Labshake search
Citations for Illumina :
7301 - 7350 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2023Quote: ... Illumina libraries were prepared with the Nextera DNA Flex Library Prep Kit (Illumina, 20018704) along with the Nextera DNA CD Indexes (Illumina ...
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bioRxiv - Microbiology 2023Quote: ... Skin: cDNA libraries were prepared using the Illumina Stranded Total RNA Prep with Ribo-Zero Plus Kit (Illumina 20040529) with IDT for Illumina RNA UD Indexes ...
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bioRxiv - Molecular Biology 2023Quote: ... Libraries were prepared according to the standard protocol recommended by Illumina (Illumina, CA, USA). Index PCR was used to add the unique dual indexes to the sequences ...
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bioRxiv - Molecular Biology 2023Quote: ... Raw reads from Illumina sequencing were subjected to adaptor trimming and filtering of low-quality reads by Fastp (version 0.12.3) ...
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bioRxiv - Microbiology 2023Quote: ... Library preparation performed using Nextera XT (Illumina Inc.) according to manufacturer’s instructions ...
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bioRxiv - Microbiology 2023Quote: ... Extracted DNA was adjusted to a concentration of 0.2 ng/μL and treated using the Nextera XT DNA library preparation kit (Illumina) to produce fragments of approximately 500 bp ...
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bioRxiv - Microbiology 2023Quote: ... Reverse primers contained i7 indexes from the TruSeq DNA PCR Free kit (Illumina). PCR reactions were run on agarose gels to verify amplification ...
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bioRxiv - Microbiology 2023Quote: ... the amplified DNA products were sequenced by next-generation sequencer Miseq (Illumina). Gut microbiome profile was analyzed by Qiime2 (version 2021.11) ...
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bioRxiv - Immunology 2023Quote: ... All libraries were sequenced on a HiSeq X Ten sequencer (Illumina). After pre-processed using FastQC (v0.11.9) ...
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bioRxiv - Immunology 2023Quote: ... using the TruSeq SBS Kit v4 (Illumina). An average of 42 million paired reads were generated per sample and the percent of mRNA bases per sample ranged from 73% to 84%.
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bioRxiv - Immunology 2023Quote: ... RNA libraries were prepared from a starting quantity of 100 ng high quality RNA using the TruSeq RNA Library Prep Kit v2 (Illumina Inc., San Diego, CA, USA). All RNA samples used for transcriptomic analysis (n = 6 per group ...
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bioRxiv - Microbiology 2023Quote: ... and the genome of a selected colony was completely sequenced by Illumina. The phenotype of the MDS42::TraW strains was checked by culturing in a chromogenic medium (agar BrillianceTM ...
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bioRxiv - Genetics 2023Quote: ... 2.5 μL Tn5 Transposase (Illumina, cat #FC-121-1030), 22.5 μL Nuclease Free Water (Thermo Fisher Scientific ...
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bioRxiv - Evolutionary Biology 2023Quote: We sequenced 23 strains of Saccharomycopsis by Illumina technology ...
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bioRxiv - Microbiology 2023Quote: ... 51-bp Single Read sequences were generated on the Hiseq2000 sequencer according to manufacturer’s instructions (Illumina). Reads were processed ...
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bioRxiv - Microbiology 2023Quote: ... Directional libraries were prepared using the TruSeq Stranded mRNA Sample preparation kit (20020595) following the manufacturer’s instructions (Illumina). 51-bp Single Read sequences were generated on the Hiseq2000 sequencer according to manufacturer’s instructions (Illumina) ...
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bioRxiv - Microbiology 2023Quote: ... and colonising (clinical non-CAPA) (C402, C404-C407, C409, C410) isolates from the Netherlands (n=9) were sequenced using NextSeq 550 sequencer (Illumina), and 218 UK and Irish isolates and the five IA isolates (C307 ...
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bioRxiv - Microbiology 2023Quote: ... split by Illumina barcode ...
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bioRxiv - Microbiology 2023Quote: ... Amplicons were sent to Genewiz for next generation sequencing by Illumina MiSeq technology with 30% added Phi-X DNA.
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bioRxiv - Microbiology 2023Quote: ... along with 10% PhiX v3 library (Illumina; San Diego, CA), were pooled and clustered on a Illumina NovaSeq 6000 S2 flow cell followed by 150-bp paired-end sequencing.
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bioRxiv - Microbiology 2023Quote: ... allowing the mixing of samples from different individuals when sequencing PCR products using NextSeq sequencers (Illumina). Sequenced reads were separated by barcode ...
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bioRxiv - Microbiology 2023Quote: ... and the samples were sequenced using MySeq PE300 (Illumina®, USA) by MR DNA (www.mrdnalab.com ...
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bioRxiv - Microbiology 2023Quote: ... on an Illumina NextSeq 550 sequencer (Illumina; SY-415-1002). A Q score of ≥30 was presented in at least 95% of the sequencing reads generated.
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bioRxiv - Microbiology 2023Quote: ... Next-generation sequencing was performed by the P2M facility at Institut Pasteur using the Nextera XT DNA Library Preparation kit (Illumina), the NextSeq 500 sequencing systems (Illumina ...
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bioRxiv - Evolutionary Biology 2023Quote: ... NGS libraries were sequenced on an Illumina HiSeq platformm (Illumina, CA, USA) for twelve Populus species (Extended Data Fig ...
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bioRxiv - Microbiology 2023Quote: ... contaminants (PhiX control V3 library, Illumina) were filtered and low quality ends were clipped off with BBDuk (39) ...
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bioRxiv - Microbiology 2023Quote: ... (https://microbiomeinsights.com/) using an Illumina Nextera library preparation kit using their in-house protocol (Illumina, San Diego, CA, USA).
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bioRxiv - Microbiology 2023Quote: ... Libraries were prepared following the amplicon protocol which includes the use of indexes from the Nextera XT Index Kit v2 (Illumina). Library preparation was done according to Illumina amplicon protocol (Illumina ...
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bioRxiv - Microbiology 2023Quote: ... all libraries were spiked with 5% PhiX Control v3 (Illumina, Catalog No. FC-110-3001). The NCBI Genbank accession number for the raw sequencing data reported here is PRJNA999749.
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bioRxiv - Microbiology 2023Quote: ... Libraries were sequenced on the MiSeq System with the MiSeq Reagent Kit v3 (Illumina, Catalog No. MS-102-3003). All MiSeq runs were performed with a run configuration of 2 x 251 cycles for PNA blocker PCR samples (see next section ...
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bioRxiv - Microbiology 2023Quote: ... Library preparation was done according to Illumina amplicon protocol (Illumina) (Table S1 ...
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bioRxiv - Genomics 2023Quote: ... and sequenced on Illumina NovaSeq 6000 platform (Illumina, San Diego, CA, USA) in 2×150bp sequencing mode ...
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bioRxiv - Genomics 2023Quote: ... Library preparations of RNA were sequenced on the Illumina NovaSeq 6000 platform (Illumina Inc, USA) or MGISEQ-2000 platform (BGI-Shenzhen ...
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bioRxiv - Immunology 2023Quote: ... Samples were prepared using an Illumina Stranded mRNA library prep kit (Illumina) with the addition of IDT for Illumina DNA/RNA UD indexes (Illumina) ...
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bioRxiv - Immunology 2023Quote: ... 3mM MgCl2) on ice and resuspended in 10μl of transposition mix (1X TD Buffer from Illumina, Transposase from Illumina ...
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bioRxiv - Genetics 2023Quote: ... for cluster generation using the TruSeq™ PE Cluster Kit (Illumina) and sequenced with the TruSeq™ SBS Kit (Illumina ...
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bioRxiv - Genetics 2023Quote: ... Non-overlapping unique dual indexes (Illumina #20022371) were then added to each reaction and ligated according to manufacturer instructions ...
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bioRxiv - Immunology 2023Quote: ... Samples were run on a NovaSeq 6000 (Illumina). An average of 64 million paired reads were generated per sample ...
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bioRxiv - Immunology 2023Quote: ... Illumina fastq files were downloaded from Illumina Basespace and were aligned with Kallisto v0.46.1 using the “-b 100 and -t 20” options to obtain transcript abundances in transcripts per million (TPM ...
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bioRxiv - Immunology 2023Quote: ... or HiSeq 3000/4000 SBS Kit (Illumina). An average of 100 million paired reads were generated per sample.
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bioRxiv - Developmental Biology 2023Quote: ... and library preparation for transcriptome profiling (Novozyme, TruePrep DNA Library Prep Kit V2 for Illumina, TD-503). Next generation sequencing was performed on the Illumina Hiseq 2500 or Novaseq platform (Berry Genomics).
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bioRxiv - Cancer Biology 2023Quote: ... followed by deep sequencing using NovaSeq for paired-end minimum length 75 bp read (Illumina). Sequencing data were analyzed using MAGeCK-VISPR 76.
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bioRxiv - Biochemistry 2023Quote: ... and the indexed libraries were prepared from 1 μg of purified RNA with TruSeq-stranded mRNA (Illumina) Library Prep Kit according to the manufacturer’s instructions ...
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bioRxiv - Plant Biology 2023Quote: ... Gf.43-21 and 65-153-18 were sequenced 2x150 bp paired-end on an Illumina NextSeq-500 (Illumina, San Diego, USA). Illumina NGS libraries were created following the TruSeq DNA Sample Preparation v2 Guide ...
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bioRxiv - Molecular Biology 2023Quote: ... The reverse oligonucleotides also contain barcode sequences for multiplexing according to the TruSeq v1/v2/LT protocol (Illumina). Sequencing libraries were obtained from 12–16 cycles of PCR using 0.02 μM long NGS adapter oligonucleotides (forward and reverse ...
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bioRxiv - Genomics 2023Quote: ... and 2.5μl of each Index primer i7 (Illumina, FC-1312001/2002) and Index primer i5 (Illumina ...
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bioRxiv - Plant Biology 2023Quote: ... and 1.5 ug RNA was used for library preparation at the High-throughput Sequencing Facility at UNC Chapel Hill using the Stranded mRNA-Seq kit (Kapa Biosystems. The NovaSeq 6000 sequencer (Illumina) generated 50bp paired-end reads with a read depth of 23-35 million reads per biological replicate ...
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bioRxiv - Cell Biology 2023Quote: ... and then sequenced in a paired-ended manner using the NextSeq 500 (Illumina) according to standard Illumina protocols.
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bioRxiv - Genomics 2023Quote: RNA-seq library preparation was performed using TruSeq Stranded mRNA kit (Illumina) according to the manufacturer’s instructions ...
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bioRxiv - Genetics 2023Quote: ... The products were pooled as equimolar and subjected to deep sequencing using MiniSeq (Illumina). Amplicons were sequenced using paired-end ∼150 bp reads on Illumina HiSeq and MiniSeq instruments ...