Labshake search
Citations for Illumina :
3401 - 3450 of 4662 citations for Genz 644282 CAS 529488 28 6 99% since 2020
Citations are collected from bioRxiv only, the total number of publications could be much larger.
-
bioRxiv - Genomics 2023Quote: Metagenomic DNA libraries were prepared at the time of the outbreak investigation in 2020 for Peach enrichments using the Illumina DNA prep method according to the manufacturer’s specifications (Illumina, CA, USA). Sequencing was performed on a NextSeq 550 with 2 × 150 cycles using the NextSeq 500/550 v2.5 High Output Kit (150 Cycles) ...
-
bioRxiv - Genomics 2023Quote: Metagenomic DNA libraries were prepared at the time of the outbreak investigation in 2017 for Papaya enrichments using the Nextera XT Library Prep according to the manufacturer’s specifications (Illumina, CA, USA). Sequencing was performed on a NextSeq 550 with 2 × 150 cycles using the NextSeq 500/550 v2.5 High Output Kit (150 Cycles) ...
-
bioRxiv - Cancer Biology 2023Quote: ... 150pg of cDNA was used to generate Illumina compatible sequencing libraries with the NexteraXT library preparation kit (Illumina, San Diego, CA) per manufacturer’s protocols ...
-
bioRxiv - Microbiology 2023Quote: ... using a modified quarter-volume protocol before sequencing on the MiSeq platform with a MiSeq Reagent Kit v3 (500-cycle; Illumina, CA) to generate 2×250 bp paired-end reads ...
-
bioRxiv - Microbiology 2023Quote: ... The extracted DNA was used for library preparation using the Nextera XT DNA library preparation kit (Illumina, San Diego, CA, USA). Libraries were sequenced using Illumina HiSeq X Ten (2 × 150-bp).
-
bioRxiv - Cancer Biology 2023Quote: ... paired-end sequencing was performed on an Illumina NovaSeq6000 sequencer using an S2 sequencing kit (Illumina Inc., San Diego, CA, USA) to an average depth of 45M reads per sample ...
-
bioRxiv - Evolutionary Biology 2023Quote: ... We then sequenced the entire pooled library on one lane of a NovaSeq6000 SP flowcell (2x150bp; Illumina, Inc. San Diego, CA) at the University of Iowa Institute of Human Genetics.
-
bioRxiv - Cancer Biology 2023Quote: ... paired-end sequencing was performed on an Illumina NovaSeq 6000 sequencer using 100 cycle sequencing kit (Illumina Inc., San Diego, CA) to a minimum read depth of 40 M reads/library ...
-
bioRxiv - Genomics 2023Quote: ... RNA libraries were prepared from 500 ng RNA samples using the TruSeq Stranded mRNA Kit (Illumina Inc., San Diego, CA, US) following the manufacturer’s instructions ...
-
bioRxiv - Genetics 2023Quote: ... cDNA libraries were prepared with the TruSeq stranded mRNA library prep Kit (cat# RS-122-2101, Illumina, San Diego, CA, USA). The resulting libraries were sequenced on a HiSeq 4000 (Genomics & Cell Characterization Core Facility ...
-
bioRxiv - Genomics 2023Quote: ... Libraries were pooled and sequenced (2x150nt) on one lane of a S1 flowcell on the NovaSeq 6000 (Illumina, San Diego, CA). FastQ files were generated and demultiplexed with the bcl2fastq v2.20 Conversion Software (Illumina).
-
bioRxiv - Immunology 2023Quote: ... Single cell libraries were prepared from 10,000 cells per pooled sample and sequenced with the NextSeq1000 (Illumina, San Diego, CA, USA) at a depth of > 30,000 paired reads per cell ...
-
bioRxiv - Microbiology 2023Quote: ... dual indices and adaptors were linked to the amplicon using the Nextera XT Index Kit® (Illumina, San Diego, CA, USA) following the thermal cycler program ...
-
bioRxiv - Microbiology 2023Quote: ... DNA libraries of each sample were prepared for whole genome sequencing (WGS) using a Nextera XT kit (Illumina, San Diego, CA). Briefly ...
-
bioRxiv - Evolutionary Biology 2023Quote: ... and paired-end sequences of 150 bp x 2 were generated using the Illumina HiSeq3000 System (Illumina, San Diego, CA, USA), targeting a yield of 2 gigabases data per sample ...
-
bioRxiv - Cell Biology 2023Quote: ... The RNA was subjected to prepare libraries using Illumina TruSeq RNA and DNA Sample Prep Kits (Illumina, San Diego, CA, USA). Library qualities were confirmed using Qubit 2.0 fluorometer (Life Technologies ...
-
bioRxiv - Plant Biology 2023Quote: ... Paired-end sequencing (2 × 75 bp) was performed with a NextSeq 550 System High OutPut kit (Illumina, San Diego, CA, USA). Raw reads are available at GSE227386.
-
bioRxiv - Microbiology 2023Quote: ... transcriptomic libraries were generated and sequenced on an Illumina NovaSeq 6000 (S4 flow cell, 100bp paired-end; Illumina, San Diego, CA). Raw data is available in the NCBI SRA under the accession number PRJNA857920 ...
-
bioRxiv - Plant Biology 2024Quote: ... the genomes of P161 and the parental −0.2 kb pVIN3_U_I::GUS lines were sequenced and compared by illumina Hiseq4000 platform (Illumina, San Diego, CA, USA) to find mutant-specific SNPs in P161 using LabGenomics services.
-
bioRxiv - Microbiology 2024Quote: ... Purified 16S rRNA gene sequences were analyzed using a MiSeq Reagent Kit v3 and MiSeq system (Illumina, San Diego, CA, USA). Raw 16S rRNA gene sequences were analyzed using QIIME 2 (ver.2021.4 ...
-
bioRxiv - Microbiology 2024Quote: Pooled single-cell libraries were sequenced across two lanes of an S2 flow cell on a NovaSeq6000 (Illumina, San Diego, CA) with 50 bp paired-end reads at a target sequencing depth of 50,000 reads per cell ...
-
bioRxiv - Cell Biology 2024Quote: ... a minimum of 14,5 million 2×100 bp reads were generated on the Illumina NovaSeq 6000 system (Illumina Inc., CA, USA), with the NovaSeq 6000 S4 Reagent Kit (200 cycles ...
-
bioRxiv - Immunology 2024Quote: ... 75 base pair Next Generation Sequencing was done on a P2 flow cell using the NextSeq 2000 (Illumina, San Diego, CA).
-
bioRxiv - Microbiology 2024Quote: ... Sequencing libraries were constructed from rRNA gene products according to the “16S Metagenomic Sequencing Library Preparation” protocol (Illumina, San Diego, CA) and sequenced on an Illumina MiSeq platform in 2 × 300 bp ...
-
bioRxiv - Microbiology 2024Quote: ... the gel-extracted products were pooled and prepared for sequencing via paired-end 2 × 150 bp iSeq (Illumina, San Diego, CA) sequencing in-house.
-
bioRxiv - Microbiology 2024Quote: ... and strand-specific transcriptome sequencing (RNA-Seq) libraries were constructed using the KAPA RNA HyperPrep kit (Illumina, San Diego, CA, USA). Sequencing was carried out on an Illumina NextSeq 500 instrument at the BPF Next-Gen Sequencing Core Facility at Harvard Medical School ...
-
bioRxiv - Microbiology 2024Quote: ... Libraries for all samples were prepared using the Nextera™ DNA Flex Library Prep Kit (Illumina Inc., San Diego, CA, USA), and the subsequent shotgun sequencing was executed on a NovaSeq 6000 system (Illumina Inc. ...
-
bioRxiv - Genetics 2024Quote: Total RNA from mouse glomeruli was sequenced on a HiSeq 4000 following standard workflow using NEBNext Ultra II RNA Library Preparation kit (New Englab Biolabs, MA)(Illumina, CA) and paired-end sequencing (Genewiz ...
-
bioRxiv - Plant Biology 2024Quote: ... Paired end read (2×150 bp) sequencing of quality libraries was performed on the NovaSeq 6000 V1.5 platform (Illumina, CA, USA). The libraries’ raw sequence read quality ...
-
bioRxiv - Genomics 2024Quote: ... Methylation was measured from 250 ng of bisulfite-converted DNA using the Illumina EPIC Beadchip (Illumina Inc, San Diego, CA, USA). Quality control and preprocessing for muscle tissue DNAm was carried out from IDATs in the Geroscience Core in the Butler Columbia Aging Center ...
-
bioRxiv - Genomics 2024Quote: ... Each strain had four short-read libraries prepared using the TruSeq Stranded mRNA Library Prep Kit (Illumina, San Diego, CA, USA), following the manufacturer’s recommendations ...
-
bioRxiv - Immunology 2024Quote: ... One library consisting of a total of 4 samples were pooled and sequenced on the NextSeq 2000 (Illumina, San Diego, CA) using a P3 100 cycle kit (Illumina) ...
-
bioRxiv - Genetics 2024Quote: ... Amplicon sequencing libraries were prepared as previously described54,70,71 and sequenced with a 1 x 75 single end read on a NextSeq instrument (Illumina, San Diego CA). Individual gRNA reads were extracted from FASTQ files with PoolQ and analyzed for enrichment using MAGeCK72 ...
-
bioRxiv - Microbiology 2024Quote: The whole genome sequence of the mink-derived H5N1 clade 2.3.4.4b virus was determined using the Illumina MiSeq sequencing platform (Illumina, San Diego, CA, USA). Briefly ...
-
bioRxiv - Genomics 2024Quote: ... RNA libraries for RNA-Seq were prepared using the Illumina TruSeq Stranded Total RNA Ribo-Zero Plant kit (Illumina, CA, US), and sequenced on the Illumina platform in paired-end mode and 150 bp read-length (Psomagen ...
-
bioRxiv - Genomics 2024Quote: ... Methylation was measured from 250 ng of bisulfite-converted DNA using the Illumina EPIC Beadchip (Illumina Inc, San Diego, CA, USA). Quality control and preprocessing for adipose tissue DNAm was carried out from IDATs in the Geroscience Core in the Butler Columbia Aging Center ...
-
bioRxiv - Cancer Biology 2024Quote: ... Uniquely indexed Illumina libraries generated by both methods were pooled and submitted for Illumina sequencing following the manufacture’s protocols (Illumina, Hayward CA.).
-
bioRxiv - Microbiology 2024Quote: ... Sequence libraries were prepared and pooled using the DNA prep and the NextSeq 500 mid-output reagent kits (Illumina, CA, USA). Illumina NextSeq 500 platform ...
-
bioRxiv - Genomics 2024Quote: ... the genomic DNA extracts were sequenced at an iSeq instrument generating 150 bp paired-end reads (Illumina, San Diego, CA, USA), and with PacBio RSII generating hifi long reads as described in the supporting information ...
-
bioRxiv - Microbiology 2024Quote: ... Amplicons were sequenced using Illumina’s v3 600-cycle (paired-end) reagent kit on a MiSeq (Illumina Inc., San Diego, CA, USA). Reads were demultiplexed based on the combination of index (CASAVA 1.8 ...
-
bioRxiv - Molecular Biology 2024Quote: ... the two pools were combined in equal molarity and diluted as required according to the NexteraXT protocol (Illumina, San Diego, CA).
-
bioRxiv - Microbiology 2024Quote: ... The PCR product library was quantitated and subjected to sequencing on an Illumina MiSeq sequencer (Illumina, San Diego, CA 92122 USA). HLA alleles and genotypes were called using the Omixon HLA Explore (version 2.0.0 ...
-
bioRxiv - Microbiology 2024Quote: ... The pooled DNA library was paired end sequenced at 2×300 bp using a MiSeq Reagent Kit v3 on Illumina MiSeq platform (Illumina, CA), at Baylor University.
-
bioRxiv - Molecular Biology 2024Quote: ... All samples were submitted to the TruSeq total RNA library construction for microbe with Ribo-zero kit previously to be sequenced using the NovaSeq 6000 (Illumina, CA) platform at Macrogen.
-
bioRxiv - Immunology 2024Quote: ... Bar-coded RNA-Sequencing (RNA-Seq) libraries were generated using the Illumina Stranded mRNA Library Prep Ligation kit (Illumina, CA, USA) and IDT for Illumina RNA UD Indexes (Illumina ...
-
bioRxiv - Immunology 2024Quote: ... The bar coded RNA libraries were pooled in equimolar ratios prior to sequencing using the Illumina NovaSeq 6000 (Illumina, CA, USA). Paired-end 102 bp reads were generated using either a NovaSeq 6000 S1 reagent kit v1.5 (200 cycles ...
-
bioRxiv - Immunology 2024Quote: ... Paired-end 102 bp reads were generated using either a NovaSeq 6000 S1 reagent kit v1.5 (200 cycles) (Illumina, CA, USA), SP reagent kit v1.5 (200 cycles ...
-
bioRxiv - Microbiology 2024Quote: ... Amplicon sequencing was performed using 460 bp paired-end sequencing on the Illumina MiSeq platform (Illumina Inc., San Diego, CA, USA) at FASMAC Co. ...
-
bioRxiv - Molecular Biology 2024Quote: ... The cDNA libraries of the radular tissues were prepared using TruSeq Stranded mRNA Sample Prep Kits (Illumina, San Diego, CA, USA).
-
bioRxiv - Genomics 2024Quote: ... The normalized libraries were sequenced as paired end 100bp reactions targeting 30 million reads/sample on the Illumina NovaSeq 6000 (Illumina, CA). The raw FASTQ files were processed through an in-house bioinformatics pipeline including adapter trimming by TrimGalore (v0.6.10 ...