Labshake search
Citations for Illumina :
3251 - 3300 of 10000+ citations since 2019
Citations are collected from bioRxiv only, the total number of publications could be much larger.
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bioRxiv - Immunology 2024Quote: Base calls generated by the Illumina Realtime Analysis software were converted into BAM and vcf files using the DRAGEN somatic pipeline on Illumina BaseSpace (Illumina, v3.9.5). The quality control ...
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bioRxiv - Evolutionary Biology 2024Quote: ... SNP variants found in the assemblies matched those called from Illumina sequencing data ...
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bioRxiv - Immunology 2024Quote: ... A dual indexed cDNA library was then prepared with use of Nextera XT DNA Library Prep Kit (Illumina). Each library was quantified ...
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bioRxiv - Evolutionary Biology 2024Quote: ... RNA was fragmented by hydrolysis for 2 minutes at 94° and cDNA synthesis was performed with random hexamers following the TruSeq Stranded RNA kit protocol (Illumina). To achieve strand specificity ...
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bioRxiv - Evolutionary Biology 2024Quote: ... and libraries prepared using the Nextera DNA Flex Library Preparation Kit (Illumina), both using recommended protocols ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Sequencing libraries were constructed using a Nextera XT DNA library preparation kit (Illumina, FC-131-1024) and a Nextera XT Index kit (Illumina ...
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bioRxiv - Immunology 2024Quote: ... The pooled libraries were denatured and neutralized before loading to the NovaSeq 6000 sequencer for 100b paired-end sequencing (Illumina). Approximately 30–40 × 106 reads per library were generated ...
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bioRxiv - Evolutionary Biology 2024Quote: ... Ribosomal RNA was depleted using the RiboZero Plant Kit for RNA-Seq (Illumina) according to manufacturer’s instructions ...
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bioRxiv - Evolutionary Biology 2024Quote: ... prepared our libraries using a Nextera DNA Flex Library Preparation Kit (Illumina), and sequenced them as multiplexed libraries on a Hiseq X platform (150bp ...
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bioRxiv - Immunology 2024Quote: ... Sequencing was carried out using a Novaseq 6000 SP Reagent Kit v1.5 (Illumina, San Diego, CA, USA; 100 cycles). FASTQ sequence data were aligned to a custom hg38 (GRCh37 ...
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bioRxiv - Cell Biology 2024Quote: ... mRNA libraries were constructed using Truseq kits from Illumina and were sequenced on Illiumina Nextseq P3 (paired-end ...
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bioRxiv - Cell Biology 2024Quote: ... Pelleted cells were transposed using Tagment DNA TDE1 Enzyme and Buffer Kit (Illumina, # 20034197) for 60 min at 37 °C with shaking ...
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bioRxiv - Cell Biology 2024Quote: ... Equimolar ratios of the obtained libraries were pooled and sequenced on a HiSeq 2500 platform (Illumina). Primers used for library amplification are listed in the Key resource table.
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bioRxiv - Cell Biology 2024Quote: ... RNA-seq libraries were sequenced on a NextSeq 2000 platform (Illumina, Inc.) with a NextSeq 1000/2000 100 cycle P2 kit (Illumina ...
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bioRxiv - Cell Biology 2024Quote: ... with a NextSeq 1000/2000 100 cycle P2 kit (Illumina, cat no. 20046811) using 66bp paired-end ...
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bioRxiv - Evolutionary Biology 2024Quote: ... followed by end reparation and adaptor ligation according to the manufacturer’s protocol (Illumina, San Diego, CA). Finally ...
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bioRxiv - Cell Biology 2024Quote: ... pooled and spiked in with PhiX Control v3 (Illumina). Libraries were sequenced on an Illumina NovaSeq 6000 using an S2 Reagent Kit v1.5 (#20028315 ...
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bioRxiv - Cell Biology 2024Quote: ... Paired-end (2 × 36 bases) sequencing was performed using a NextSeq500 platform (Illumina, San Diego, CA, USA). The FASTQ files were imported into the CLC Genomics Workbench (version 10.1.1 ...
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bioRxiv - Cell Biology 2024Quote: ... and the Illumina NovaSeq 6000 sequencing system (Illumina Inc., USA).
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bioRxiv - Cell Biology 2024Quote: ... Then library preparation was conducted (Illumina Nextera DNA Flex). WGS was conducted on Illumina NovaSeq6000 with PE150 targeting 30x coverage per sample ...
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bioRxiv - Plant Biology 2024Quote: ... and sequencing on the NovaSeq6000 (Illumina).
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bioRxiv - Plant Biology 2024Quote: ... We prepared RNA-Seq (Smart-seq2; Illumina, San Diego, USA) and nanoPARE libraries from 5 ng total RNA according to the nanoPARE library preparation protocol using the nanoPARE library preparation protocol (Schon et al ...
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bioRxiv - Plant Biology 2024Quote: ... nanoPARE and mRNA libraries using an Illumina NextSeq 550 instrument (Illumina, San Diego, USA) at the University of Delaware DNA Sequencing and Genotyping Center.
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bioRxiv - Plant Biology 2024Quote: ... The protocol for library preparation with the Illumina TruSeq Stranded mRNA kit (Illumina Cat no: 20020595, Illumina, USA) was adapted for automation on the Agilent NGS Bravo workstation (Agilent Technologies ...
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bioRxiv - Plant Biology 2024Quote: ... Libraries were sequenced using an Illumina Novaseq6000 sequencer (Illumina, USA) with 150 bp pair-end reading ...
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bioRxiv - Plant Biology 2024Quote: ... Library preparation with the Illumina TruSeq Stranded mRNA kit (Illumina Cat no: 20020595, Illumina, USA) comprised the following ...
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bioRxiv - Plant Biology 2024Quote: ... Library preparation with the Illumina TruSeq Stranded mRNA kit (Illumina Cat no: 20020595, Illumina, USA) comprised the following ...
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bioRxiv - Developmental Biology 2024Quote: ... and libraries were sequenced as 50 bp single-end reads on a Hiseq 4000 sequencer (Illumina, San Diego, California, USA), with about 90 million reads in total ...
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bioRxiv - Developmental Biology 2024Quote: ... Pooled and size-selected sequencing libraries were sequenced on an Illumina NextSeq 550 instrument using a High Output kit (Illumina) with 38-bp paired-end reads setting.
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bioRxiv - Evolutionary Biology 2024Quote: ... followed by Illumina sequencing (see section Illumina barcode sequencing).
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bioRxiv - Evolutionary Biology 2024Quote: ... followed by Illumina sequencing (see section Illumina barcode sequencing).
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bioRxiv - Evolutionary Biology 2024Quote: ... followed by Illumina sequencing (see section Illumina barcode sequencing).
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bioRxiv - Genetics 2024Quote: ... The resulting guide and expression libraries were sequenced on a Novaseq 6000 (Illumina).
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bioRxiv - Genetics 2024Quote: ... 100μl of nuclei were used for the transposition reaction which was performed in 105μl with 10μl of transposase (Illumina, 20034197). The library was sequenced on an Illumina NovaSeq 6000 System on an SP flow cell with paired-end 50-bp reads.
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bioRxiv - Developmental Biology 2024Quote: ... one ug of RNA was used to make libraries using the TruSeq Stranded mRNA Library Prep Kit (Illumina# 20020595). Libraries were sequenced on the NovaSeq 6000 using an S4 flow cell at PE 2X100 at the Genomics Core of Weill Cornell Medicine.
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bioRxiv - Developmental Biology 2024Quote: ... RNA sequencing was performed using the PE100 strategy (HiSeq 2500, Illumina). Sequencing data were analysed as previously reported (Liu et al. ...
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bioRxiv - Developmental Biology 2024Quote: ... and TruSeq RNA Single Indexes Sets A and B (Illumina Cat. No. 20020492 and 20020493) and purified using the Ampure XP bead-based reagent (Beckman Coulter ...
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bioRxiv - Developmental Biology 2024Quote: ... and sequenced as 100-bp single reads on the NextSeq 2000 (Illumina). Following sequencing ...
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bioRxiv - Developmental Biology 2024Quote: ... using the Nextera XT DNA Library Preparation Kit (Illumina, FC-131-1096) at 1/8th reaction volumes (except for Cas13d control and bckdk mRNA KD samples where 1/4th of the reaction volume were used ...
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bioRxiv - Developmental Biology 2024Quote: ... Paired-end reads (2×150 nt) were generated by HiSeq 4000 (Illumina) at the UCSF Center for Advanced Technology (CAT ...
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bioRxiv - Developmental Biology 2024Quote: ... Verified Libraries were pooled and sequenced using NovaSeq 6000 from Illumina.
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bioRxiv - Developmental Biology 2024Quote: ... and single-end reads (50 nt) were generated by HiSeq 4000 (Illumina) at the UCSF CAT Facility ...
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bioRxiv - Developmental Biology 2024Quote: ... DNA libraries were constructed using the TruSeq ChIP Sample Preparation Kit (Cat #, IP-202-1012; Illumina, San Diego, CA), and single-end reads (50 nt ...
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bioRxiv - Developmental Biology 2024Quote: ... complementary DNA libraries were prepared using the TruSeq Stranded mRNA kit (Illumina), and each library was sequenced to an approximate depth of 30 million reads on an Illumina HiSeq 4000 instrument ...
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bioRxiv - Developmental Biology 2024Quote: ... and the samples were sequenced using the platform HiSeq 2500 (Illumina) to an average output of 30 million 50bp single end reads per sample at CRG (Center of Genomic Regulation) ...
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bioRxiv - Developmental Biology 2024Quote: ... at 1/8th reaction volumes (except for Cas13d control and bckdk mRNA KD samples where 1/4th of the reaction volume were used) paired with IDT for Illumina DNA/RNA UD Indexes Set A (Illumina, 20027213), and purified using the Ampure XP bead-based reagent (Beckman Coulter ...
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bioRxiv - Developmental Biology 2024Quote: ... Paired-end sequencing was carried out either on a NOVA-seq 6000 or HiSeq 1500 sequencer (Illumina).
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bioRxiv - Developmental Biology 2024Quote: ... Library was sequenced on the Illumina HiSeq 1500 Sequencer (Illumina, USA). Cell Ranger v2.1 was used to de-multiplex raw base call (BCL ...
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bioRxiv - Developmental Biology 2024Quote: ... Cell Ranger v2.1 was used to de-multiplex raw base call (BCL) files generated by Illumina sequencers into FASTQ files ...
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bioRxiv - Genetics 2024Quote: ... Genomic DNA was fragmented and simultaneously tagged so that the peak size of the fragments was approximately 500 bp using the Nextera® transposome (Illumina Inc., San Diego, CA). After purification of the transposome using DNA Clean & ConcentratorTM-5 (Zymo Research ...