Labshake search
Citations for Illumina :
3101 - 3150 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Microbiology 2024Quote: ... The fastq read files were generated and demultiplexed with the bcl2fastq v2.20 Conversion Software (Illumina, San Diego, CA).
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bioRxiv - Microbiology 2024Quote: ... Next generation sequencing library preparations were constructed following the manufacturer’s protocol (NEBNext® Ultra™ DNA Library Prep Kit for Illumina®). For each sample ...
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bioRxiv - Microbiology 2024Quote: ... and paired-end sequencing (300 bp × 2) on the MiSeq platform with the MiSeq Reagent Kit v3 (Illumina) were conducted as described previously [31] ...
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bioRxiv - Microbiology 2024Quote: ... NGS libraries were then constructed using the TruSeq Nano DNA Library Prep Kit (Illumina), which included steps of end-repairing ...
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bioRxiv - Microbiology 2024Quote: ... Sequencing was performed via MiSeq (Illumina). Libraries were diluted to 2 nM individually then pooled for denaturation and further dilution to a final concentration of 10 pM ...
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bioRxiv - Immunology 2024Quote: ... 75 base pair Next Generation Sequencing was done on a P2 flow cell using the NextSeq 2000 (Illumina, San Diego, CA).
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bioRxiv - Immunology 2024Quote: ... Transposition was performed directly on nuclei using 25µl tagmentation reaction mix (Tagment DNA Buffer #15027866, Tagment DNA Enzyme #15027865 from Illumina and Digitonin #G9441 from Promega). After pelleting the nuclei by centrifuging at 500g for 10 min ...
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bioRxiv - Microbiology 2024Quote: ... Library preparation was done with the Nextera XT kit (Illumina, Inc.), following the manufacturer’s instructions ...
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Promoting Human Intestinal Organoid Formation and Stimulation Using Piezoelectric Nanofiber MatricesbioRxiv - Bioengineering 2024Quote: ... a cDNA library was created and sequenced using an IlluminaHiSeq2000 (Illumina) with 20 million paired-end reads per sample.
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bioRxiv - Microbiology 2024Quote: ... or on a MiSeq (Illumina) (PE 300 bp ...
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bioRxiv - Microbiology 2024Quote: ... Sequencing was performed either at the IZKF Core Facility Genomics (Uniklinik RWTH Aachen) on an NextSeq platform (Illumina) (PE 150 bp) ...
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bioRxiv - Microbiology 2024Quote: ... and mixed with 40% PhiX Control v3 (Illumina) sequencing control library ...
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bioRxiv - Microbiology 2024Quote: ... Denatured sequencing pools were loaded onto MiSeq Reagent kit V2-300 (Illumina) and 2 × 70 bp sequence reads were generated with an Illumina MiSeq instrument with paired-end sequencing and index 1 sequencing primers spiked in the appropriate cartridge positions (12 ...
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bioRxiv - Microbiology 2024Quote: ... samples were sequenced by Illumina sequencing ...
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bioRxiv - Microbiology 2024Quote: ... diluted to 12 pM with HT1 hybridization buffer (Illumina) and mixed with 40% PhiX Control v3 (Illumina ...
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bioRxiv - Microbiology 2024Quote: ... We then used short-reads from Illumina to further improve the assembly with Polypolish v0.5.0 [28] ...
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bioRxiv - Microbiology 2024Quote: ... the V4 region within the 16S rRNA gene of bacterial DNA was amplified by PCR and sequenced using Illumina MiSeq platform (Illumina, San Diego, CA, USA). Raw sequences were processed following the Divisive amplicon denoising algorithm 2 (DADA2 ...
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bioRxiv - Microbiology 2024Quote: Identity of virus stocks was confirmed by next-generation sequencing using a MiniSeq platform (Illumina, Inc.; San Diego, CA, USA). In brief ...
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bioRxiv - Microbiology 2024Quote: ... Sequencing was performed on a MiSeq platform (Illumina, Inc.) with a 2 × 250-bp 500-cycle cartridge ...
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bioRxiv - Microbiology 2024Quote: ... and the 300-cycle iSeq Reagent Kit v2 (Illumina) according to manufacturer instructions ...
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bioRxiv - Microbiology 2024Quote: The IDAT files from Illumina® HumanMethylation EPIC arrays were analyzed using R (v4.2.1)32 and Bioconductor packages (v3.16) ...
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bioRxiv - Immunology 2024Quote: ... and sequenced on the Novaseq 6000 S4 (Illumina). Paired end sequenced reads were mapped to the mouse reference genome (GRCm39 ...
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bioRxiv - Microbiology 2024Quote: ... image analysis and base calling were conducted by the HiSeq Control Software (HCS) + RTA 2.7 (Illumina) on the HiSeq instrument.
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bioRxiv - Immunology 2024Quote: ... RNA libraries were sequenced on a NovaSeq 6000 (Illumina, San Diego, CA) using 75bp single-end sequencing ...
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bioRxiv - Immunology 2024Quote: ... Sequencing was performed using Illumina NextSeq 500 and NextSeq 500/550 High Output Kit v.2.5 (75 cycles) (Illumina, 20024906). Raw reads were analysed by the BlueBee Platform (Lexogen) ...
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bioRxiv - Immunology 2024Quote: ... Libraries were sequenced on a NextSeq 500 system (Illumina). Count matrices were generated using kallisto bustools against GRCh38109.
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bioRxiv - Immunology 2024Quote: Libraries for each sample were sequenced on a NextSeq550 75 Cycle High Output sequencing kit (Illumina Inc., Sunnyvale, CA, USA). For each library ...
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bioRxiv - Immunology 2024Quote: ... BaseSpace Sequence Hub (Illumina) was used for RNA seq analysis ...
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bioRxiv - Microbiology 2024Quote: ... and the complete genome was sequenced (paired-end 150 bases, NextSeq500, Illumina). An assessment of modifications was obtained both by the de novo assembly of the genome and mapping of the reads against the original genome (strain IP32953 ...
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bioRxiv - Microbiology 2024Quote: ... flanked by Illumina standard adapter sequences46 ...
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bioRxiv - Microbiology 2024Quote: ... and amplicon sequencing were performed using 300-bp paired-end sequencing on the MiSeq Reagent Kit v3 (Illumina Inc., San Diego, CA, USA) and Illumina MiSeq platform (Illumina Inc. ...
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bioRxiv - Microbiology 2024Quote: ... RNA-Seq libraries were prepared using the Illumina stranded total RNA prep ligation with Ribo-Zero plus kit (Illumina, 20040529) and IDT for Illumina RNA UD Indexes (illumina ...
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bioRxiv - Microbiology 2024Quote: ... using the Nextera XT Index Kit v2 Set B (Illumina). Samples were normalized and pooled together using a combination of the Qubit (Thermo ...
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bioRxiv - Immunology 2024Quote: ... The TruSeq Stranded Total RNA Library Prep Gold (Illumina, Inc, California, USA) was used in subsequent steps ...
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bioRxiv - Microbiology 2024Quote: ... Illumina sequence libraries were prepared using the Nextera XT DNA Library Preparation Kit (Illumina), followed by pooling and sequencing at the University of Minnesota Genomics Center ...
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bioRxiv - Molecular Biology 2024Quote: ... 500ng were used for Total RNA libraries preparation using Illumina kit (Illumina Stranded Total RNA Prep ...
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bioRxiv - Microbiology 2024Quote: ... Both short-read (Illumina NextSeq 500 platform, San Diego, CA) and long-read based (Oxford Nanopore ...
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bioRxiv - Microbiology 2024Quote: ... and tagmentation was processed using the Nextera DNA Flex library Prep kit (Illumina, USA). The sample concentrations were normalized in equimolar concentration at 1 nM ...
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bioRxiv - Microbiology 2024Quote: ... and libraries prepared with the TruSeq DNA PCR-Free Kit (Illumina) were sequenced in house on the Illumina MiSeq (2 × 250-base reads).
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bioRxiv - Microbiology 2024Quote: ... cDNAs were submitted to the Georgia Genomics and Bioinformatics Core facility for library preparation and sequencing using NextSeq 500 PE 150 High Output (Illumina). Sequencing of the cDNA library prepared from the control sample (laboratory reagent control ...
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bioRxiv - Cancer Biology 2024Quote: ... Libraries were sequenced using the Nova-Seq 6000 platform (Illumina).
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bioRxiv - Cancer Biology 2024Quote: ... using the NovaSeq 6000 S4 Reagent Kit (300 cycles) (Illumina). The loading concentration was 0.6-0.7 nM and a 1% spike-in of PhiX was added to the run to increase diversity and for quality control purposes ...
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bioRxiv - Cancer Biology 2024Quote: ... using the NovaSeq 6000 S2 Reagent Kit (200 Cycles) (Illumina). An average of 34 million paired reads were generated per sample and the percentage of mRNA bases per sample ranged from 89% to 93%.
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bioRxiv - Cell Biology 2024Quote: ... Indexed libraries were prepared using a TruSeq ChIP Sample Prep Kit (Illumina Inc., San Diego, CA, USA). The libraries were sequenced (single read ...
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bioRxiv - Genomics 2024Quote: ... The captured DNA was transposed with 2.5 μL Tn5 transposase (Illumina). The beads were then sequentially washed by Tween wash buffer (5 mM Tris-HCl [pH 7.5] ...
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bioRxiv - Genomics 2024Quote: ... to produce cluster counts appropriate for the paired-end sequencing using NovaSeq 6000 platforms (Illumina). The sequencing data was generated by targeting between 25-50K reads/cell ...
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bioRxiv - Genomics 2024Quote: ... Pooled index library 2.2nM (+10% Phix) sequenced on MiSeq (Illumina) with MiSeq v2 micro kit using paired end sequencing with 101-8-8-101 cycles ...
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bioRxiv - Genomics 2024Quote: ... Library was sequenced using Miseq (Illumina) and Miseq micro v2 kit and sequenced following manufacturers protocol spiked with 10% Phix control (FC-110-3001) ...
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bioRxiv - Immunology 2024Quote: ... FASTQ files were uploaded to BaseSpace (Illumina) and aligned to hg19 with the RNA-Seq Alignment (STAR ...
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bioRxiv - Microbiology 2024Quote: ... and passed to paired-end sequencing (2 × 150 bp) on a NovaSeq6000 platform (Illumina). On average ...