Labshake search
Citations for Illumina :
7401 - 7450 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Cell Biology 2023Quote: ... according to manufacturer’s instructions and sequenced using the HiSeq-2500 platform (Illumina).
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bioRxiv - Bioengineering 2023Quote: ... Coates Genomics Sequencing Laboratory at UC Berkeley using the 300 PE MiSeq platform and TruSeq SBS Kit v3-HS (Illumina, San Diego, CA). Illumina FASTQ files were demultiplexed ...
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bioRxiv - Cancer Biology 2023Quote: With the exception for Whole Transcriptome Amplification Analysis (WTA)7 (sent to Novogene and sequenced on a S4 flowcell of an Illumina Novaseq), all single-cell or bulk sequencing was prepared as ready-made libraries and sequenced either on Illumina Novaseq or Nextseq 500 instruments at the Functional Genomics Center Zurich ...
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bioRxiv - Cancer Biology 2023Quote: ... The PCR products were then purified and sequenced on a NextSeq 500 (Illumina) (Primer sequences are annotated in Table S5 ...
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bioRxiv - Cancer Biology 2023Quote: ... 75 bp single-end reads were sequenced on a Nextseq instrument (Illumina). Reads were aligned by bwa-mem2 (v2.2.1 ...
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bioRxiv - Biochemistry 2023Quote: ... Microbial composition was determined by sequencing the V3V4 region of the 16S ribosomal gene using a MiSeq platform (Illumina, USA). The sequence library was constructed according to the Illumina library preparation protocol with minor differences to the V3V4 protocol ...
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bioRxiv - Developmental Biology 2023Quote: ... Sample indexes and P7 primers (Illumina) were ligated during library construction using the following PCR protocol ...
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bioRxiv - Developmental Biology 2023Quote: ... The libraries were sequenced on the NovaSeq system (Illumina) using the NovaSeq® 6000 S4 Kits v1.5 (35 cycles ...
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bioRxiv - Cell Biology 2023Quote: ... and sequencing of cDNA libraries was performed using the NextSeq 550 system (Illumina). HCEC and End1 libraries were prepared as described previously 12.
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bioRxiv - Cancer Biology 2023Quote: ... Sequencing libraries were prepared using Nextera XT DNA library preparation kit (Illumina) per manufacturer’s instruction ...
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bioRxiv - Cancer Biology 2023Quote: ... Sequencing was performed on a Novaseq machine (Illumina) using the Novaseq S1 Kit (100 cycles).
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Mitochondrial Apolipoprotein MIC26 is a metabolic rheostat regulating central cellular fuel pathwaysbioRxiv - Cell Biology 2023Quote: ... Bead purified libraries were normalized and finally sequenced on the NextSeq2000 system (Illumina Inc. San Diego, CA, USA) with a read setup of 1×100 bp ...
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bioRxiv - Developmental Biology 2023Quote: ... and next-generation sequencing (Hiseq, Illumina, USA). We analyzed the data with our established pipeline46,47 and confirmed the GLI2 variant (p.P1554L ...
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bioRxiv - Developmental Biology 2023Quote: ... The nuclei were subjected to a transposition reaction with Illumina’s Tagment DNA TDE1 Enzyme and Buffer Kit (Illumina, 20034197) at 37°C for 30 minutes ...
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bioRxiv - Molecular Biology 2023Quote: ... Sequencing was carried out on the NovaSeq 6000 instrument from Illumina based on a 2*100 cycle mode (paired-end reads ...
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bioRxiv - Molecular Biology 2023Quote: ... 50 bp sequencing using the HiSeq 2500 machine (Illumina). Read 1 was read with primer HP6 (Illumina ...
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bioRxiv - Microbiology 2023Quote: ... A DNA library was prepared with the Nextera XT DNA Sample Prep Kit (Illumina, USA), followed by sequencing with the Illumina MiSeq Reagent Kit v2 ...
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bioRxiv - Immunology 2023Quote: ... Raw sequence data (.bcl files) generated from Illumina HiSeq was converted into fastq files and de-multiplexed using Illumina bcl2fastq program version 2.20 ...
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bioRxiv - Immunology 2023Quote: ... The library was then denatured and diluted to 1.2 pM according to standard Illumina’s protocols (for 4 nM libraries) and was spiked with 22% of 20 pM PhiX control (Illumina, cat. no: FC-110-3001). The 1.2 pM library was sequenced on the NextSeq using the NextSeq 500/550 Mid Output Kit v2.5 (300 Cycles ...
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bioRxiv - Immunology 2023Quote: ... and clustering were performed using the TruSeq RNA-Seq Sample Prep v2 Guide (Illumina, Part # 15026495 Rev F) using the Low Sample Protocol ...
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bioRxiv - Plant Biology 2023Quote: ... sequencing was performed as in (Urich et al., 2015) with slight modification and sequenced on an Illumina HiSeq 2500 (Illumina, Inc., San Diego, California, USA) with 150 base pair (bp ...
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bioRxiv - Plant Biology 2023Quote: ... RNA-seq libraries were sequenced on a HiSeq 1500 (Illumina) using paired-end 42 bp format ...
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bioRxiv - Evolutionary Biology 2023Quote: ... The Nextera XT Sample Prep kit (Illumina) and Nextera XT Index kit v2 (Illumina ...
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bioRxiv - Evolutionary Biology 2023Quote: ... We prepared the remaining culture for DNA isolation and Illumina sequencing (see Illumina Sequencing).
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bioRxiv - Evolutionary Biology 2023Quote: ... Sequencing of the amplicons of the V3-V4 hypervariable region (341f/806r) was conducted using the Illumina MiSeq platform (Illumina, USA) with 2x 300-bp paired-end read settings at the IKMB.
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bioRxiv - Evolutionary Biology 2023Quote: ... 6-digit index primers (Illumina RNA PCR Index Primers RPI1-RPI28) were used instead of 10-digit index primers suggested by the LM-Seq protocol ...
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bioRxiv - Physiology 2023Quote: ... The cDNA sequencing libraries were prepared using a TruSeq Stranded mRNA Library Prep Kit (Illumina, San Diego, USA) according to the manufacturer’s instructions ...
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bioRxiv - Neuroscience 2023Quote: ... 500 ng of RNA was used as an input and libraries were prepared using the TruSeq Stranded mRNA library preparation kit from Illumina. The samples were sequenced on the NovaSeq 600 platform on the NovaSeq S4 300 cycle flowcell to generate 150 bp paired-end reads ...
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bioRxiv - Neuroscience 2023Quote: Data were demultiplexed and fastq files were generated using bcl2fastq (v2.20.0.422, Illumina) with parameter “--barcode-mismatches” set to 1 ...
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bioRxiv - Neuroscience 2023Quote: ... Samples were then sequenced on the NovaSeq 6000 (Illumina) instrument with single-end ...
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bioRxiv - Neuroscience 2023Quote: ... The pellet was resuspended in 50 μl of transposition mixture (25 μl of 2× Illumina Tagment DNA buffer ...
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bioRxiv - Neuroscience 2023Quote: ... An initial PCR amplification was performed on the tagmented DNA using Nextera indexing primers (Illumina). Real-time (RT)-qPCR was run with a fraction of the tagmented DNA to determine the number of additional PCR cycles needed ...
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bioRxiv - Molecular Biology 2023Quote: ... Ribosomal RNA depletion was performed with the RiboZero Gold kit (Illumina), and libraries were constructed using the SmarterStranded V2 kit (Takara Bio) ...
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bioRxiv - Molecular Biology 2023Quote: ... 50 μL of transposase mix with 2.5 μL of Tn5 transposase (Illumina, San Diego, CA) were added and incubated for 30 min at 37°C ...
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bioRxiv - Neuroscience 2023Quote: ... Reads were trimmed using the Trimmomatic tool (Illumina), and then aligned to the mouse genome using Top-Hat (Illumina ...
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bioRxiv - Neuroscience 2023Quote: ... We produced libraries for 31-mRNA sequencing using 200 ng of purified RNA per sample processed with a TruSeq Stranded RNA Kit (Illumina, San Diego, CA) according to the manufacturer’s protocol ...
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bioRxiv - Neuroscience 2023Quote: ... Libraries were pooled and quantified using qPCR and were then sequenced on one S Prime (SP) lane for 101 cycles from one end of the fragments on a NovaSeq 6000 (Illumina). FASTQ files were generated from the raw sequencing runs and demultiplexed with the bcl2fastq v2.20 Conversion Software (Illumina) ...
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bioRxiv - Molecular Biology 2023Quote: ... Libraries were prepared from 1 μg of RNA using the TruSeq Stranded mRNA library prep kit (Illumina) following the reference guide ...
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bioRxiv - Pharmacology and Toxicology 2023Quote: ... and quantified using qPCR (KAPA Biosystems Library Quantification Kit for Illumina platforms).
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bioRxiv - Physiology 2023Quote: ... and sequenced on the MiSeq platform (Illumina) as described previously (51 ...
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bioRxiv - Physiology 2023Quote: ... The cDNA library was sequenced with a HiSeq 2500 (Illumina, USA) with single end ...
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bioRxiv - Physiology 2023Quote: ... 500 ng total RNA from each sample were used to make library according to the product guide of stranded mRNA library kit (E4720L; NEBNext Ultra™ Directional RNA Library Prep Kit for Illumina). In short ...
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bioRxiv - Neuroscience 2023Quote: ... CASAVA base recognition was used to transform the original raw data from Illumina to sequenced reads ...
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bioRxiv - Neuroscience 2023Quote: ... RNA was sequenced using a NovaSeq Reagent Kit v1.5_150×150 bp (100 M read-pairs) Sequencing (Illumina Inc, San Diego CA, USA) and sequencing libraries were prepared using Illumina TruSeq Stranded Total RNA Library Prep Ribo-Zero Gold kit (Illumina) ...
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bioRxiv - Neuroscience 2023Quote: ... rRNA depletion library preparation was used for neurons followed by Illumina 2 x 150 bp sequencing ...
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bioRxiv - Neuroscience 2023Quote: Nextera XT DNA Sample Prep Kit (Illumina FC-131-1096) was used at 1/10 of recommendation volume ...
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bioRxiv - Cancer Biology 2023Quote: ... The Columbia Sulzberger Genome Center sequenced the RNA samples (mm10, Illumina iGenomes) and Tophat2 was used to map the reads ...
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bioRxiv - Cancer Biology 2023Quote: ... quality checked at Agilent 2100 Bioanalyzer and 50 bp paired-end sequenced on an HiSeq 2000 Sequencing System (Illumina). RNA-seq reads were aligned to genome (hg19 ...
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bioRxiv - Cancer Biology 2023Quote: ... ATAC was performed as previously described27 using the Tagment DNA TDE1 Enzyme (Illumina, 20034198). Sequencing libraries were prepared using the ThruPLEX DNA-Seq Kit (Takarabio ...
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bioRxiv - Cancer Biology 2023Quote: CUT & RUN libraries were prepared using the TruSeq ChIP-Sample Prep Kit-Set A and PCR Box (Illumina) from 5 ng of DNA with 10 PCR cycles for amplification following the manufacturer’s procedures ...