Labshake search
Citations for Illumina :
3601 - 3650 of 4662 citations for Genz 644282 CAS 529488 28 6 99% since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Immunology 2021Quote: Total RNA was extracted from experimental tissue samples and sequencing libraries were prepared by the Illumina Nextera XT method following manufacturer’s recommendations (Illumina, San Diego, CA). The multiplexed libraries were sequenced in a NextSeq500 instrument in 150 bp paired end mode ...
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bioRxiv - Immunology 2020Quote: ... The Illumina RNA-seq cDNA library was prepared using 1 μg of RNA from each sample and TruSeq V2 kits (Illumina, CA, USA), with reduced RNA fragmentation time (3 minutes ...
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bioRxiv - Immunology 2020Quote: ... One microgram of high quality RNA (RIN>8) was used as a template for library generation using the Illumina TruSeq RNA Sample Prep Kit v2 (Illumina; CA, USA) according to the manufacturer’s protocol ...
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bioRxiv - Plant Biology 2021Quote: ... Libraries for RNA-Seq were prepared from 1 µg of total RNAs with the TruSeq Stranded mRNA Library Prep Kit (Illumina, CA, USA), multiplexed and sequenced in two runs with an Illumina NextSeq500 device (high throughput mode ...
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bioRxiv - Genomics 2021Quote: ... Libraries with 250-350 bp insert sizes were prepared using the TruSeq RNA Sample Prep Kit v2 (Illumina, San Diego, CA, USA). To obtain transcriptome profiles ...
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bioRxiv - Genomics 2021Quote: ... ~800 ng of total RNA was depleted of rRNA using the Ribo-Zero rRNA Removal Kit (Illumina, Inc., San Diego, CA, USA), sheared ...
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bioRxiv - Cancer Biology 2021Quote: ... RNA-seq libraries were prepared using the TruSeq Stranded Total RNA prep kit with Ribo-Zero Gold to remove cytoplasmic and mitochondrial rRNA according to the manufacturer’s recommendation (Illumina, San Diego, CA). Total RNA-seq libraries were run on an Illumina NextSeq 500 sequencing instrument according to the manufacturer’s protocol ...
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bioRxiv - Genomics 2020Quote: ... we ran the library on a 2×100 cycle sequencing run on an Illumina MiSeq v2 (Illumina, Inc., San Diego, CA, USA). The qualified library was sequenced using the Illumina NovaSeq6000 (Illumina ...
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bioRxiv - Microbiology 2021Quote: ... followed by sequencing with a Novaseq 6000 sequencer using 150 base read lengths in paired-end mode (Illumina, San Diego, CA, USA) according to manufacturer’s protocol in the facilities of ADM LifeSequencing (Paterna ...
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bioRxiv - Microbiology 2023Quote: ... Genomic DNA of samples 161-U7 and 161-I0 were sequenced at Macrogen on a Novaseq 6000 sequencer (Illumina, San Diego, CA) to obtain 151 cycle paired-end libraries with an insert-size of 550 bp using TruSeq Nano DNA library preparation ...
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bioRxiv - Molecular Biology 2023Quote: ... mRNA and sRNA libraries were constructed by Illumina trueseq stranded mRNA library preparation kit (Cat. No. 20020594) and TruSeq small RNA sample preparation guide (Illumina, San Diego, CA, United States) as per the manufacturer’s protocol ...
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bioRxiv - Microbiology 2022Quote: ... Each sample’s total DNA was fragmented and tagged with sequencing adapters using Nextera XT DNA Library Preparation Kit (Illumina, San Diego, CA). As previously described ...
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bioRxiv - Microbiology 2023Quote: ... 200 ng of genomic DNA was used as input in the Illumina DNA Prep Kit following the manufacturer’s instructions (Illumina, San Diego, CA). For the in vitro and in vivo experiments (Fig ...
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bioRxiv - Genomics 2023Quote: Whole genome DNA library preparation was performed using 100 ng DNA as input according to the standard protocol for Nextera DNA Flex Library Prep (Illumina, CA, USA) using Nextera DNA CD Indexes (Reference Guide 1000000025416.v07 ...
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bioRxiv - Genomics 2023Quote: ... and sequenced with a MiSeq system and v3 chemistry (600 cycles) following the instructions of the manufacturer (Illumina, San Diego, CA, USA). Sequencing kits and program versions for Nanopore sequencing are shown in the Supplementary Table S1 ...
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bioRxiv - Genomics 2023Quote: ... DNA libraries were synthesised from 3.9 μg of gDNA using the Illumina TruSeq DNA PCR-Free kit (Illumina, San Diego, CA, USA) and sequenced on Illumina NovaSeq 6000 platform (Illumina ...
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bioRxiv - Genetics 2023Quote: ... additional OGM findings were confirmed with the SOC methods karyotyping and the Infinium Global Screening Array-24 v3.0-EA-MD (SNP-Array) (Illumina, San Diego, CA), according to standard protocols ...
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bioRxiv - Developmental Biology 2023Quote: ... Approximately 35 million pair-end sequences of 100 nucleotides long were produced per sample in a NovaSeq6000 instrument (Illumina, San Diego, CA) at the Genomics Technology Core at the University of Missouri.
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bioRxiv - Microbiology 2023Quote: ... Sequencing was conducted on an Illumina MiSeq using a paired-end 2 x 300 base-pair method (Illumina, San Diego, CA, USA).
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bioRxiv - Plant Biology 2023Quote: ... and 470 bp and 800 bp for PI 537277 were prepared using the Genomic DNA Sample Prep kit (Illumina, San Diego, CA). Four mate-pair libraries with insert sizes of 5 ...
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bioRxiv - Zoology 2023Quote: ... Library construction for transcriptome sequencing was carried out using the TruSeq Stranded mRNA LT Sample Prep Kit from Illumina (San Diego, CA), following the manufacturer’s protocol ...
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bioRxiv - Cancer Biology 2023Quote: ... The RNA-Seq libraries were sequenced on NextSeq 500 using the NextSeq 500/550 High Output Kit v2.5 (75 cycles) (Illumina, San Diego, CA).
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bioRxiv - Genomics 2023Quote: ... 6.3 Gbp of data in 41.8 million reads (2 × 150 cycles) were produced using the MiniSeq System (Illumina, San Diego, Ca, USA). Illumina short reads were quality checked using FastQC v0.11 (http://www.bioinformatics.babraham.ac.uk/projects/fastqc) ...
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bioRxiv - Plant Biology 2023Quote: ... Sequencing of libraries were conducted at Cornell University Institute of Biotechnology (Ithaca, NY, USA) using NextSeq500 (Illumina, Inc., San Diego, CA, USA) with 95 samples per lane ...
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bioRxiv - Molecular Biology 2022Quote: ... 1 µg of total RNA was used as input for the TruSeq RNA Library Prep Kit v2 (Illumina, Inc., San Diego, CA) and the manufacturer’s protocol was followed ...
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bioRxiv - Microbiology 2022Quote: ... Amplified cDNA was fragmented and appended with dual-indexed barcodes using Illumina Nextera XT DNA Library Prep kits (Illumina, San Diego, CA). Libraries were validated on an Agilent 4200 TapeStation (Agilent Technologies ...
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bioRxiv - Molecular Biology 2022Quote: ... Single-read sequencing was performed on a NovaSeq 6000 device using an S2 Reagent kit (100 cycles) according to the manufacturer’s instructions (Illumina Inc., CA, USA).
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bioRxiv - Developmental Biology 2022Quote: ... Complementary DNA libraries from total RNA samples were prepared with Illumina TruSeq RNA preparation kits according to the manufacturer’s instructions (Illumina, San Diego, CA). RNA integrity was assessed using an Agilent 2100 Bioanalyzer (Santa Clara ...
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bioRxiv - Molecular Biology 2022Quote: ... RNA-sequencing libraries were prepared using TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat (RS-122-2201; Illumina, CA, USA) according to manufacturers’ protocol ...
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bioRxiv - Physiology 2022Quote: ... Quantified libraries were pooled and sequenced on an Illumina NextSeq using a high capacity 75 read flow cell (Illumina, San Diego, CA) following the manufacturer’s instructions ...
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bioRxiv - Neuroscience 2022Quote: ... Libraries for RNA-seq were prepared using the paired-end TruSeq® Stranded mRNA Sample Preparation kit (Illumina, San Diego, Ca, USA) according to manufacturer’s instructions ...
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bioRxiv - Microbiology 2022Quote: ... 150 pg of cDNA was used to generate Illumina compatible sequencing libraries with the NexteraXT library preparation kit (Illumina, San Diego, CA) per manufacturer’s protocols ...
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bioRxiv - Microbiology 2022Quote: ... following the manufacturer’s instructions and libraries for shotgun metagenomic sequencing were prepared using Illumina DNA Prep kits (Illumina, San Diego, CA, USA). Briefly ...
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bioRxiv - Evolutionary Biology 2022Quote: ... We sent 100 ng to Genome Quebec for paired-end 150bp sequencing on the Illumina HiSeq4000 or the NovaSeqSP 6000 (one library each) following Genome Quebec’s discontinuation of the HiSeq4000 platform (Illumina, San Diego, CA). The NovaSeq sequences the same reads as the HiSeq but at greater read depths ...
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bioRxiv - Neuroscience 2024Quote: The Total RNA Library was prepared using the Illumina NovaSeq (S4) 300 cycle flow cell and reagent kit (Illumina, San Diego, CA). The high-throughput sequencing strategy included 300 cycles and a read length of paired-end 150 base pairs ...
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bioRxiv - Cancer Biology 2024Quote: ... Prepared libraries were subjected to high throughput sequencing using Illumina NovaSeq 6000 system using S4 flow cell (Illumina, San Diego, CA, USA) and v1.5 chemistry ...
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bioRxiv - Microbiology 2024Quote: ... The RNA was treated with the QIAseq FastSelect 5S/16S/23S rRNA removal kit prior to library prep with the TruSeq Stranded Total RNA Library Prep Kit (Illumina, CA, USA). The Illumina HISeq 4000 was used for sequencing at 50bp single-end reads.
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bioRxiv - Microbiology 2024Quote: ... The 16S rRNA amplicons and ITS amplicons were pooled separately and sequenced using the Illumina MiSeq instrument (Illumina, San Diego, CA, USA). The raw sequences were quality filtered using the Quantitative Insights into Microbial Ecology pipeline (QIIME v1.9) ...
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bioRxiv - Evolutionary Biology 2023Quote: ... insert size 550 nt) were constructed from 1.8-2 µg gDNA with the TruSeq DNA PCR-Free kit (Illumina, San Diego, CA) and sequenced on the Illumina HiSeq 2500 by the Genomics Core Facility at Pennsylvania State University ...
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bioRxiv - Pharmacology and Toxicology 2024Quote: ... cDNA libraries were singe-end sequenced in 76 cycles using a NSQ 500/550 Hi Output KT v2.5 (Cat #20024906 Illumina, San-Diego, CA) in one multiplex run (N=3/exposure group) ...
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bioRxiv - Microbiology 2024Quote: ... An equal amount of DNA from each library was pooled and sequenced using 150 bp paired-end settings on an NextSeq550 platform (Illumina, CA, USA).
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bioRxiv - Pharmacology and Toxicology 2024Quote: ... The FASTQ read files were generated and demultiplexed and adapters were trimmed with the bcl2fastq v2.20 Conversion Software (Illumina, San Diego, CA).
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bioRxiv - Neuroscience 2024Quote: ... Illumina Sequencing libraries were prepared using the TruSeq low sample protocol from 1 µg of total RNA (Illumina, San Diego, CA, USA). The resulting libraries were sequenced in paired-end mode ...
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bioRxiv - Neuroscience 2024Quote: ... cDNA libraries were prepared using 200 ng of total RNA according to the manufacturer’s instructions for the TruSeq Stranded mRNA Sample Prep Kit (Illumina, San Diego, CA). The concentration and size distribution of the completed libraries were determined using Qubit fluorometry and an Agilent BioAnalyzer DNA 1000 chip (Santa Clara ...
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bioRxiv - Neuroscience 2024Quote: ... RNAseq libraries were prepared from 2500 ng total RNA using the TruSeq RNA Library Preparation Kit v2 (Illumina, San Diego, CA, USA) after poly(A ...
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bioRxiv - Developmental Biology 2023Quote: ... The resulting libraries were sequenced using HiSeq 2500 or NovaSeq 6000 platforms in a single-end mode (Illumina, San Diego, CA, USA). Sequenced reads (approximately 10 million reads ...
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bioRxiv - Microbiology 2024Quote: ... the library preparations with SSLR were performed according to the above-mentioned steps and sequenced on a NovaSeq6000 platform (Illumina, CA, USA).
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The transcriptomic landscape of monosomy X (45,X) during early human fetal and placental developmentbioRxiv - Genetics 2024Quote: ... The Illumina Global Screening Array platform was used (v3.0) (Infinium HTS Assay Reference Guide (# 15045738 v04) (Illumina, Inc. San Diego, CA, USA). Output data were analyzed in Illumina Genome Studio version 2.0 ...
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bioRxiv - Genomics 2024Quote: ... Paired-end reads of 150 bp were generated using TruSeq RNA Access sequencing chemistry on HiSeq X instrument (Illumina, San Diego, CA) by an external service provider (Macrogen Europe ...
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bioRxiv - Genomics 2024Quote: DNA concentration was normalized to 1 ng/μl and subjected to library preparation using Nextera XT DNA Library Preparation Kit (Illumina, CA, USA) according to the manufacturer’s instructions and sequenced with NextSeq550 using Mid Output Kit v2.5 (300 cycles ...