Labshake search
Citations for Illumina :
9401 - 9450 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Developmental Biology 2022Quote: ... Amplification and sequencing of the V4 hypervariable region of 16S rRNA gene by Illumina MiSeq were performed for as described previously by Caporaso et al ...
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bioRxiv - Microbiology 2022Quote: ... The quality of the obtained sequences was checked with FastQ files generated at the end of the run (MiSeq Reporter Software, Illumina, USA) and additional PhiX Control ...
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bioRxiv - Microbiology 2022Quote: ... 15 Gb output) was used according to the manufacturer’s instructions for library preparation and sequencing on a MiSeq 2 (Illumina, San Diego, USA). The quality of the obtained sequences was checked with FastQ files generated at the end of the run (MiSeq Reporter Software ...
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bioRxiv - Molecular Biology 2022Quote: ... The raw MiniSeq output was de-multiplexed using bcl2fastq2 (Illumina, version 2.20.0) with the flag --barcode-mismatches 0 ...
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bioRxiv - Cell Biology 2022Quote: Library preparation was completed using the TruSeq Stranded mRNA kit (Illumina RS-122-2103) per manufacturer instructions ...
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bioRxiv - Cell Biology 2022Quote: ... The RNA samples were sent to the JHMI Transcriptomics and Deep Sequencing Core and quantified by deep sequencing with the Illumina NextSeq 500 platform (Illumina, San Diego, CA). Data analyses were performed using software packages including Partek Genomics Suite ...
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bioRxiv - Evolutionary Biology 2022Quote: We used Stacks v.2.41 (Catchen et al. 2011; 2013) to build loci from Illumina reads ...
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bioRxiv - Evolutionary Biology 2022Quote: ... Doyle and Doyle 1987) and subjected to PCR (for Sanger sequencing) or rolling-circle amplification with the GE TempliPhi kit (for Illumina sequencing) per the manufacturer's instructions ...
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bioRxiv - Genomics 2022Quote: ... and subsequently used for library preparation with the TruSeq Nano DNA library preparation kit (Fa. Illumina). End repaired fragments were size selected by AmpureXp Beads (Fa ...
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bioRxiv - Neuroscience 2022Quote: ... Single-cell libraries were sequenced using the NextSeq 500 Sequencing System (Illumina). Library preparation and sequencing was completed by the Genome Analysis and Technology Core at the University of Virginia.
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bioRxiv - Genomics 2022Quote: ... Pooled libraries were then sequenced on iSeq or MiSeq (Illumina) at loading concentrations 35 pM or 8 pM ...
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bioRxiv - Genomics 2022Quote: ... USA) from which ~500bp insert indexed sequencing libraries were generated using the Illumina TruSeq v2 Library Construction Kit (Illumina, San Diego, CA). Single-end 100-bp reads were generated from D ...
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bioRxiv - Genomics 2022Quote: Separate sample collection and preparation were done to obtain the data from Illumina whole-genome shotgun sequencing which were used to analyze the repetitive DNA content of D ...
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bioRxiv - Genomics 2022Quote: ... The library was sequenced on an Illumina NovaSeq instrument (Illumina, San Diego, CA, USA) using 150 base-length read chemistry in a paired-end mode ...
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bioRxiv - Physiology 2022Quote: ... Sequencing libraries were prepared from 100 ng of total RNA using the TruSeq Stranded Total RNA sample preparation kit (Illumina) according to the manufacturer’s protocol ...
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bioRxiv - Genomics 2022Quote: ... Each library was sequenced using 151 bp paired end reads chemistry on an Illumina NovaSeq 6000 sequencer (Illumina, San Diego, CA, USA).
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bioRxiv - Genomics 2022Quote: RNA-Seq library preparations were carried out from 500ng to 2000ng of total RNA using the TruSeq Stranded mRNA kit (Illumina, San Diego, CA, USA), which allows mRNA strand orientation (sequence reads occur in the same orientation as antisense RNA) ...
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bioRxiv - Microbiology 2022Quote: ... Sequencing libraries were prepared with MiSeq reagent kit v.2 (Illumina, USA), targeting mainly dsDNA viruses ...
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bioRxiv - Microbiology 2022Quote: ... sequence data was demultiplexed and Fastq files generated using Bcl2Fastq conversion software from Illumina.
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bioRxiv - Microbiology 2022Quote: ... and the NovaSeq™ 6000 Sequencing system (Illumina®) (paired ends ...
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bioRxiv - Genomics 2022Quote: Illumina’s TruSeq Stranded mRNA Library Prep Kit (#20020594, Illumina) was used on 500 ng of total RNA for the preparation of strand-specific sequencing libraries according to manufacturer’s guidelines ...
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bioRxiv - Genomics 2022Quote: ... sequencing was carried out on the Nichols reference strain using the Illumina NovaSeq 6000 platform following the manufacturer’s recommendations (Illumina, San Diego, CA). Sequencing of isolate CDC-SF003 and swab specimens were carried out using the MiSeq v2 (500 cycle ...
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bioRxiv - Genomics 2022Quote: ... and diluted to 12 pM for sequencing on NovaSeq 6000 (Illumina) according to manufacturer’s guidelines with the exception of a custom sequencing primer (MetSeq Primer ...
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bioRxiv - Genomics 2022Quote: ... Sequencing of isolate CDC-SF003 and swab specimens were carried out using the MiSeq v2 (500 cycle) platform following the manufacturer’s recommendations (Illumina, San Diego, CA).
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bioRxiv - Genomics 2022Quote: ... One ng of the pooled amplicons was used for library construction with the Nextera XT DNA library preparation kit (#FC-131–1096; Illumina, San Diego, CA), according to the manufacturer’s instructions ...
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bioRxiv - Bioengineering 2022Quote: ... The rRNA-depleted samples were then processed with the TruSeq mRNA stranded kit from Illumina. Libraries were then sequenced on a Nextseq with 1×76 cycles ...
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bioRxiv - Genomics 2022Quote: ... and used the TruSeq RNA Sample Preparation Kit (Illumina) according to the manufacturer’s instruction ...
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bioRxiv - Immunology 2022Quote: ... 200 ng of total RNA was subsequently used to prepare RNA-Seq library by using TruSeq RNA sample prep kit (Illumina) according to manufacturer’s instructions ...
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bioRxiv - Immunology 2022Quote: ... Paired-end RNA sequencing was performed on a Novaseq 6000 (Illumina) (BRIGHTcore joint facility ...
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bioRxiv - Systems Biology 2022Quote: ... The libraries were sequenced on an Illumina Hiseq 2500 platform (Illumina, Inc.) using single-end 50bp reads ...
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bioRxiv - Developmental Biology 2022Quote: ... The amplified cDNA library was sequenced on a NovaSeq 6000 S2 flow cell from Illumina. The sequenced cell numbers can be found in Table S1.
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bioRxiv - Bioengineering 2022Quote: ... A 250-PE kit was sequenced with 15% phiX at 10 pM concentration using a NextSeq (Illumina). After quality control filtering(40) ...
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bioRxiv - Bioengineering 2022Quote: ... Libraries were sequenced on the Illumina NextSeq platform (Illumina, San Diego, CA) and data was processed with HTG’s parser software ...
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bioRxiv - Cell Biology 2022Quote: ... Then libraries with different indices were multiplexed and loaded on an Illumina Novaseq instrument according to manufacturer’s instructions (Illumina, San Diego, CA, USA). Sequencing was carried out using a 2×150 paired-end (PE ...
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bioRxiv - Evolutionary Biology 2022Quote: ... yakuba strain that was sequenced and assembled using hybrid short-read (Illumina) and long-read (Oxford Nanopore ...
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bioRxiv - Evolutionary Biology 2022Quote: ... we conducted RNA-seq library preparation with 1000 ng of total RNA per tissue sample as input and following the protocol of the Standard TruSeq Stranded mRNA Sample Prep Kit (Illumina) with indexing adapters ...
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bioRxiv - Cell Biology 2022Quote: ... a Hiseq 4000 SR Cluster Kit (Illumina) was used using 8 pM of pooled normalized libraries on the cBOT V2 ...
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bioRxiv - Cell Biology 2022Quote: ... Sequencing was performed on the Illumina HiSeq with single-end 125 bp using the HiSeq 3000/4000 SBS Kit (Illumina). Reads quality was checked with FastQC (https://www.bioinformatics ...
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bioRxiv - Cell Biology 2022Quote: ... The TruSeq Stranded HT mRNA Sample Prep Kit (Illumina) was used in subsequent steps following the manufacturer’s protocol ...
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bioRxiv - Cell Biology 2022Quote: ... an R package designed for statistical analysis of gene counts generated from Illumina-based sequencing ...
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bioRxiv - Cell Biology 2022Quote: ... Paired-end multiplexed sequencing of libraries to generate reads of 100 bp was performed on a HiSeq 1000 instrument with TruSeq SBS and PE Cluster v3 Kits (Illumina); 70–100 million reads per sample were obtained ...
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bioRxiv - Cell Biology 2022Quote: ... Abundance of sgRNAs was quantified post-sequencing on NextSeq500 platform (Illumina). Full results of all CRISPR screens can be found in the supplemental tables S1-S15.
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bioRxiv - Cell Biology 2022Quote: Whole-genome and exome libraries were sequenced on the HiSeq 4000 platform (Illumina) in 151 bp paired-end mode ...
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bioRxiv - Cell Biology 2022Quote: ... Libraries were sequenced on a NextSeq using a Mid Output 150 cycle kit (Illumina Inc.) using 75bp paired end reads.
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bioRxiv - Cell Biology 2022Quote: ... Resulting cDNA was then made into Illumina-compatible libraries using the Nextera XT kit (Illumina Inc). Libraries were sequenced on a NextSeq using a Mid Output 150 cycle kit (Illumina Inc. ...
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bioRxiv - Cell Biology 2022Quote: ... libraries were prepared using the TruSeq Stranded Total RNA Library Prep Kit with Ribo-Zero Human/Mouse/Rat Kit (cat. RS-122-2201/2202, Illumina) according to the manufacturer’s protocol ...
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bioRxiv - Cell Biology 2022Quote: ... LCX or HCX were sequenced by Illumina at Omega Bioservices (Norcross ...
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bioRxiv - Cell Biology 2022Quote: ... libraries were prepared using the TruSeq stranded mRNA Library Prep (cat. 20020595, Illumina) according to the manufacturer’s protocol ...
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bioRxiv - Cell Biology 2022Quote: ... which used a NovaSeq 6000 (Illumina). Sequencing reads were aligned using Bowtie2 (Langmead and Salzberg ...
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bioRxiv - Cell Biology 2022Quote: ... Samples were multiplexed and paired-end sequencing was performed using a MiniSeq (Illumina) or by the Vincent J ...