Labshake search
Citations for Illumina :
6401 - 6450 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Genomics 2023Quote: ... and used in qPCR or sequencing on a HiSeq4000 platform (Illumina). Where ChIP-seq was performed ...
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bioRxiv - Genomics 2023Quote: ... Sequencing was run on the NovaSeq 6000 platform (Illumina, San Diego, CA, USA) to obtain at least 50,000 reads per cell.
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bioRxiv - Genomics 2023Quote: Sequencing libraries were prepared using the NextEra XT library prep kit and then run on NextSeq-500 sequencer (Illumina, CA, USA): a 150-bp paired-end sequencing run was performed using a Mid output Kit v2 ...
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bioRxiv - Genomics 2023Quote: ... All the multiplexed libraries generated were sequenced using NextSeq2000 (Illumina), a high-throughput flow cell and adopting a P2 200 cycle (100 Pair End ...
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bioRxiv - Genomics 2023Quote: ... The library was sequenced on an Illumina HiSeqX platform (Illumina, San Diego, California, USA) to produce ∼30X sequence coverage ...
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bioRxiv - Genomics 2023Quote: ... Libraries were pooled and sequenced using the NextSeq 2000 platform (Illumina). To assess whether 16S cDNA was removed ...
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bioRxiv - Microbiology 2023Quote: ... Using the TruSeq Stranded RNA kit (Illumina, Inc., Carlsbad, CA), the ribo-depleted RNA was fragmented using divalent cations under elevated temperature ...
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bioRxiv - Cell Biology 2023Quote: ... Pooled next generation sequencing of edited loci was performed by GEML (FGCZ of Uni Zürich and ETH) on a MiSeq sequencer (Illumina) with 150 bp paired-end reads ...
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bioRxiv - Genomics 2023Quote: ... rRNA was depleted from total RNA using the Ribo-Zero rRNA Removal Kit (Human/Mouse/Rat) (Illumina, San Diego, CA) to enrich for coding RNA and long non-coding RNA ...
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bioRxiv - Genomics 2023Quote: ... according to the standard manufacturer’s protocol (Illumina, San Diego, CA). The raw sequence reads were aligned to human genome hg38 (ensembl_GRCh38 ...
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bioRxiv - Genomics 2023Quote: ... Preparation of samples for RNA-Seq analysis was performed using the TruSeq RNA Sample Preparation Kit (Illumina, San Diego, CA). Briefly ...
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bioRxiv - Genomics 2023Quote: ... 6.3 Gbp of data in 41.8 million reads (2 × 150 cycles) were produced using the MiniSeq System (Illumina, San Diego, Ca, USA). Illumina short reads were quality checked using FastQC v0.11 (http://www.bioinformatics.babraham.ac.uk/projects/fastqc) ...
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bioRxiv - Genomics 2023Quote: DNA was processed using the Nextera XT v3 Library Preparation Kit (Illumina, San Diego, Ca, USA) to construct two libraries for short-read sequencing ...
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bioRxiv - Genomics 2023Quote: ... Raw sequence data (.bcl files) generated from Illumina NovaSeq was converted into fastq files and de-multiplexed using Illumina bcl2fastq 2.20 software ...
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bioRxiv - Genomics 2023Quote: ... Clustering and sequencing were performed on a NovaSeq 6000 (Illumina, San Diego, CA, USA) using the single read 100 nt protocol on 1 lane of a flow cell SP.Image analyses and base calling were performed using the Miniseq Control Software and the Real-Time Analysis component (Illumina) ...
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bioRxiv - Genomics 2023Quote: ... The libraries were sequenced at an Illumina NovaSeq platform (Illumina, CA) targeting approximately 20 million 150 bp paired end reads.
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bioRxiv - Genomics 2023Quote: ... followed by adding 60 μl NPM (Illumina, FC-131-1096), 12 μl 10 μM Indexed Nextera P5 primer ...
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bioRxiv - Genomics 2023Quote: ... followed by adding 15 μl NPM (Illumina, FC-131-1096), 3 μl 10 μM Indexed Nextera P7 primer ...
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bioRxiv - Genomics 2023Quote: ... or NovaSeq platform (Illumina).
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bioRxiv - Genomics 2023Quote: ... about 40 ng purified pre-amplified Hi-C sample was fragmented in two 50 μl tagmentation mix (1x TD buffer and 0.5 μl TDE1 (Illumina Tagment DNA TDE1 Enzyme and Buffer Kit ...
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bioRxiv - Genomics 2023Quote: ... about 1.5 ng purified pre-amplified cDNA sample was fragmented in four 20 μl tagmentation mix (10 μl 2x TD buffer, 5 μl Nextera XT (Illumina, FC-131-1096), and 5 μl cDNA sample ...
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bioRxiv - Cell Biology 2023Quote: Protospacers were quantified by deep sequencing using 21 initial dark cycles on a NextSeq 2000 device (Illumina) by the Genome Engineering and Measurement Lab of the Functional Genomics Center Zürich (GEML ...
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bioRxiv - Genomics 2023Quote: ... The sequencing library was then sequenced using a 75 bp single-read NextSeq High Output kit (Illumina).
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bioRxiv - Genomics 2023Quote: ... Samples were sequenced using a NovaSeq SP kit (Illumina) 50 bp paired-end reads at a sequencing depth of approximately 30 million reads per sample ...
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bioRxiv - Genomics 2023Quote: ... Samples were sequenced using a NovaSeq SP kit (Illumina) with 100bp or 50 bp paired-end reads at a sequencing depth of approximately 100 million reads per sample.
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bioRxiv - Genomics 2023Quote: ... Beads were resuspended in TD buffer and Tn5 (Illumina, 20034198) was added at the suggested dilutions and tagmentation was allowed to occur at 55 °C for 10 minutes with 900 rpm shaking ...
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bioRxiv - Genomics 2023Quote: ... Next-generation sequencing was conducted with the NovaSeq 6000 platform (Illumina).
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bioRxiv - Genomics 2023Quote: ... Libraries were sequenced on a NovaSeq 6000 (Illumina, San Diego, California) in the Michigan State University Research Technology Support Facility (MSU RTSF ...
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bioRxiv - Genomics 2023Quote: RNA was submitted for library preparation using TruSeq (Illumina, San Diego, CA, USA) and sequenced using Illumina HiSeq 2500 by paired-end sequencing at the Yale Center for Genome Analysis (YCGA).
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bioRxiv - Microbiology 2023Quote: ... using the TruSeq Stranded Total RNA Library Prep Gold Kit (Illumina, San Diego, CA, USA), and for sequencing on the HiSeq4000 platform (Illumina) ...
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bioRxiv - Genomics 2023Quote: ... at the United States Department of Agriculture (USDA, Ames, IA, USA) with Nextera XT DNA Library Prep Kit from Illumina. WGS of the samples in Batch 2 was commercially conducted by STABVida (Portugal ...
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bioRxiv - Genomics 2023Quote: ... WGS of the samples of Batch 3 was commercially performed by Eurofins (Germany) using Genome Sequencer Illumina NovaSeq platform (Illumina, California, USA) (paired-end 150 bp reads).
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bioRxiv - Genomics 2023Quote: ... Reconstruction of plasmids from Illumina reads was performed using PLACNETw(51).
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bioRxiv - Immunology 2023Quote: ... was performed at 19-36 million reads/sample in single-end mode with 75 nt read length on the NextSeq 500 platform (Illumina) with 1 High Output Kit v2.5 ...
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bioRxiv - Immunology 2023Quote: ... Demultiplexed FASTQ files were generated with bcl2fastq2 v2.20.0.422 (Illumina). To assure high sequence quality ...
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bioRxiv - Immunology 2023Quote: ... cDNA libraries suitable for sequencing were prepared from 500 ng of total RNA with TruSeq mRNA Stranded Library Prep Kit from Illumina according to manufacturer’s instructions (1/2 volume) ...
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bioRxiv - Immunology 2023Quote: ... 0.5 ng of each library was subjected to a tagmentation-based protocol (Nextera XT, Illumina) using a quarter of the recommended reagent volumes ...
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bioRxiv - Immunology 2023Quote: ... provided by Illumina. Additional statistics on sequencing quality were compiled with an in-house script from the FASTQ-files ...
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bioRxiv - Genomics 2023Quote: Sequencing libraries were generated using the TruSeq ChIP Library Preparation Kit - Set A (Illumina, IP-202-1012) according to the manufacturer’s instructions ...
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bioRxiv - Genomics 2023Quote: ... The resulting libraries were paired-end sequenced to >50 million read pairs on a HiSeq4000 platform (Illumina). Reads were trimmed and mapped to human genome hg19 using STAR ...
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bioRxiv - Microbiology 2023Quote: ... Libraries were generated using the TruSeq DNA PCR-Free Prep Kit (Illumina) and quality was assessed using Qubit 2.0 on a Thermo Scientific Fluorometer and Agilent Bioanalyzer 2100 system ...
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bioRxiv - Microbiology 2023Quote: ... 7pM of the pooled library with 30% PhiX phage as a control was sequenced using a 300-cycle Illumina MiSeq Kit (Illumina, Inc., San Diego, CA), generating 150bp paired-end reads ...
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bioRxiv - Microbiology 2023Quote: ... The fragmented and rRNA-depleted RNA was reverse transcribed to create first strand cDNA using Illumina TruSeq Stranded mRNA Library prep kit (Illumina) followed by second strand cDNA synthesis which incorporates dUTP to quench the second strand during amplification ...
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bioRxiv - Microbiology 2023Quote: ... directional libraries were prepared using the TruSeq Stranded mRNA Sample preparation kit following the manufacturer’s instructions (Illumina). Libraries were checked for quality on Bioanalyzer DNA 1000 chips (Agilent) ...
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bioRxiv - Microbiology 2023Quote: ... Ribosomal RNA depletion was performed using the Bacteria RiboZero kit (Illumina). From rRNA-depleted RNA ...
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bioRxiv - Microbiology 2023Quote: ... using the True-Seq Stranded Total RNA Library Kit (Illumina Inc., USA).
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bioRxiv - Microbiology 2023Quote: ... Total RNA (500 ng) was used to prepare libraries for sequencing using the Illumina TruSeq Stranded mRNA Library Prep kit (Illumina; 20020594) and SuperScript II Reverse Transcriptase (Invitrogen ...
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bioRxiv - Cell Biology 2023Quote: ... Sequencing libraries were prepared using the TruSeq Stranded mRNA sample preparation kit (Illumina) following the manufacturer’s protocol and sequenced with an Illumina NextSeq 500 or NovaSeq ...
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bioRxiv - Cell Biology 2023Quote: ... Libraries were pooled and sequenced (single-end, 100bp) on a NextSeq2000 according to the manufacturer’s instructions (Illumina Inc., San Diego, CA, USA). For each sample ...
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bioRxiv - Genomics 2023Quote: ... Ampure-bead purification and were normalized using an Illumina Nextera XT DNA sample preparation kit (Illumina, CA, USA). Multiplex pools were sequenced using MiSeq Reagent Kit v3.0 (Illumina ...