Labshake search
Citations for Illumina :
7451 - 7500 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Immunology 2023Quote: ... Paired-end sequencing libraries were prepared from amplified cDNA with the Nextera XT DNA sample Prep Kit (Illumina, #FC-131) according to the manufacturer’s instructions ...
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bioRxiv - Genomics 2023Quote: ... Libraries were then prepared for sequencing and sequenced on paired-end 150 bp mode on NovaSeq 6000 (Illumina, San Diego, CA).
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bioRxiv - Genomics 2023Quote: We sequenced scRNA-seq and spatial barcode libraries on an Illumina Nextseq 1000 instrument using a p2 100 cycle kit (Illumina, 20046811). For some libraries ...
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bioRxiv - Genomics 2023Quote: ... RNA-seq libraries were prepared with the TruSeq Stranded RNA Lib Prep Kit (Illumina, San Diego, CA) and quantified by qPCR using the KAPA Library Quantification Kit for Illumina Libraries (KapaBiosystems ...
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bioRxiv - Genomics 2023Quote: ... The libraries were prepared using the NEXTflex Rapid DNA-seq kit (Illumina) and sequenced on a Hiseq-4000 platform with 2 × 50 bp paired end reads ...
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bioRxiv - Immunology 2023Quote: ... and 1 μl of Unique dual indexes primers (Illumina, USA). The amplification profile was as follows ...
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bioRxiv - Microbiology 2023Quote: ... Samples were normalized and pooled onto a 150 paired end run on NovaSeq (Illumina, CA, USA) to obtain 50M reads per sample ...
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bioRxiv - Microbiology 2023Quote: ... A sequencing library for the V3-V4 regions of the 16S rRNA gene was prepared according to a modified version of the instructions provided by the manufacturer (Part # 15044223 Rev. B; Illumina Inc., USA) with some modifications46 and sequenced using the Illumina Miseq System (Illumina Inc. ...
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bioRxiv - Microbiology 2023Quote: ... The TruSeq Small RNA-seq preparation kit (Illumina) was used for miRNA sequencing according to the manufacturer’s instructions ...
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bioRxiv - Microbiology 2023Quote: ... with some modifications46 and sequenced using the Illumina Miseq System (Illumina Inc., United States).
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bioRxiv - Microbiology 2023Quote: ... The hypervariable V3-V4 region of the 16S rRNA gene was sequenced using the MiSeq sequencing platform (Illumina Inc., USA). A sequencing library for the V3-V4 regions of the 16S rRNA gene was prepared according to a modified version of the instructions provided by the manufacturer (Part # 15044223 Rev ...
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bioRxiv - Microbiology 2023Quote: ... RNAseq was performed on a NextSeq 500 (Illumina, 75-bp PE mid-output run ...
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bioRxiv - Microbiology 2023Quote: ... the following RNA-derived SRA libraries from BioProjects PRJNA730226 and PRJNA730346 (Gao et al., 2021) were used: SRX10900611– SRX10900613 (150-bp Illumina reads from sporozoites), SRX10900614–SRX10900616 (150-bp Illumina reads from unsporulated oocysts) ...
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bioRxiv - Microbiology 2023Quote: ... and SRX9985038–SRX9985040 (150-bp Illumina reads from unsporulated oocysts).
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bioRxiv - Microbiology 2023Quote: ... Sequencing was performed as a Single Read Multiplexed run for 65Lbp sequences on HiSeq 2500 sequencer (Illumina). The multiplexing level was 6 samples per lane ...
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bioRxiv - Microbiology 2023Quote: ... Normalized amplicons were pooled together and submitted for sequencing using Miseq v2.2.0 platform (Illumina Inc, San Diego CA) at Yale Center for Genome Analysis.
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bioRxiv - Microbiology 2023Quote: ... SRX10900614–SRX10900616 (150-bp Illumina reads from unsporulated oocysts), SRX10904653 (PacBio reads from unsporulated oocysts) ...
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bioRxiv - Microbiology 2023Quote: ... and SRX9985037 (150-bp Illumina reads from sporulated oocysts) and SRX9985038–SRX9985040 (150-bp Illumina reads from unsporulated oocysts).
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bioRxiv - Microbiology 2023Quote: ... The library preparations and paired-end sequencing (HiSeq2500, Illumina) were performed as detailed previously (29) ...
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bioRxiv - Microbiology 2023Quote: ... RNA sequencing was performed following ribosomal RNA depletion and cDNA libraries preparation on an NovaSeq platform (Illumina) with paired-end 150bp (Genewiz-Azenta ...
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bioRxiv - Microbiology 2023Quote: ... Next-generation sequencing of amplified regions was performed on Illumina® MiSeq TM (Illumina, San Diego, CA, USA) with 2 x 300 bp paired-end configuration at the Laboratorio Nacional de Genómica para la Biodiversidad (UGA-Langebio ...
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bioRxiv - Microbiology 2023Quote: The prepared libraries were sequenced (2×100 bp paired-end sequencing) on the HiSeq 2500 (Illumina) platform ...
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bioRxiv - Microbiology 2023Quote: ... as determined by Illumina GenomeStudio software ...
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bioRxiv - Microbiology 2023Quote: ... The Infinium MethylationEPIC BeadChip Kit (850K) (Illumina, San Diego, CA, USA) was used for a genome-wide methylation profiling to determine the DNA methylation status of >850,000 CpG sites76 ...
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bioRxiv - Microbiology 2023Quote: ... Directional libraries were prepared using the TruSeq Stranded mRNA Sample preparation kit following the manufacturer’s instructions (Illumina). Libraries were checked for quality on DNA 1000 chips (Bioanalyzer ...
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bioRxiv - Microbiology 2023Quote: ... followed by library generation using the NEBNext Ultra II DNA Library Prep Kit (Illumina), following the manufacturer’s instructions ...
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bioRxiv - Immunology 2023Quote: ... Sequencing libraries were prepared from WTA product using Nextera XT (Illumina). After library construction ...
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bioRxiv - Microbiology 2023Quote: ... amplicon sequence libraries were prepared using the Nextera XT DNA library preparation kit (Illumina, San Diego, CA) according to the manufacturer’s protocol ...
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bioRxiv - Microbiology 2023Quote: ... Sample libraries were sequenced on an Illumina MiSeq platform (Illumina Inc., UK) using the MiSeq Reagent Kit v3 (Illumina ...
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bioRxiv - Microbiology 2023Quote: ... using the MiSeq Reagent Kit v3 (Illumina) and paired-end 300bp chemistry ...
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bioRxiv - Microbiology 2023Quote: ... with an Illumina Stranded Total RNA Prep Ligation with Ribo-Zero Plus Kit (Illumina). Sample quality was ensured using an Agilent Bioanalyzer 2100 or Advanced Analytical Fragment Analyzer ...
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bioRxiv - Microbiology 2023Quote: ... Library preparation was performed according to the library preparation protocol (TruSeq® Stranded total RNA Reference Guide, Illumina (1000000040498)) with an Illumina Stranded Total RNA Prep Ligation with Ribo-Zero Plus Kit (Illumina) ...
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bioRxiv - Immunology 2023Quote: ... RNA-seq libraries were generated from 5 ng of RNA with the SMART-Seq v4 Ultra Low Input RNA Kit from Takara Bio (#634889) and the DNA Prep Kit from Illumina (#20060060) and were clustered and sequenced using an Illumina NovaSeq 6000 instrument ...
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bioRxiv - Neuroscience 2023Quote: ... Libraries were constructed using NEB polyA RNA ultra II and subsequently subjected to 150 cycles of sequencing on NovaSeq-6000 (Illumina). Adapters were trimmed using Cutadapt (v2.3) ...
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bioRxiv - Microbiology 2023Quote: ... 43 genomes were sequenced using a 150-bp paired-end run from Illumina NovaSeq 6000 platform ...
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bioRxiv - Neuroscience 2023Quote: ... The amplified cDNA was used to construct an Illumina sequencing library and sequenced on a single lane of a NovaSeq 6000 (Illumina). For FASTQ generation and alignments ...
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bioRxiv - Neuroscience 2023Quote: ... The libraries were sequenced on NovaSeq6000 (Illumina) in paired-end following the manufacturer’s protocol for dual indexing ...
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bioRxiv - Neuroscience 2023Quote: ... cDNA library preparation with oligo-dT primers following the Illumina TruSeq stranded mRNA sample preparation guide (Illumina, San Diego, CA), and sequencing procedure with Illumina HiSeq 3000 platform with 30-50x106 bp reading depth were previously described in detail 19 ...
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bioRxiv - Neuroscience 2023Quote: ... RNA libraries for RNA-seq were prepared using a Nextera XT DNA Library Prep Kit (Illumina, San Diego, CA) following the manufacturer’s protocols ...
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bioRxiv - Microbiology 2023Quote: ... Genome sequencing of bacteriophages and bacterial isolates was carried out using a paired end approach (2 × 150 bp) on iSeq100 and Miseq platform (Illumina) respectively ...
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bioRxiv - Microbiology 2023Quote: ... The RNA-seq transcriptome libraries were constructed using the TruSeqTM RNA sample preparation kit (Illumina, San Diego, CA, USA) with a total of 2 µg RNA ...
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bioRxiv - Genomics 2023Quote: Further validation of the mitogenome sequence was performed by Illumina reference short reads ...
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bioRxiv - Genomics 2023Quote: ... lapponica using a Nextera DNA Flex kit with Nextera DNA CD indexes (Illumina). Each library was constructed with 500ng of starting material ...
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bioRxiv - Genomics 2023Quote: Quality-based read trimming was performed to remove poor-quality reads and contaminating adapter sequences using trimmomatic v.0.39 (Bolger et al., 2014) (parameters: ILLUMINACLIP:Illumina-adapters.fa:2:30:10 SLIDINGWINDOW:10:20 MINLEN:50) ...
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bioRxiv - Genomics 2023Quote: ... Following sequencing to at least 20 million reads on a NovaSeq platform (Illumina), reads were processed following the ENCODE pipeline (https://github.com/ENCODE-DCC/rna-seq-pipeline) ...
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bioRxiv - Genomics 2023Quote: ... and used for standard poly(A)+ selection and library preparation with the TruSeq kit (Illumina). Following sequencing to at least 20 million reads on a NovaSeq platform (Illumina) ...
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bioRxiv - Genomics 2023Quote: ... a pilot sequencing was done on Illumina MiSeq Nano platform (Illumina, San Diego, CA, USA). The libraries were sequenced on an Illumina NovaSeq 6000 platform (S Prime flow cell ...
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bioRxiv - Genomics 2023Quote: ... as per manufacturer’s instructions and the resulting libraries were paired-end sequenced on a NextSeq500 platform (Illumina) to obtain at least 107 reads ...
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bioRxiv - Genomics 2023Quote: ... Following sequencing on a NovaSeq platform (Illumina), Hi-C reads were aligned to the reference genome GRCh38 using bwa mem (v0.7.17 ...
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bioRxiv - Genomics 2023Quote: ... FASTQ files were created and demultiplexed using bcl2fastq v2.17.1.14 Conversion Software (Illumina). Deep sequencing was performed by the Roy J ...