sample.
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bioRxiv - Cancer Biology 2023Quote: ... The libraries were subjected to paired-end sequencing (150 nt each) on the HiSeq-PE150 instrument (Illumina). Two paired-end reads ...
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bioRxiv - Cancer Biology 2023Quote: ... cDNA fragments were ligated to IDT for Illumina TruSeq UD Indexed adapters (Illumina Inc). Library quality was assessed using Aglient DNA High Sensitivity chip (Agilent Technologies ...
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bioRxiv - Cell Biology 2023Quote: cDNA libraries were prepared from 1 μg total RNA of each sample using the TruSeq Stranded mRNA Sample Prep Kit (Illumina, Inc., San Diego, CA, USA), according to the manufacturer’s instructions ...