Labshake search
Citations for Illumina :
7751 - 7800 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2023Quote: ... Libraries were sequenced on the MiSeq System with the MiSeq Reagent Kit v3 (Illumina, Catalog No. MS-102-3003). All MiSeq runs were performed with a run configuration of 2 x 251 cycles for PNA blocker PCR samples (see next section ...
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bioRxiv - Microbiology 2023Quote: ... Library preparation was done according to Illumina amplicon protocol (Illumina) (Table S1 ...
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bioRxiv - Genomics 2023Quote: ... and sequenced on Illumina NovaSeq 6000 platform (Illumina, San Diego, CA, USA) in 2×150bp sequencing mode ...
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bioRxiv - Genomics 2023Quote: ... Library preparations of RNA were sequenced on the Illumina NovaSeq 6000 platform (Illumina Inc, USA) or MGISEQ-2000 platform (BGI-Shenzhen ...
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bioRxiv - Immunology 2023Quote: ... Samples were prepared using an Illumina Stranded mRNA library prep kit (Illumina) with the addition of IDT for Illumina DNA/RNA UD indexes (Illumina) ...
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bioRxiv - Immunology 2023Quote: ... 3mM MgCl2) on ice and resuspended in 10μl of transposition mix (1X TD Buffer from Illumina, Transposase from Illumina ...
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bioRxiv - Genetics 2023Quote: ... for cluster generation using the TruSeq™ PE Cluster Kit (Illumina) and sequenced with the TruSeq™ SBS Kit (Illumina ...
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bioRxiv - Genetics 2023Quote: ... Non-overlapping unique dual indexes (Illumina #20022371) were then added to each reaction and ligated according to manufacturer instructions ...
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bioRxiv - Immunology 2023Quote: ... Samples were run on a NovaSeq 6000 (Illumina). An average of 64 million paired reads were generated per sample ...
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bioRxiv - Immunology 2023Quote: ... Illumina fastq files were downloaded from Illumina Basespace and were aligned with Kallisto v0.46.1 using the “-b 100 and -t 20” options to obtain transcript abundances in transcripts per million (TPM ...
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bioRxiv - Immunology 2023Quote: ... or HiSeq 3000/4000 SBS Kit (Illumina). An average of 100 million paired reads were generated per sample.
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bioRxiv - Developmental Biology 2023Quote: ... and library preparation for transcriptome profiling (Novozyme, TruePrep DNA Library Prep Kit V2 for Illumina, TD-503). Next generation sequencing was performed on the Illumina Hiseq 2500 or Novaseq platform (Berry Genomics).
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bioRxiv - Cancer Biology 2023Quote: ... followed by deep sequencing using NovaSeq for paired-end minimum length 75 bp read (Illumina). Sequencing data were analyzed using MAGeCK-VISPR 76.
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bioRxiv - Biochemistry 2023Quote: ... and the indexed libraries were prepared from 1 μg of purified RNA with TruSeq-stranded mRNA (Illumina) Library Prep Kit according to the manufacturer’s instructions ...
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bioRxiv - Plant Biology 2023Quote: ... Gf.43-21 and 65-153-18 were sequenced 2x150 bp paired-end on an Illumina NextSeq-500 (Illumina, San Diego, USA). Illumina NGS libraries were created following the TruSeq DNA Sample Preparation v2 Guide ...
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bioRxiv - Molecular Biology 2023Quote: ... The reverse oligonucleotides also contain barcode sequences for multiplexing according to the TruSeq v1/v2/LT protocol (Illumina). Sequencing libraries were obtained from 12–16 cycles of PCR using 0.02 μM long NGS adapter oligonucleotides (forward and reverse ...
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bioRxiv - Genomics 2023Quote: ... and 2.5μl of each Index primer i7 (Illumina, FC-1312001/2002) and Index primer i5 (Illumina ...
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bioRxiv - Plant Biology 2023Quote: ... and 1.5 ug RNA was used for library preparation at the High-throughput Sequencing Facility at UNC Chapel Hill using the Stranded mRNA-Seq kit (Kapa Biosystems. The NovaSeq 6000 sequencer (Illumina) generated 50bp paired-end reads with a read depth of 23-35 million reads per biological replicate ...
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bioRxiv - Molecular Biology 2023Quote: ... Strand-specific libraries were prepared using a TruSeq RNA Sample Preparation Kit (Illumina) and the dUTP method ...
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bioRxiv - Biochemistry 2023Quote: ... Library pools were mixed with Illumina PhiX control libraries and sequenced using the Illumina MiSeq or HiSeq platforms (Illumina, San Diego, CA, USA) at JAMSTEC or Macrogen (Seoul ...
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bioRxiv - Molecular Biology 2023Quote: ... and approximately 10 million reads were obtained by Illumina sequencing ...
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bioRxiv - Microbiology 2023Quote: ... and indexed using Nexterra XT index kit v2 (Illumina Inc., San Diego, California, USA). Libraries were pooled using the Illumina library pooling calculator (https://support.illumina.com/help/pooling-calculator/pooling-calculator.htm ...
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bioRxiv - Microbiology 2023Quote: ... mutans UA159 and GMS584 mid-logarithmic phase cultures using the TruSeq Small RNA Library Prep Kit (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Cell Biology 2023Quote: ... The libraries were sequenced on a HiSeqX (Illumina), 50PE (2x 150bp) ...
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bioRxiv - Molecular Biology 2023Quote: ... The final PCR products were submitted for next generation sequencing using NovaSeq SP PE250 (Illumina).
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bioRxiv - Neuroscience 2023Quote: ... A 75-nt single-read sequencing run on this combined pool was performed on the Illumina MiSeq® sequencer (Illumina) at Penn State Genomics Core Facility ...
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bioRxiv - Molecular Biology 2023Quote: ... coli transposition assays were mixed with 5 µL of tagmentation DNA buffer (Illumina) and 1 µL of amplicon tagmentation mix (Illumina ...
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bioRxiv - Molecular Biology 2023Quote: ... PCR adapters from the Illumina Nextera DNA prep kit (Illumina) were selected and added to each sample along with PCR master mix ...
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bioRxiv - Molecular Biology 2023Quote: Secondary processing and demultiplexing of data were done within the sequencing facility with Bcl2fastq 2_2.20.0 (Illumina). Identification of the small RNAs was further done using the tinyRNA pipeline (tinyRNA-1.0.1)33 following the standard parameters ...
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bioRxiv - Molecular Biology 2023Quote: Two μg of DNA was used to prepare 350-bp-insert libraries for 150-bp paired-end sequencing (Novogene Biotech, Beijing, China) on an Illumina HiSeq 2500 system (Illumina, San Diego, USA) with standard Illumina protocols ...
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bioRxiv - Cancer Biology 2023Quote: ... the TruSight Oncology 500 (TSO) assay developed by Illumina, and the Oncomine assay developed by ThermoFisher Scientific ...
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bioRxiv - Cancer Biology 2023Quote: ... A library was prepared with 100 ng of total RNA for each sample using the TruSeq RNA Access library prep kit (Illumina, CA, USA). Subsequently ...
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bioRxiv - Cancer Biology 2023Quote: ... Sequencing was performed on a NovaSeq 6000 (Illumina) in paired-end (PE 26/96 bp ...
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bioRxiv - Cancer Biology 2023Quote: ... Libraries were prepared using 100–500 ng total RNA with TruSeq Stranded RNA Sample Preparation Kit (Illumina, v2) according to the manufacturer’s protocol ...
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bioRxiv - Cancer Biology 2023Quote: ... libraries were made using the Illumina TruSeq RNA library Prep Kit (Illumina, CA, USA). Libraries were quantified using the KAPA Library Quantification kit (KAPA Biosystems ...
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bioRxiv - Cancer Biology 2023Quote: We generated RNA-seq data from the H1299 non-small cell lung cancer cell line with 108,321,106 reads (TrueSeq RNA v2 100 bp paired-end library and Illumina HiSeq2500 machine from Illumina ...
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bioRxiv - Genomics 2023Quote: ... Final libraries were run on three NextSeq500 High-output v2.5 150-cycle kits (Illumina, CA) with a 26[8]98 cycle configuration to generate 50,000 reads per cell (10X Genomics recommendation).
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bioRxiv - Developmental Biology 2023Quote: ... The clustering of the index-coded samples was performed by Novogene on a cBot Cluster Generation System using PE Cluster Kit cBot-HS (Illumina). Paired-end clean reads were mapped to the reference genome using HISAT2 software and for samples with biological replicates ...
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bioRxiv - Cell Biology 2023Quote: ... WGBS libraries were sequenced on a NovaSeq 6000 (Illumina) using a NovaSeq 6000 SP Reagent Kit (Illumina ...
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bioRxiv - Microbiology 2023Quote: ... Libraries were pooled and run as 75-cycle-paired end reads on a NextSeq 550 (Illumina) using a high-output flow cell ...
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bioRxiv - Bioengineering 2023Quote: ... The PCR products were purified with magnetic beads (Berkeley Sequencing Core Facility) before being subjected to next-generation sequencing (NGS) with MiSeq (Illumina) at 2x300 bp with a depth of at least 20,000 reads per sample ...
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bioRxiv - Developmental Biology 2023Quote: ... Approximately 300 ng of RNA was used for library prep (NEBNext® Ultra™ II Directional RNA Library Prep Kit for Illumina) following standard kit procedure ...
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bioRxiv - Developmental Biology 2023Quote: ... Sequencing was performed on a Nextseq500/550 High Output Kit v2.5 75 cycles (Illumina; paired-end sequencing), and each sample was sequenced for 6M reads ...
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bioRxiv - Genetics 2023Quote: ... and cDNA libraries were constructed by the Illumina TruSeq RNA Library Prep Kit v2 (Illumina, CA, USA). RNA-Seq was implemented on the Illumina HiSeq 2500 (Illumina ...
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bioRxiv - Genetics 2023Quote: ... nucleus tagmentation was performed in Tn5 transposase reaction mix (Illumina Tagment DNA Enzyme and Buffer kits) under incubation at 37 °C for 30 min in a thermomixer with shaking at 1,000 rpm ...
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bioRxiv - Genetics 2023Quote: ... RNA-Seq was implemented on the Illumina HiSeq 2500 (Illumina, CA, USA) at Novegene Co. ...
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bioRxiv - Molecular Biology 2023Quote: ... Sequencing libraries were generated using Phusion DNA polymerase with TruSeq small-RNA adaptors and sequenced at NOVOGene USA using NextSeq500 (Illumina).
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bioRxiv - Cell Biology 2023Quote: ... Libraries were prepared from 1 µg of input DNA using a TruSeq DNA Sample Prep Kit according to the manufacturer’s instructions (Illumina, Inc., San Diego, CA, USA). The sheared DNA fragments underwent end-repair ...
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bioRxiv - Cell Biology 2023Quote: ... The sample single-nucleus RNA-seq libraries were then sequenced using HiSeqX and NovaSeq sequencers (Illumina). CellRanger (v6.0.0 ...
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bioRxiv - Cell Biology 2023Quote: ... Pooled and indexed DNA was sequenced using a MiSeq 600 cycle kit (Illumina MS-102-3003) reading 374 cycles in read1 and 235 cycles in read2 ...