Labshake search
Citations for Illumina :
7901 - 7950 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2023Quote: ... The library was sequenced using a read length of 250 bp in paired-end mode (HiSeq 3000, Illumina, California, USA). Hi-C library generation for chromosome assembly was carried out according to a protocol adapted from Rao et al ...
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bioRxiv - Microbiology 2023Quote: ... Ribodepletion RNA library and sequencing was performed at the Oxford Genomics Centre using a NovaSeq6000 sequencing system (Illumina). Three biological samples per condition were sequenced ...
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bioRxiv - Genomics 2023Quote: ... Supplementary Table 2) was subjected to whole-genome sequencing by Illumina HiSeq ...
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bioRxiv - Genomics 2023Quote: ... Ribosomal RNA was depleted from 500 ng total RNA using the Illumina Ribo-Zero Plus rRNA Depletion Kit (Illumina, Cat. # 20037135). RNA was converted to cDNA ...
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bioRxiv - Genomics 2023Quote: ... A TruSeq stranded total RNA-seq library with one round of Ribo-Zero Gold kit (Illumina) was prepared from one pooled library consisting of RNA samples from eight tissues (heart ...
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bioRxiv - Genomics 2023Quote: ... We used 15 mins incubation on ice in the nuclei preparation step and the Tn5 reaction was performed in 50 μl of custom transposition buffer (10 mM Tris pH 8, 5 mM MgCl2 and 10% dimethylformamide) with 2.5 μl Tn5 transposase (Illumina, 20034197) at 37°C while mixing at 1000 rpm for 30 mins ...
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bioRxiv - Genomics 2023Quote: ... sc-end5-dT and sc-ATAC-seq libraries were sequenced on HiSeqTM 2500 (Illumina®) as 75bp and 100bp paired-end reads respectively.
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bioRxiv - Genomics 2023Quote: Bulk CAGE libraries were generated by the nAnT-iCAGE (Murata et al., 2014) method as previously described and sequenced on HiSeqTM 2500 (Illumina®) as 50bp single-end reads ...
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bioRxiv - Genomics 2023Quote: ... All libraries were pooled and subjected to paired-end 75 bp sequencing (paired- end 76 nt reads with the first 1 nt of Read 1 and the last 1 nt of Read 2 trimmed) using the NextSeq500 system (Illumina, CA, USA). For each library ...
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bioRxiv - Microbiology 2023Quote: Viral enrichment was performed using the Illumina RNA Prep with the Respiratory Viral Oligo Panel version 2 (RVOP) (Illumina Inc ...
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bioRxiv - Microbiology 2023Quote: ... Resulting libraries were pooled with the aim of generating 1×106 raw reads per specimen and sequenced producing paired 74 base pair reads on the Illumina MiniSeq or iSeq instruments (Illumina Inc ...
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bioRxiv - Microbiology 2023Quote: ... Sequencing libraries were prepared using the Ribo-Zero rRNA Removal Kit (Gram-positive Bacteria) (Illumina Inc., San Diego, CA, United Stated) and the TruSeqStranded mRNA library prep kit (Illumina Inc) ...
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bioRxiv - Microbiology 2023Quote: ... Rapid DNA extraction from microbial isolates was adapted from Köser et al.63 and sequenced as previously described28 on the NovaSeq 6000 Sequencing System (Illumina, San Diego, CA, USA), 2×150bp paired end to approximately 100X coverage per genome ...
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bioRxiv - Genomics 2023Quote: ... and sequenced on a Novaseq6000 instrument (Illumina) to an average depth of 25,000 read pairs per nucleus by The Jackson Laboratory Genome Technologies core service.
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bioRxiv - Microbiology 2023Quote: ... Libraries were prepared using the TruSeq RNA Library Prep Kit v2 (Illumina). Mass sequencing was performed using NextSeq 550 platform with a single-end protocol ...
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bioRxiv - Microbiology 2023Quote: ... using the RiboZERO Kit (Illumina), following the manufacturer’s instructions ...
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bioRxiv - Microbiology 2023Quote: ... The PCR products were used for library construction and sequenced on the NovaSeq PE250 platform (Illumina, San Diego, USA) according to the protocol of Majorbio Bio-Pharm Technology Co ...
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bioRxiv - Microbiology 2023Quote: ... and 100 ng were subjected to the Nextera™ DNA Flex Library Preparation kit (Illumina, San Diego, CA, USA) employing a unique dual indexing (XT-Index Kit V2-Set A) ...
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bioRxiv - Microbiology 2023Quote: ... Depletion of rRNA and cDNA library preparation were performed using lllumina Stranded Total RNA Prep with Ribo-Zero Plus (Illumina). The cDNA libraries were quantified by qPCR followed by sequencing in a NextSeq2000 equipment (Illumina).
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bioRxiv - Microbiology 2023Quote: ... Sequencing using the HiSeq 2500 system (Illumina Inc.—San Diego, CA, USA), with paired-end 125 bp read length ...
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bioRxiv - Microbiology 2023Quote: ... before denaturation of the libraries in preparation for loading into the Illumina V2 cartridge (2×250 bp paired-end reads) and running on an Illumina MiSeq machine (Illumina).
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bioRxiv - Microbiology 2023Quote: ... Whole-genome shotgun sequencing was carried out on an Illumina MiSeq platform using Nextera DNA Flex kits (Illumina, San Diego, CA, USA) with a 150-bp paired-end sequencing kit (Illumina ...
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bioRxiv - Immunology 2023Quote: ... using a NovaSeq 6000 SP Reagent Kit v1.5 (Illumina).
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bioRxiv - Microbiology 2023Quote: ... DNA libraries were prepared with the Illumina DNA prep kit (Illumina GmbH, Munich, Germany) and subjected to Illumina MiSeq 2 × 150 bp paired-end sequencing by Illumina MiSeq.
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bioRxiv - Immunology 2023Quote: ... Sequencing of pooled libraries was carried out on a NextSeq 2000 sequencer (Illumina), using a NextSeq P2 flowcell (Illumina) ...
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bioRxiv - Immunology 2023Quote: ... using a NextSeq P2 flowcell (Illumina), with target depths of 40000 ...
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bioRxiv - Microbiology 2023Quote: ... then diluted to 150 pM in elution buffer supplied in the library prep kit and loaded to the iSeq100 flow cell for sequencing on iSeq100 (Illumina). After the NGS run ...
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bioRxiv - Microbiology 2023Quote: ... and ribosomal RNAs were removed using an Illumina Ribo-zero rRNA depletion kit (Illumina, Inc., San Diego, CA, USA). Quality checking and normalization were conducted using a Kapa Library Quantification kit (Roche ...
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bioRxiv - Genetics 2023Quote: ... and cDNA libraries were constructed by the Illumina TruSeq RNA Library Prep Kit v2 (Illumina, CA, USA). RNA-Seq was implemented on the Illumina HiSeq 2500 (Illumina ...
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bioRxiv - Genetics 2023Quote: ... nucleus tagmentation was performed in Tn5 transposase reaction mix (Illumina Tagment DNA Enzyme and Buffer kits) under incubation at 37 °C for 30 min in a thermomixer with shaking at 1,000 rpm ...
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bioRxiv - Genetics 2023Quote: ... RNA-Seq was implemented on the Illumina HiSeq 2500 (Illumina, CA, USA) at Novegene Co. ...
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bioRxiv - Immunology 2023Quote: ... 8 cycles for i7 index and 61 cycles for read 2) with Novaseq S2 flow cells (100 cycles) using Novaseq 6000 sequencer (Illumina) in the Life and Brain Center ...
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bioRxiv - Genetics 2023Quote: We downloaded RNA sequencing data (Illumina TruSeq) in NAT breast tissue and tumor tissue from TCGA ...
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bioRxiv - Immunology 2023Quote: ... and feature barcoding libraries were pooled and treated with Illumina Free Adapter Blocking Reagent (Illumina). Sequencing of pooled libraries was carried out on a NextSeq 2000 sequencer (Illumina) ...
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Genetic heterogeneity in the Salmonella Typhi Vi capsule locus: A population genomic study from FijibioRxiv - Microbiology 2023Quote: ... Genome sequencing was performed using Illumina Nextera XT (Illumina, California, USA) on the Illumina NextSeq 500/550 platform using 150 paired-end reads ...
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bioRxiv - Immunology 2023Quote: Raw FASTQ data files (Illumina HiSeq 2500 single read) were downloaded from the Gene Expression Omnibus (GSE:131364) ...
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bioRxiv - Immunology 2023Quote: ... Samples were pooled at equimolar concentration and ran on a MiSeq (Illumina) with a MiSeq Reagent Kit v3 (600-cycle ...
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bioRxiv - Microbiology 2023Quote: ... Prepared libraries were sequenced on the MiSeq Personal Sequencer (Illumina, USA) using the 2 × 300 bp MiSeq Reagent Kit v3 ...
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bioRxiv - Genomics 2023Quote: ... The library was sequenced on the NextSeq sequencer (Illumina).
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bioRxiv - Biochemistry 2023Quote: ... with Ribo-zero rRNA depletion (Illumina). Sequencing was outsourced to Macrogen Inc ...
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bioRxiv - Systems Biology 2023Quote: ... before shipping to a commercial service provider for paired end sequencing on a HiSeq 3000 (Illumina). The average sequencing depth was 9.9 Gbases per sample.
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bioRxiv - Molecular Biology 2023Quote: ... SSDS libraries were amplified during 15 cycles of PCR using TruSeq DNA Nano LP (Illumina, 20016328), purified with AMPureXP beads (Beckman Coulter ...
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bioRxiv - Systems Biology 2023Quote: ... the library was prepared using the TruSeq ChIP Library Preparation Kit (Illumina), and 36-bp single-end sequencing of the libraries was processed with a HiSeq3000 system (Illumina).
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bioRxiv - Systems Biology 2023Quote: ... and 36-bp single-end sequencing of the libraries was processed with a HiSeq3000 system (Illumina).
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bioRxiv - Cancer Biology 2023Quote: ... Each library was sequenced to a minimum of 40 million clusters or 80 million 150bp paired-end reads on a NovaSeq 6000 instrument (Illumina) at the University of Colorado Cancer Center Genomics Shared Resource.
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bioRxiv - Biophysics 2023Quote: ... Samples were sequenced on the NextSeq 500 instrument (Illumina, San Diego, USA) using a 43bp paired end run resulting in ¿15 million reads per sample ...
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bioRxiv - Cancer Biology 2023Quote: ... Basecalls were converted to fastq files using bcl2fastq (Illumina). Fastq files were trimmed for adapter sequences using the autodetect feature in trim_galore (version 0.6.5 ...
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bioRxiv - Bioengineering 2023Quote: ... The FASTQ files that were generated from the sequencing were demultiplexed using the bcl2fastq v2.20 Conversion Software (Illumina). The quality of the demultiplexed FastQ files was then evaluated using FastQC (version 0.11.9).
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bioRxiv - Cancer Biology 2023Quote: ... Bacterial 16S rRNA gene V1-V2 region was amplified using 27F and 338R PCR primers and sequenced on a MiSeq (2×250 bp; Illumina, Hayward, CA). Bioinformatic processing and statistical analysis were performed in R software environment as described previously 62 ...
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bioRxiv - Microbiology 2023Quote: ... respectively (Illumina). Template-matching regions in the primers are underlined ...