Labshake search
Citations for Illumina :
7151 - 7200 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Developmental Biology 2023Quote: ... and strand-specific polyA-selected libraries were generated with TruSeq RNA Library Preparation Kit (Illumina). The obtained libraries were combined in an equimolar amount and loaded on Illumina flow cell lanes ...
-
bioRxiv - Developmental Biology 2023Quote: ... Libraries were prepared using TruSeq RNA kit (Illumina) following manufacturer instructions ...
-
bioRxiv - Developmental Biology 2023Quote: ... cDNA libraries were prepared using the 10X Genomics 3’mRNA-seq workflow (10X Genomics) and sequenced using a NovaSeq instrument (Illumina). Data was processed using CellRanger (10X Genomics ...
-
bioRxiv - Developmental Biology 2023Quote: ... RNA sequencing was conducted by Illumina NextSeq 2000 machine using NextSeq 2000 P2 ...
-
bioRxiv - Developmental Biology 2023Quote: ... 100 cycles kit (Illumina, USA). The output was ∼ 25 million single end- 120 bp reads per sample.
-
bioRxiv - Developmental Biology 2023Quote: ... CUT&RUN libraries were sequenced on a NovaSeq 6000 (Illumina) from Biocampus ...
-
bioRxiv - Developmental Biology 2023Quote: ... RNA samples were converted to sequencing libraries using the TruSeq Stranded mRNA kit (Illumina Cat. #20020595). Resulting libraries were assessed for quality via analysis on a 2100 Bioanalyzer (Agilent Technologies ...
-
bioRxiv - Developmental Biology 2023Quote: ... prior to sequencing on an Illumina NextSeq 500 using the 75-cycle High Output v2 kit (Illumina). In total ...
-
bioRxiv - Developmental Biology 2023Quote: ... Paired-end 75bp sequencing was carried out by clustering 1.5pM of the library pool on a NextSeq 500 sequencer (Illumina).
-
bioRxiv - Developmental Biology 2023Quote: Library preparation was performed according to manufacturer’s instructions (NEBNext® Ultra™ II DNA Library Prep Kit for Illumina) using the following modified library amplification program ...
-
bioRxiv - Developmental Biology 2023Quote: ... according to the manufacturer’s protocol (Illumina). Sequencing to produce single-end 50-bp reads was then performed on an Illumina HiSeq 4000 instrument (Supplementary Table 1).
-
bioRxiv - Cancer Biology 2023Quote: Total RNA isolated from murine mammary adipose tissue contralateral to the tumor was used to prepare sequencing libraries with Illumina TruSeq Stranded Total RNA Sample Preparation kit and sequenced using an Illumina HiSeq 2000 instrument (Illumina).
-
bioRxiv - Cancer Biology 2023Quote: ... PCR amplicons were then sequenced using an Illumina MiSeq platform (Illumina, San Diego, CA) (UNC High- Throughput Sequencing Facility) ...
-
bioRxiv - Cancer Biology 2023Quote: Sequencing was performed with NovaSeq 6000 (Illumina) at a depth of 18-50 million paired reads per sample ...
-
bioRxiv - Cancer Biology 2023Quote: ... Sequencing was performed with NovaSeq 6000 or HiSeq1500 (Illumina) at a depth of 20 to 56 million single-end reads.
-
bioRxiv - Cancer Biology 2023Quote: ... Libraries were sequenced on a NextSeq kit (Illumina) with 75bp single-end read chemistry and 9 bp index read ...
-
bioRxiv - Cancer Biology 2023Quote: ... and sequenced on a NovaSeq 6000 (Illumina) using NovaSeq SP Reagent Kits (100 cycles).
-
bioRxiv - Cancer Biology 2023Quote: Analysis: Reads were demultiplexed with Bcl2fastq v2.20.0.422 (Illumina) and quality-checked with FastQC115 ...
-
bioRxiv - Cancer Biology 2023Quote: Data analysis: Binary base call (BCL) files were demultiplexed using Bcl2fastq v2.20.0.422 (Illumina) and pre-processed using Space Ranger (v1.1.0 or v1.2.0 ...
-
bioRxiv - Cancer Biology 2023Quote: ... adding 10% PhiX spike-in (Illumina).
-
bioRxiv - Cancer Biology 2023Quote: Analysis: FASTQ files were demultiplexed with Bcl2fastq v2.20.0.422 (Illumina) and adaptors were trimmed with cutadapt91 with following parameters (-g CACCG and -a GTTTT) ...
-
bioRxiv - Cancer Biology 2023Quote: ... NEBNext Low Input RNA libraries were prepared manually following the manufacturer’s protocol (NEBNext® Single Cell/Low Input RNA Library Prep Kit for Illumina® Instruction Manual Version 5.0_5/20 ...
-
bioRxiv - Cancer Biology 2023Quote: ... plus 10µl of a unique index (NEBNext Multiplex Oligos for Illumina [NEB #E6609]). Libraries were amplified by 8 PCR cycles ...
-
bioRxiv - Cancer Biology 2023Quote: ... Samples were additionally quantified by RiboGreen and assessed for quality control using an Agilent BioAnalyzer in the Integrated Genomics Core at MSKCC and 513 ng to 1.0 µg of total RNA with an RNA integrity number ranging 1.3–8.3 underwent ribosomal depletion and library preparation using the TruSeq Stranded Total RNA LT kit (Illumina, RS-122-1202) according to instructions provided by the manufacturer with eight cycles of PCR ...
-
bioRxiv - Cancer Biology 2023Quote: ... data is demultiplexed into single cells (BCL Convert, Illumina Basespace dashboard), matched against a list of known barcodes and mapped (Salmon alevin v1.4.0 ...
-
bioRxiv - Cancer Biology 2023Quote: ... RIN>6.8) was used for ribonucleotide-depleted long-noncoding RNA sequencing on a NovaSeq 6000 (Illumina, San Diego, CA, USA). Fastq reads were aligned to the human reference genome GRCh38 using STAR (version 2.6.0c ...
-
bioRxiv - Cancer Biology 2023Quote: ... a custom second-strand synthesis buffer (Illumina) was added with dNTPs ...
-
bioRxiv - Cancer Biology 2023Quote: ... BCL raw data were converted to FASTQ data and demultiplexed by bcl2fastq Conversion Software (Illumina). Fastq files were mapped against the humen genome (build GRCh38.p13 ...
-
bioRxiv - Cancer Biology 2023Quote: ... using the HiSeq 3000/4000 SBS kit (Illumina). On average ...
-
bioRxiv - Cancer Biology 2023Quote: ... Run parameters and quality control metrics recommended by Illumina and 10x Genomics were all met or exceeded ...
-
bioRxiv - Cancer Biology 2023Quote: ... Single-end sequencing was performed using the library prep kit TruSeq and the sequencing kit NovaSeq6000 SP Flowcell 100 cycles (Illumina, Inc.) for Mus musculus (Ensembl.GRCm38.82) ...
-
bioRxiv - Cancer Biology 2023Quote: ... Recommended protocol for Infinium MethylationEPIC Kit was used (Infinium HD Methylation Assay Reference Guide, Illumina). Laboratory procedures were performed by Eurofins Genomics service.
-
bioRxiv - Cancer Biology 2023Quote: ... 82 Samples were sequenced on a HiSeq2000 or NextSeq (Illumina). For analysis ...
-
bioRxiv - Cancer Biology 2023Quote: ... and used for genome-wide DNA methylation profiling with Methylation EPIC (Illumina) BeadChip microarrays ...
-
bioRxiv - Cancer Biology 2023Quote: ... DNA was sequenced on a NovaSeq (Illumina, San Diego, CA) at the Genomics Platform at the Broad Institute.
-
bioRxiv - Cancer Biology 2023Quote: ... Libraries were sequenced on a NovaSeq 6000 platform (Illumina), paired-end mode ...
-
bioRxiv - Cancer Biology 2023Quote: ... cDNA libraries were generated using the TruSeq Sample Preparation v2 guide (Illumina) and paired-end sequencing on a NovaSeq 6000 (Illumina) ...
-
bioRxiv - Cancer Biology 2023Quote: ... and paired-end sequencing on a NovaSeq 6000 (Illumina). Adaptor sequences and polyT tails were trimmed from unprocessed reads using fqtrim version 0.9.7 ...
-
bioRxiv - Cancer Biology 2023Quote: ... 150pg of cDNA was used to generate Illumina compatible sequencing libraries with the NexteraXT library preparation kit (Illumina, San Diego, CA) per manufacturer’s protocols ...
-
bioRxiv - Cancer Biology 2023Quote: ... and sequenced at paired-end 50 bps on NextSeq 2000 sequencer (Illumina). The raw sequencing reads in BCL format were processed through bcl2fastq 2.20 (Illumina ...
-
bioRxiv - Cancer Biology 2023Quote: ... The amplified libraries were hybridized to the Illumina flow cell using the cBot (Illumina, San Diego, CA) and sequenced with single-end reads of 100 nt on the Illumina HiSeq2500.
-
bioRxiv - Cancer Biology 2023Quote: ... The resulting cDNA libraries were sequenced on a NovaSeq 6000 system (Illumina).
-
bioRxiv - Cancer Biology 2023Quote: ... paired-end on Nextseq500 (Illumina).
-
bioRxiv - Cancer Biology 2023Quote: ... Sequencing was performed with the NextSeq 500/550 High Output v2 kit for 150 cycles (Illumina) paired-end on Nextseq500 (Illumina).
-
bioRxiv - Cancer Biology 2023Quote: ... Sequencing was performed with the NextSeq 500/550 High Output v2 kit for 75 cycles (Illumina), single-end Nextseq500 (Illumina).
-
bioRxiv - Cancer Biology 2023Quote: ... The pooled sequencing library was then quality controlled and sequenced on a NovaSeq 6000 instrument (Illumina). Paired-end and dual-indexed reads were generated in the format of 2 x 28bp with an additional 2 x 8bp for index sequences.
-
bioRxiv - Cancer Biology 2023Quote: ... Gene expression was determined with the Illumina HT12v4 array (Illumina, Inc., San Diego, CA, US). As published by de Lange et al 201539.
-
bioRxiv - Cancer Biology 2023Quote: ... PCR amplicons surrounding Usp18 sgRNA cut sites were sequenced (MiSeq, Illumina) and frame-shift mutation frequency for triploid CT26 cells was estimated to be ∼65% by the following equation ...
-
bioRxiv - Cancer Biology 2023Quote: ... Libraries were prepared with a TruSeq Stranded mRNA Library Prep kit (Illumina). Libraries were multiplexed at an equimolar ratio ...
-
bioRxiv - Cancer Biology 2023Quote: ... and 1.3 pM of the multiplexed pool was sequenced on a NextSeq 500 instrument with a NextSeq 500/550 Mid/High Output v2.5 kit (Illumina) to obtain 75-bp paired-end reads ...